Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3316 ATGTCTTCTCTCAATCATGATGATAATGCTCATCACGTAGTTGAGGACTGCATGGGAGTCCTCAAACTCTATAGTGACGGAACCGTCATCCGTTCCAACATCCAATTCAAACCCATCAATCAAAACAACGAAGACAACAACCTCGTACTTTTCGAAGATCACCTTTTCAACAAGAAACACAACCTCCATCTTCGTCTCTACAAACCCACCACTACTTCCACCAACTTGCCAATCATCTTCTTCCTTCATGGTGGAGGCTTTTGTTTCGGCTCGCGAGCCTGGCCTCACACCCATGCCTTCGGCATCCGTCTCGCCACTTCTCTACATGCCTACGTGGCCACGCCGGACTACCGGTTGGCCCCTGAGCACCGGCTTCCAGCTGCGGTCGATGATGCAGTAGAGGCGGTGAGATGGATGCAGAGGAAGGGATTACATGGAAGTGGTGACACGTGGATCGGAGATTGCATTGACTTTGACCGGGTCTTCATCATGGGGGACTCTAGTGGAGGTAACATAGCGCACCAGCTTGCGGTCCGGTTTGGTTTGGGTTCGAGAGAAATGGAGCCGGTTCAGGTACGAGGTTACGTGTTGCTGGCGCCGTTTTTCGGTGGGGAGGCTCGGACCAAGTCCGAGGAGGGACCGCCGGAGCAAATGCTGAATCTGGATATGCTAGACAGATTTTGGAGGCTGTCAATCCCTGTTGGAGAGAACAGAGACCACCCATTAGCAAATCCATTTGGACCTAGAAGTCCAAACCTTGAAGATGTAGAACTTGACCCTATTCTGGTGATAGTAGGTGGCAATGAATTATTGAAGGATAGGGCACAGGACTATGCAACAAGGTTAAAGGAATTAGGGAAGAACATTCAGTACATTGAATTTGAGGGGAAGGAACATGGTTTCTTCACTCATAATAATGATCCACACTCAGAAGTTGAAGAAGAGGTCATGCAATTAATTAGGCAATTCATGCTCCAAAATTCCAATTAG 990 0.4859 MSSLNHDDNAHHVVEDCMGVLKLYSDGTVIRSNIQFKPINQNNEDNNLVLFEDHLFNKKHNLHLRLYKPTTTSTNLPIIFFLHGGGFCFGSRAWPHTHAFGIRLATSLHAYVATPDYRLAPEHRLPAAVDDAVEAVRWMQRKGLHGSGDTWIGDCIDFDRVFIMGDSSGGNIAHQLAVRFGLGSREMEPVQVRGYVLLAPFFGGEARTKSEEGPPEQMLNLDMLDRFWRLSIPVGENRDHPLANPFGPRSPNLEDVELDPILVIVGGNELLKDRAQDYATRLKELGKNIQYIEFEGKEHGFFTHNNDPHSEVEEEVMQLIRQFMLQNSN* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3316 329 Coils Coil 268 288 - -
Amo12g3316 329 Gene3D alpha/beta hydrolase 20 328 IPR029058 -
Amo12g3316 329 SUPERFAMILY alpha/beta-Hydrolases 13 324 IPR029058 -
Amo12g3316 329 Pfam alpha/beta hydrolase fold 79 302 IPR013094 GO:0016787
Amo12g3316 329 PANTHER CARBOXYLESTERASE 15-RELATED 10 325 - -
Amo12g3316 329 PANTHER ARYLACETAMIDE DEACETYLASE 10 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3316 Amo-Chr12 122235789 122239568 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g3316 2 307 Carbohydrate Esterase AT5G16080 34.062 1.41e-56 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g3316 - - gmx:100805368 472.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g3316 12 122235789 122239568 Amo12g3316 12 122235789 122239568 ECH
Amo06g0416 06 5577046 5582154 Amo12g3316 12 122235789 122239568 PCT
Amo12g3316 12 122235789 122239568 Amo06g0416 06 5577046 5582154 PCT