Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3311 ATGGCTGCAGCACTTGTTGGTGGAGCTGTTCTGTCTTCCACTTTTAGTGTTATTTTTAACAGGATGTCCTCACCTGAAGTTGCCAACTGGATCAAAGGGAAGAAGCTTACCCAGAAGCTGCTTGAAAGGTTGAAGACCAATCTTTATGCTGTTCAAGCCTTTCTCATTGATGCTGAGCAGAAGCAGATCAAGGAGAGAGCTGTCAAGGACTGGCTGGATAGTCTCAAAGCTGCTATGTATGTTGCTGATGACTTGCTGGATGATGTCTTCACCAAAGCTGCCACTCAGAAGGATTCAGGTACCTTCTTCTCTCGTTTTCTCAATTCGCAAGATAGGGAGATAGCAAACAGGATGGAGGAAATCATTGATAGGATAGAGTCTATTGTGAAGCAAAAAGACACTCTTGGTCTCACAAAAATTCCTAAGGAGGACATGTCATGGAGGATCACAACATCTCTCGTTGGAAGTTCTAATATATATGGTAGGGAAAAAGACAAGGAGGCCATAGTGAAAATGTTGTTGAATGATGATGACACTGGTGATGGTGATATACCTGTGATTTCCATTGTGGGTATGGGCGGAATTGGAAAGACTACTTTGGCCCAATTGATTTACGATGACGATAAAGTGGAGAACTACTTTAATTTTCGAGGTTGGGTTTGTGTGTCCGAAGAGTTTGATGTTATTAAGGTCACCAAGACTATAATTGAGGCAATAACAAAGAGTCCTTGTAACTTGAATGATTTGAATTTACTTCAGCATGAGTTAAAGAAGAGATTATCCGAAGGGAAATTCTTTGTGGTTTTGGACGATGCATGGAATGAAAATTATGGTAGTTGGAATAGGCTTCTAAAACCTTTTCAGAATGGGGTTAAGGGGAGCAAAATTCTCATAACTACTAGAAGTACAAAGGTGGCTTCTGCGGCACAGACTATTTCATCTTATGAACTAAGTTTATTGTCGGATGAAGATTGTTGGTTAATATTTTCAAAACATGCATGTCTTTCCACTTACTCTATGGAGAATCAAACTTTGGAAAAGCTCGGCAGAGATATTGTAAAGAAGTGTCATGGCTTGCCCTTGGCAGCTCAAGCACTAGGAGGCTTATTGCATGGAAATTCTGATGTCGAGCATTGGAATCGTATATTGAAGAGTGAGATTTGGGAATTGTCCGAAGATGAGAGCGAACTCATTCCAGCATTAAGAATCAGTTACTACTATCTTCCTTCATGTCTGAAAGATTGTTTTGTTTATTGTTCGTTGTATCCAAAGGATTATGAATTTGATAAAGATGAATTGATCTTGTTATGGATGGCTCAGAATTTTTTACAACCAGTTGGGAAAAAGACTCCAGAAGAAGTTGGTGATAAATATTTTGATGAATTAATTGCGAGATCATTTTTGCAACCTCATAGTACCTGGAAAAATAAATTTGTGATGCATGATCTCGTGCATGATTTGGCAATGATGTTTGCTGGAGATTTCTATTTTAGAGCAGAAGAGATTGAGAATACAGTTGAGATTGATATTAAAACTCGTCATTTGTCCCACAATGCTAAAGGCAATTATCCAATCTCAAAACTGTTGGGAGTTTGTGACGGAATAAAACATATAAGGACATTTCTTGAAATCAATTTGGAGTTATGGATCCCATTTAACATGGAAAACGCACCTTGTATCTTGTTGTCACAGTTGAAGTACCTGAGAGCGTTGTCGTTCCACGGCTTTCCTCTTGAGTCAGTACCTGATTCAATAGGTGAGTTGATTCATTTGCGTTACTTGGATCTGTCCAAGACCAACATTGTGACATTGCCGGAGTCATTGGGTAACCTCTATAATTTGCAGACCTTGAAGTTGTATTCCTGCTATAATCTGAAAATGCTACCTGTTGGCATGAAAGGTCTTGTAAATTTGCGCCATCTTGATATTAGAGGGACTCAGTTGCATGAGATGCCAAAAGGCATGAGCAAGTTGAAAAATTTGCAGTTTTTAAGCGACTATGTTGTTGGGAAACATGAAGAGAACAAGATCACAGAATGGGGAGCACTAGCAGATCTACACGGATCAATTTCCATTGGCAAATTGGAGAATGTGGTGAACAGCAGTGAAGCTTTGGAGGCAAGAATGTCCGATAAGGATGGCATTGATTCTATAACGTTAATTTGGTCATCGAATGAAGAGGAGAATACAGTTGATTCCCAGATGGAAAGAGATATACTTGACAAGTTACGACCTCACACTAATTTGAAAGGGTTATATATCTCTGGTTACAGGGGTACAACCTTTCCAGATTGGTTGGGACATTCTTCCTACCGCAACATCACCAAAATAATGCTGGATGGTTGCAGGAATTGTTGTATGCTTCCTTCACTTGGACAATTGCCCTCTTTGAAGCACCTTGAAATTTCAAAATTTGAAAGTGTGGGGATTGTGGGTGCTGAGTTTTACTTTTACCAGAACGATGAATCTTGTGTGAAGACACCACCATTTCAAAAGCTTGAAACTCTTTTGTTTAAGTCAATGCCTTGCTGGAAGGAGTGGCGTTCAATGGTGTTGAATGCATTTCCTCGACTTTGGCATCTCACCATAAGTGAGTGTCCGATGTTGAGAGGAGATTTGCCCATTCATCTACCATCTTTGCAATCACTTCAGATTGACAAGTGCGATGAGCTGAGTTGTTGTGTTCCAAGGGCACCTGCGATTACCAGTCTTTCAATTTCAGGAAAGCATCTAGTGGGGTCCGTGGTGGAGGCCATTACCAACACGCAACTGACTTGCCTCACTTCTTTATCCATCTCAGATTGTTCCTCCCACATATGGTTTCCAGTGAGTGCTATTCCTCTATCACTACAAGAGTTGACGATCGAGAGTTGTGGAGAATTAGAATTCGAAATGGATGGGCAACATCACTCGCTGCAGAAACTATCAATACAGAACAGCTGTGATTCACTTACATCCTTCTCGTTGTTGGATGCCTTTCCGAATCTCGTGCGTGTTGAAATCGAGAAATGTGAAAAGATGGAGTCAATTGTGGTGTCACGCTCCCTTGTTTCTCTCCGATATTTATGGATCAAGCATTGTGGGAGTATGAAATCCGTGTCGACGATATGGATGGCAGCACCTCAGCTAGAGCGTCTCTCATTAGTGGGTTGCCCAGAGATCGATTTGTGTGCTCCAGGGGTTCCACACCGTAGCCTCAGATATCTTGGAATCAGCTACTGCGAGAAACTAGTGAGCACTGCAGCATTCATGAATTCACAATTTCAAGGGCTTATTCGTCTTTCCATTCATGGTGAATACGGCGAGAGTGTGAAGTCCCTCCCAAAGGAAGGTTGGTTGCCTGCCTCCCTTGAGTCTCTCACACTGGAAGGCATTAAAAGTGTGGAGACGTTGGAATGCAAGGGACTTGCCCACCTCACCTCCCTCCAACAATTATCTATTAATGAATGTCCCAAGTTGGAGAATATGGAGGGTGAAAAGCTGCCTGCCTCTCTAAAACAACTCAGCATCTATAAAAGCCCTTTGCTGGGCAATCGATGTCAGAAGAAGGATCCACAGCTTTGGCCCAAAATCTCCCACATCCGCGCCATTCAAGTTGATAGCAGATGGATTTGGTAA 3618 0.4157 MAAALVGGAVLSSTFSVIFNRMSSPEVANWIKGKKLTQKLLERLKTNLYAVQAFLIDAEQKQIKERAVKDWLDSLKAAMYVADDLLDDVFTKAATQKDSGTFFSRFLNSQDREIANRMEEIIDRIESIVKQKDTLGLTKIPKEDMSWRITTSLVGSSNIYGREKDKEAIVKMLLNDDDTGDGDIPVISIVGMGGIGKTTLAQLIYDDDKVENYFNFRGWVCVSEEFDVIKVTKTIIEAITKSPCNLNDLNLLQHELKKRLSEGKFFVVLDDAWNENYGSWNRLLKPFQNGVKGSKILITTRSTKVASAAQTISSYELSLLSDEDCWLIFSKHACLSTYSMENQTLEKLGRDIVKKCHGLPLAAQALGGLLHGNSDVEHWNRILKSEIWELSEDESELIPALRISYYYLPSCLKDCFVYCSLYPKDYEFDKDELILLWMAQNFLQPVGKKTPEEVGDKYFDELIARSFLQPHSTWKNKFVMHDLVHDLAMMFAGDFYFRAEEIENTVEIDIKTRHLSHNAKGNYPISKLLGVCDGIKHIRTFLEINLELWIPFNMENAPCILLSQLKYLRALSFHGFPLESVPDSIGELIHLRYLDLSKTNIVTLPESLGNLYNLQTLKLYSCYNLKMLPVGMKGLVNLRHLDIRGTQLHEMPKGMSKLKNLQFLSDYVVGKHEENKITEWGALADLHGSISIGKLENVVNSSEALEARMSDKDGIDSITLIWSSNEEENTVDSQMERDILDKLRPHTNLKGLYISGYRGTTFPDWLGHSSYRNITKIMLDGCRNCCMLPSLGQLPSLKHLEISKFESVGIVGAEFYFYQNDESCVKTPPFQKLETLLFKSMPCWKEWRSMVLNAFPRLWHLTISECPMLRGDLPIHLPSLQSLQIDKCDELSCCVPRAPAITSLSISGKHLVGSVVEAITNTQLTCLTSLSISDCSSHIWFPVSAIPLSLQELTIESCGELEFEMDGQHHSLQKLSIQNSCDSLTSFSLLDAFPNLVRVEIEKCEKMESIVVSRSLVSLRYLWIKHCGSMKSVSTIWMAAPQLERLSLVGCPEIDLCAPGVPHRSLRYLGISYCEKLVSTAAFMNSQFQGLIRLSIHGEYGESVKSLPKEGWLPASLESLTLEGIKSVETLECKGLAHLTSLQQLSINECPKLENMEGEKLPASLKQLSIYKSPLLGNRCQKKDPQLWPKISHIRAIQVDSRWIW* 1206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3311 1205 PRINTS Disease resistance protein signature 259 273 - -
Amo12g3311 1205 PRINTS Disease resistance protein signature 186 201 - -
Amo12g3311 1205 PRINTS Disease resistance protein signature 356 370 - -
Amo12g3311 1205 PRINTS Disease resistance protein signature 875 891 - -
Amo12g3311 1205 Gene3D Ribonuclease Inhibitor 552 700 IPR032675 -
Amo12g3311 1205 Gene3D Ribonuclease Inhibitor 1063 1181 IPR032675 -
Amo12g3311 1205 Gene3D Ribonuclease Inhibitor 897 1062 IPR032675 -
Amo12g3311 1205 SUPERFAMILY L domain-like 899 1189 - -
Amo12g3311 1205 CDD RX-CC_like 41 128 IPR038005 -
Amo12g3311 1205 Pfam Rx N-terminal domain 11 101 IPR041118 -
Amo12g3311 1205 Gene3D Ribonuclease Inhibitor 715 896 IPR032675 -
Amo12g3311 1205 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 419 IPR027417 -
Amo12g3311 1205 Pfam NB-ARC domain 162 385 IPR002182 GO:0043531
Amo12g3311 1205 Gene3D - 404 490 IPR036388 -
Amo12g3311 1205 Gene3D - 27 134 - -
Amo12g3311 1205 SMART LRR_typ_2 588 611 IPR003591 -
Amo12g3311 1205 SMART LRR_typ_2 635 658 IPR003591 -
Amo12g3311 1205 SUPERFAMILY L domain-like 564 958 - -
Amo12g3311 1205 PANTHER OS05G0414200 PROTEIN 32 937 - -
Amo12g3311 1205 Gene3D - 146 314 IPR027417 -
Amo12g3311 1205 Gene3D - 319 403 IPR042197 -
Amo12g3311 1205 PANTHER DISEASE RESISTANCE PROTEIN RP 32 937 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3311 Amo-Chr12 122168859 122173555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g3311 183 652 WRKY Transcription Factor Family AT5G45050 22.411 6.40e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g3311 - - ahf:112728733 1650.57