Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3310 ATGGCTGAAAAACTTTATGGTGGAGCTTACCTCTCTCCCTTTGTTAATACTGTTTTGGGCAACCTGTCTTCAATACTTGAAGATGACTCTGTCCTCTATGGAAACTACTCTGCCTTAGAGTTGCTTAAAAGGTTGCGAAACTGTCTTTGTGTTGTTAGATCTGTGCTTGATGATGCTGAGTACAAACAGTTCACTGACAAGGAAGTCAAGAAGTGGCTTGTTGATCTTCAAGATGCTCTTTATATGGCTGATGACTTGCTCGATGAACTCTCCACTAAAGCCGCTGTCGCTGCTACTCCAAGTGATCCAGGTAACTCTTCCTCTTGGTCTCGACTTGTTGATTCATATATTGAAGATACTGGTGATATGGAGAAAATAGTTCGAAGACTGGACTCTGTTGTAGAACGCAAAGATTCACTTTGTCTGGAGAAGAGTGCCAAGTTGGACATGTCATGGAGAAGTCCATCCACATCTCTCCTTGAACCATCGGAGATATGTGGCAGGAAAGAAGACAAGGAGGCCATACTGAAACTGTTGTTGGATGATGATGATGCTGCTGATGGTGATTTATCTGTCATTCCCATTGTGGGCATGGGCGGAATAGGAAAGACTACTTTGGCCCAATTGCTTTACCACGATGACAAAGTGAAGGACAATTTTGATTTTCAAGGTTGGGTTTGCGTGTCAGAAGAGTTTGATGTTGTCAAGGTTACTAAGACTATAATCGAGGCAATAACTTCGAAATCTTGTAACTTGACAGATTTGAATTTACTTCAGCTTGATTTAAAGGAAAAGTTGTCGAGGCAAAAGTTCTTCATTGTCTTGGACGATGTCTGGAATGAAATTTATGATGATTGGAATAAGCTTCTAAAACCTTTTCAGAAAGGGGTTAAGGGAAGTAAAATTCTTATAACTACGAGAAACAAAAATGTGGCTTCTTTAGTGCAGACTGTTTCACCTCATGAGCTACGATCACTGTCCGATGAAGATTGTTGGTTGGTGTTTTCAAAGCATGCACGTCTGTCAATAGTGTCTGTGGAGAATCCAACCCTGGAAAAAATCGGCAGAGATATCGTAAAGAAGTGTGATGGATTGCCCTTGGCAGCTCAAGCCCTTGGAGGCATATTGCGTGGAAATTCTGATATCAGATATTGGAATCATTTACTGAAGAGTGAAATCTGGGAACTCTCCAATGACAGAATAAATGTTGTTCCAGCGTTAAGGATAAGTTATTATTTTCTTCCTTCATATTTGAAGGAGTGCTTTRTTTATTGTTCCTTGTATCCCAAGAACTATGAATTTAGCAAGGATGAATTGATATTGTTATGGATGGCTGAGAATTTTTTGCAACCAGTAGGTAAAAAGACCATGGAAGAAGTTGGCGGTGAATGCTTTGATGAATTAATTGCGAGATCATTTTTGCAACCTCACAGAACCCGTGAAAAGAATTTTGTGATGCATGATCTTGTTCATGATTTAGCAATGACATGTGCTGGAGAATTCTATTTCAGAGCTGAAGATCTTCGGAATGCAATTGAGGTTGATACTAAAGCTCGTCATTTGTCACATAACGCCAAAGGCAATTATCCATTGTCAAATCTTTTGGGAGTTTGTGATAGAGTAAAACATACGAGGACATTTATTGAAATCAATTTGAACGAGTGGATTCCATTCAATATGGAAAATGCAGCTTGTATTTTGTTGTCACAGTTGAAGTACATGAGGGCTTTGTCGTTGAAAAACTTTCCTCTTGTGTCAGTGCCTGATTCAATAGGTGAGTTGATTCATTTGCGTTACTTGGATCTSTCYGRGACCKACATTGTKACATTGCCGGAGTCATTGGGTAACCTGTATAACTTGCAGACCTTGAAGTTGTATTGGTGTAGAAATCTGAAAATGCTACCTGTTTGCATGAAAGACCTTGTAAATTTGCGCCATCTTGATATTAGAGAAACTCGTGTGCACGTGATGCCGAAAGGCATGAGCCAGTTGAAAAATTTGCAGTTTTTAAGCAATTATGTTGTTGGGAAGCGTGAAGAGAACAAGATSACAGAATTGGGAGCACTTRCAGATCTACAGCAATCTATTTCCATTGMCRRKTTGGAGAATGTGGTGAACAGCAGTGAAGCTTGGATGGCAAGAATGTTTGATAAGGATGGCATTTGTTCTCTGAAGTTGAGTTGGTTGCCAGATGAAGATGAGAATATAGTTGATTCCCAAACAGAAAGAGATATACTCGACAAGTTACAACCTCACACTAATTTGAAAGAACTAGAAATCCGGGGTTACAGGGGTACAACATTTTCAGATTGGTTGGGAAGTTCTTCCTACCGCAACATCACATATGTATGGCTGGATGGCTGCAGGAATTGTTGTATGCTTCCTTCACTTGGACAATTGCCCTCTTTGAAGCACCTTACAATTTTAAATTTTGAAAGTGTGGAAATTGTGGGTGCTGAGTTTTACTTTTACCAGAACGATGAATCTTGTTTGGAGACTCCATTTCCAAAGCTTGAAAGTCTTTTGTTTTCATCACTGCCTTGCTGGAAGGAGTGGCGTTCAATGGAGTTCAATGCATTTCCTGGACTTAGGGAGCTTACCATAATGGAGTGTCCCATGTTGAGAGGAGATTTGCCAAATCAACTTCCATCTTTGCAATCACTTCAGATTATGGGTTGCGATGAGCTGAGTTGTTGTGTTCCAAGGGCTCCTGCGATTACCAGTCTTTCAATTTCAGGAAAGCATCTGGTGGGGTCCGTGGTGGAGGCCATTACCAACACGCAACTGAGTTGCCTCACTTCTTTACGCATCTCAGATTGTTCCTCCCACATATGGTTTCCAGTGAGTGCTATTCCCCCATCACTACAAGAGTTGAGGATACGGGATTGCAGAAAATTAGAATTCGAAATGGATGGCCAACACCACTCACTTCAGGAACTATACATACGTAGCAGCTGTGATTCACTTGCGTCCTTCTCCTTGTTGGATTCCTTTCCGAATCTCGTGCGTGTTGACATCAAGTACTGTGGAAACATGGAGTCTATTGTGGTGTCACGCTCTCTTTCATGTCTCCGTTATTTATGGATCAAGCATTGTGGGAGTATGAAATCCGTGTTGACGATATGGATGGCAGCACCTCAGCTAGAGCGTCTCGAATTAGTGGGTTGCCCAGAGATCAATTTGTGTGCTCCAGGGGTTCCACACCGTAGCCTCAGATATCTTGGAATCAGCTACTGCGAGAAACTAGTGAGCACTGCAGCATTCATGAATTCACAATTTCAAGGGCTTATTCATCTTTGGATTGAAGGTGAATGTGAGAGTGTGAAGTGTCTCCCAAAGGAAGGTTGGTTGCCTGCCTCCCTTGAGTCTCTCACACTGAGTGACATTAAAAATGTGGAGACGTTGGAATGCAACGGACTTGCCCACCTCACCTCCCTCCATGAATTATCTATTTATGAATGTCCCAAGTTGGAGAATATGGAGGGTGAAAAGCTGCCTGCCTCTCTAATACAACTCATCATCTTTGGAAGCCCTTTGCTGGGCAAACGATGTCAGGAGAAGGATCCACAGCTTTGGCCCAAAATCTCCCACATCCCCGCCATTCAAGTTGATCACACATGGATTTGGTAA 3630 0.4165 MAEKLYGGAYLSPFVNTVLGNLSSILEDDSVLYGNYSALELLKRLRNCLCVVRSVLDDAEYKQFTDKEVKKWLVDLQDALYMADDLLDELSTKAAVAATPSDPGNSSSWSRLVDSYIEDTGDMEKIVRRLDSVVERKDSLCLEKSAKLDMSWRSPSTSLLEPSEICGRKEDKEAILKLLLDDDDAADGDLSVIPIVGMGGIGKTTLAQLLYHDDKVKDNFDFQGWVCVSEEFDVVKVTKTIIEAITSKSCNLTDLNLLQLDLKEKLSRQKFFIVLDDVWNEIYDDWNKLLKPFQKGVKGSKILITTRNKNVASLVQTVSPHELRSLSDEDCWLVFSKHARLSIVSVENPTLEKIGRDIVKKCDGLPLAAQALGGILRGNSDIRYWNHLLKSEIWELSNDRINVVPALRISYYFLPSYLKECFXYCSLYPKNYEFSKDELILLWMAENFLQPVGKKTMEEVGGECFDELIARSFLQPHRTREKNFVMHDLVHDLAMTCAGEFYFRAEDLRNAIEVDTKARHLSHNAKGNYPLSNLLGVCDRVKHTRTFIEINLNEWIPFNMENAACILLSQLKYMRALSLKNFPLVSVPDSIGELIHLRYLDLSXTXIVTLPESLGNLYNLQTLKLYWCRNLKMLPVCMKDLVNLRHLDIRETRVHVMPKGMSQLKNLQFLSNYVVGKREENKXTELGALXDLQQSISIXXLENVVNSSEAWMARMFDKDGICSLKLSWLPDEDENIVDSQTERDILDKLQPHTNLKELEIRGYRGTTFSDWLGSSSYRNITYVWLDGCRNCCMLPSLGQLPSLKHLTILNFESVEIVGAEFYFYQNDESCLETPFPKLESLLFSSLPCWKEWRSMEFNAFPGLRELTIMECPMLRGDLPNQLPSLQSLQIMGCDELSCCVPRAPAITSLSISGKHLVGSVVEAITNTQLSCLTSLRISDCSSHIWFPVSAIPPSLQELRIRDCRKLEFEMDGQHHSLQELYIRSSCDSLASFSLLDSFPNLVRVDIKYCGNMESIVVSRSLSCLRYLWIKHCGSMKSVLTIWMAAPQLERLELVGCPEINLCAPGVPHRSLRYLGISYCEKLVSTAAFMNSQFQGLIHLWIEGECESVKCLPKEGWLPASLESLTLSDIKNVETLECNGLAHLTSLHELSIYECPKLENMEGEKLPASLIQLIIFGSPLLGKRCQEKDPQLWPKISHIPAIQVDHTWIW* 1210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3310 1209 Gene3D Ribonuclease Inhibitor 543 941 IPR032675 -
Amo12g3310 1209 Gene3D - 325 409 IPR042197 -
Amo12g3310 1209 Pfam NB-ARC domain 169 390 IPR002182 GO:0043531
Amo12g3310 1209 SUPERFAMILY L domain-like 476 982 - -
Amo12g3310 1209 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 425 IPR027417 -
Amo12g3310 1209 Gene3D - 154 319 IPR027417 -
Amo12g3310 1209 SUPERFAMILY L domain-like 905 1194 - -
Amo12g3310 1209 Pfam Rx N-terminal domain 14 95 IPR041118 -
Amo12g3310 1209 Gene3D - 15 127 - -
Amo12g3310 1209 Gene3D - 410 496 IPR036388 -
Amo12g3310 1209 PANTHER DISEASE RESISTANCE PROTEIN RP 68 947 IPR044974 GO:0006952
Amo12g3310 1209 Gene3D Ribonuclease Inhibitor 1066 1174 IPR032675 -
Amo12g3310 1209 Gene3D Ribonuclease Inhibitor 969 1065 IPR032675 -
Amo12g3310 1209 PRINTS Disease resistance protein signature 265 279 - -
Amo12g3310 1209 PRINTS Disease resistance protein signature 192 207 - -
Amo12g3310 1209 PRINTS Disease resistance protein signature 362 376 - -
Amo12g3310 1209 PRINTS Disease resistance protein signature 615 631 - -
Amo12g3310 1209 PANTHER - 68 947 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3310 Amo-Chr12 122134418 122139690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g3310 189 378 WRKY Transcription Factor Family AT5G45050 26.154 1.21e-09 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g3310 - - adu:107472405 1732.23