Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3284 ATGGCTGAAAAACTTTATGGTGGAGCTTACCTCTCTCCCTTTGTTGATGCTGTTTTGGACAGCCTGACTTCAATACTTGAAGAAGACGACTCTTTCCTCGAAAGGAACAACTTGCTTGGAAGGTTGCAGAATTGTCTGTATGATGTTAGACCTGTTCTTGATGATGCTGAGCTGAAGCAGTTCAGTGACAAGAAAGTCAAGAAGTGGCTTGTTGATCTTCAAGATGCTCTCTTTATGGCMGATGACTTGCTCGACGAACTCTCCACTAAAGCCGCTATTGCTGCCGCTCAAAGGGATCCAAGTAACTCTTCCTCCTGGTCTCGCCTTGTTGATTCATATATTGAAGATACTGGTGACATCGAATACATAGTTCGAAGACTAGAATCTGCTGTAGCACGCAAAAATTATCTTCGTTTGAAGGAGACCGCAAAGGTGGACATCTCATGGAGAATTCCATCCACATGTCTTGTTGAACCATCGGAGATATGTGGCAGGAAAGAAGACAAGGAGGCCATACTGAAYCTGTTGTTGGATGATGATGATGATGCTGATGGTGATTTATCTGTCATTCCCATTGTGGGCATGGGCGGAATAGGAAAGACTACTTTGGCCCAATTGCTTTACCATGATGACAAAGTGAAGGAGAATTTTGATTTTCGAGGTTGGGTTTGTGTGTCAGAAGAGTTTGATGTTGTCAAGGTCACCAAGACTGTAATCGAGGCAATAACTTCAAGTTCTTGTAACTTGACAGATTTGAATTTACTTCAGCTTCATTTGAAAGAAAAGTTGTCCAGGCAAAAGTTTTTTATTGTCTTGGACGATGTTTTGAATGAAAACTATGATGATTGGAATTCACTTCTAAAACCTTTTCAAAAAGGGGTTAAGGGAAGTAAAATTCTCATAACTACTAGAAATAAAAATGTGGCTTCTGTAGTGCAAACTGTTTCACCTCATGAACTAAGTTTATTGTCTGACGAAGATTGTTGGTTAGTGTTTTCAAAGCATGCCCGTCTTTCAACTGTTTCTGTGGAGAATCTAACCCTGGAAAAAATCGGCAGAGATATCGTAAAGAAGTGTGATGGATTGCCGTTGGCAGCTCAAGCCCTTGGTGGCATATTGCGTGGAAATTCTGATATCAGAGATTGGAATCATTTACTAAAGAGTGAAATCTGGGAACTCTCCAATGACAGAATAAATGTTGTTCCAGCGTTAAGGATAAGTTATTATTTTCTTCCTTCATATTTGAAGCAGTGCTTTGTTTATTGTTCCTTGTATCCCAAGAACTATGAATTTAGCAAGGATGAATTGATATTGTTATGGATGGCTGAGAATTTTTTGCAACCAGTAGGTAAAAAAACCATAGAAGAAGTTGGTGGTGAATATTTTGATGAATTAATTGCGAGATCATTTTTGCAACCTCACAAAACCCGTGAAAAGAATTTTGTGATCCATGATCTTGTTCATGATTTAGCAATGACATGTGCTGGAGAATTCTATTTCAGAGCTGAAGATCTTCGGAATGCAGTTGAGGTTGATGCTAAAGCTCGTCATTTGTCACATAACGCCAAAGGCAATTATCCATTGTCAAATCTTTTGGGAGTTTGTGATAGACTAAAACATACGAGGACATTTATTGAAATCAATTTGAACAAGTGGATTCCATTCAATATGGAAAATGCACCTTGTATCATGTTGTCACAGTTGAAGTACCTGAGAGCTTTGTCGTTCGATAGATTTCCTCTTGAGTCAGTGCCTGATTCAATAGGTGAGTTGATTCATCTGCGTTACTTGGATCTCTCTCGGACGGACATTGTGACATTGCCGGAGTCATTAAGTAACCTATACAATTTACAGACCTTGAAGTTGTATTGGTGTACACATCTGGAAATGCTACCTGTTGGCATGAAAGACCTTGTAAATTTGCGCCATCTTGATATTAGAGTGACTCAGTTACGTGAGATGCCAAAAGGCATGAGCAAATTAAAAAATTTGCAGTTTTTAAGTAGTTATGTTGTTGGAAAGCATGAAGAAAACAAGATGAAAGAATTGGGAGCACTCGTAGATATACAGCAATCTATTTCCATTGACAAGTTGGAGAATGTGGTGAACAGCAATGAAGCTTCGATGGCAAGAATGTTTGATAAGGATGGCATTGATTCTATGATGTTAAGTTGGTCGTGGAACAAAGACGAGAATACAGTTGATTCCGAAATGGAAAGAGATATACTTGACAAGTTACGACCTCACACTAATTTGAAAGAGTTACAGATCAGGGGTTACAGGGGTACAAGATTTCCAGATTGGGTGGGACATTCTTCCTACCACAACATCACCAAAATAAAACTGTATGCTTGCAGGAGTTGCTGTATGCTTCCTTCACTTGGACAATTGCCCTCGTTGAAGATCCTATTAATTTCAGGTTATAGAAGTCTGGGAAGTGTGGGTGCTGAGTTATACTTTAACCAGAATGGTGAATCTTGTTTGGAGACACCACCATTCCCAGTGCTTGAAACTCTTAATTTTGAGTCATTGGATGGCTGGAAGGAGTGGCGTTCATTGGAGTTCAATGCGTTTCCGAGACTTAGGGAGCTTACTATACGCCGGTGTCCGATGTTGAGAGGAGATTTGCCCAATCATCTACCATCTTTGCAATCACTTCAGATTTGGAATTGTGAGCAGCTGAGTTGTTGTGTTCCAAGATCTCCTGAAATGACCTCTTTATGTATAGAAGGCGGGAATGAAGTGAGAATTGGGGAGCTACCTCCTTTACTGCGTGAGCTATCAATTGCAGGAAACTATCACGTGGAGTCGGCGGTACAGGCCATAATGCACATGCAACTGAGTTGCCTGACGTCTTTATCCATTGCAGATTGTTCCTCCCACATATCGTTTCCAGTGAGTGCTATTCCCGCATCGCTGCAACAGTTGACGATACTGCGTTGCAGAAAACTAAAATTCCAAATGGATGGCCATCATCACTCGCTGCAGAAACTATCAATAGAGAAAAGCTGTGATTCAGTTACATCCTTCTCGTTGTTGGATTCCTTTCCAAATCTCGTGCAAGTTGATATCAAAGGCTGTGGAAACATGGAGTGTATTGTGGTGTCACGTTCTCTTCCATGTCTCCGTTCTTTACGTATCATCGGGTGTAGGAATTTGAAATCTGTGTCAACGCTATGGATGGCAGCACCTCAGCTAGAGCTTCTCACATTACTGGGTTGCCCAGAGATTGATTTGTCTCCTACAGGGGATGGGGATCCACACCGTAGCCTCAGATCTCTTGAAATCCGCAACATCGAGAGAGTGGTGAGCTCTGCAGCATTCATGAATTCGCAATTTCATGGGCTTATTCATGGTGAATACGGCGAGAGCGTGAAGTCCCTCCCAAAGGAAGGTTGGTTGCCTGCCTCCCTTGAGTCTCTCACACTGACAAGCATTGAGAGTCTGGAGACGTTGGAATGCAAGGGACTTGCCCACCTCACCTCCCTCCAACGTTTAACTATCAGTAATTGTTGGAATCTGGAGTATATCCAGGGAGATAAGCTGCCTGCCTCTCTAACACAACTCTGCATCAGTGTAAGCCCTTTGCTGGCCAAACGATGTGAGAAGAAGGATCCACAGCTTTGGCCCAAAATCTCCCACATCCCCGCCATTCAAGTTGATCACAAATGGATTTGA 3678 0.4173 MAEKLYGGAYLSPFVDAVLDSLTSILEEDDSFLERNNLLGRLQNCLYDVRPVLDDAELKQFSDKKVKKWLVDLQDALFMADDLLDELSTKAAIAAAQRDPSNSSSWSRLVDSYIEDTGDIEYIVRRLESAVARKNYLRLKETAKVDISWRIPSTCLVEPSEICGRKEDKEAILNLLLDDDDDADGDLSVIPIVGMGGIGKTTLAQLLYHDDKVKENFDFRGWVCVSEEFDVVKVTKTVIEAITSSSCNLTDLNLLQLHLKEKLSRQKFFIVLDDVLNENYDDWNSLLKPFQKGVKGSKILITTRNKNVASVVQTVSPHELSLLSDEDCWLVFSKHARLSTVSVENLTLEKIGRDIVKKCDGLPLAAQALGGILRGNSDIRDWNHLLKSEIWELSNDRINVVPALRISYYFLPSYLKQCFVYCSLYPKNYEFSKDELILLWMAENFLQPVGKKTIEEVGGEYFDELIARSFLQPHKTREKNFVIHDLVHDLAMTCAGEFYFRAEDLRNAVEVDAKARHLSHNAKGNYPLSNLLGVCDRLKHTRTFIEINLNKWIPFNMENAPCIMLSQLKYLRALSFDRFPLESVPDSIGELIHLRYLDLSRTDIVTLPESLSNLYNLQTLKLYWCTHLEMLPVGMKDLVNLRHLDIRVTQLREMPKGMSKLKNLQFLSSYVVGKHEENKMKELGALVDIQQSISIDKLENVVNSNEASMARMFDKDGIDSMMLSWSWNKDENTVDSEMERDILDKLRPHTNLKELQIRGYRGTRFPDWVGHSSYHNITKIKLYACRSCCMLPSLGQLPSLKILLISGYRSLGSVGAELYFNQNGESCLETPPFPVLETLNFESLDGWKEWRSLEFNAFPRLRELTIRRCPMLRGDLPNHLPSLQSLQIWNCEQLSCCVPRSPEMTSLCIEGGNEVRIGELPPLLRELSIAGNYHVESAVQAIMHMQLSCLTSLSIADCSSHISFPVSAIPASLQQLTILRCRKLKFQMDGHHHSLQKLSIEKSCDSVTSFSLLDSFPNLVQVDIKGCGNMECIVVSRSLPCLRSLRIIGCRNLKSVSTLWMAAPQLELLTLLGCPEIDLSPTGDGDPHRSLRSLEIRNIERVVSSAAFMNSQFHGLIHGEYGESVKSLPKEGWLPASLESLTLTSIESLETLECKGLAHLTSLQRLTISNCWNLEYIQGDKLPASLTQLCISVSPLLAKRCEKKDPQLWPKISHIPAIQVDHKWI* 1226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3284 1225 Gene3D - 15 120 - -
Amo12g3284 1225 PANTHER DISEASE RESISTANCE PROTEIN RP 35 962 IPR044974 GO:0006952
Amo12g3284 1225 SUPERFAMILY L domain-like 817 1098 - -
Amo12g3284 1225 SMART LRR_typ_2 591 614 IPR003591 -
Amo12g3284 1225 SMART LRR_typ_2 638 661 IPR003591 -
Amo12g3284 1225 PRINTS Disease resistance protein signature 795 811 - -
Amo12g3284 1225 PRINTS Disease resistance protein signature 189 204 - -
Amo12g3284 1225 PRINTS Disease resistance protein signature 262 276 - -
Amo12g3284 1225 PRINTS Disease resistance protein signature 359 373 - -
Amo12g3284 1225 Gene3D - 407 493 IPR036388 -
Amo12g3284 1225 Gene3D - 322 406 IPR042197 -
Amo12g3284 1225 Pfam NB-ARC domain 166 387 IPR002182 GO:0043531
Amo12g3284 1225 Gene3D Ribonuclease Inhibitor 545 705 IPR032675 -
Amo12g3284 1225 PANTHER OS05G0414200 PROTEIN 35 962 - -
Amo12g3284 1225 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 422 IPR027417 -
Amo12g3284 1225 Pfam Rx N-terminal domain 14 94 IPR041118 -
Amo12g3284 1225 Gene3D Ribonuclease Inhibitor 721 907 IPR032675 -
Amo12g3284 1225 Gene3D Ribonuclease Inhibitor 908 1218 IPR032675 -
Amo12g3284 1225 SUPERFAMILY L domain-like 483 902 - -
Amo12g3284 1225 Gene3D - 149 316 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3284 Amo-Chr12 121822270 121826884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g3284 186 375 WRKY Transcription Factor Family AT5G45050 26.154 6.10e-09 58.9