Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3277 ATGGCTGCAAAACTTTATGGTGGAGCTTACCTCTCTCCCTTTGTTGATGCTGTTTTGGACAACCTTACTTCAATACCTGAAGATGACTCAGTCCCCAATGGAAACTACTCTTCCCTTGAGTTGCTTGGAAGGTTGCAAAATTGTCTGTATGATGTTGGACCAGTTCTTGATGATGCTGAGCTGAAGCAGTTCACTGACAAGAGAGTCAAGAAGTGGCTTGTTGATCTCCAAGATGCTCTCTTTATGGCTGATGACTTACTTGACGAACTCTCTACTAAAGCCGCTATTGCTGCCACTCAAAGGGATCCAGGTAACTCTTCCTCCTGGTCTTGCCTTGTTGATTCATATATAGAAGATACTGGTGACATGGAAAAAATAGTTGGCACACTAGAGTCTGTTGTAAGACGCAAAAATTATCTTCGTCTGAAGGAGAGTGCCAAGGTGGACATGTCATGGAGAATTCCATCCACATGTCTTGTTGAACCATCGGAGATATGTGGCAGGAAAGAAGACAAGGAGACCATACTGAAACTGTTGTTGGATGATGATGATGCTGCTGATGGTGATTTATCTGTGATTCCCATTGTGGGCATGGGCGGAATAGGAAAGACTACTTTGGCCCAATTGCTTTACCACGATGACAAAGTGAAGGAGAATTTTGATTTTCGAGGTTGGGTTTGTGTGTCAGAAGAGTTTGATGTTGTCAAGGTCACCAAGACTGTAATCGAGGCAATAACTTCAAGTTCTTGTAACTTGACAGATTTGAATTTACTTCAGCTTGATTTAAAGGAAAAGTTGTCGAGGCAAAAGTTCTTCATTGTCTTGGACGACGTATGGAATGAAAATTATAGTGATTGGGATAAGCTTCTAAAACCTTTTCAAAAAGGGGTTAAGGGAAGTAAAATTCTCATAACTACTAGAAACAAAAATGTGGCTTCTTTAGTGCAGACTGTTTCACCTCATGAACTAAGATCATTGTCCGATGAAGATTGTTGGTTGGTGTTTACAAAGCATGCACGTCTGTCAAATGTTTCTGTCGAGAATCCAACCCTGGAAAAAATCGGCAGAGATATCGTAAAGAAGTGTGATGGATTGCCCTTGGCAGCTCAAGCCCTTGGAGGCATATTGCGTGGAAATTCTGATATCAGATATTGGAATCATTTACTGAAAAGTGAAATCTGGGAACTCTCCAATGACAGAATAAATGTTGTTCCAGCGTTAAGGATAAGTTATTATTTTCTTCCTTCATATTTGAAGCAGTGCTTTGTTTATTGTTCCTTGTATCCCAAGGACTATGAATTTAGCAAGGATGAATTGATGCTGTTATGGATGGCAGAGAATTTTTTACAACCAGTAGGAAAAAAGGCCATGGAAGAAGTTGGTGGTGAATATTTTGATGAATTAATTGCGAGATCATTTTTGCAACCTCATAGTACCGAGGAAAATAAATTTGTGATGCATGATCTTGTTCATGATTTAGCAATCACATGTGCTGGAGAATTCTATTTCAGAGCTGAAGAGCTTCGGAATGCAGTTGAGGTTGATATTAAAGCTCGTCATTTGTCACATAACGCCGAAGGCAATTATCCAATGTCAAATCTTTTGGGAGTTTGTGATAGACAAAAACATACAAGGACATTTCTTGAAATCAATTTGAACAAGCGGAGTCCATTTAACGTGGAAAATGCACCTTGTATCATATTGTCACAGTTGAAGTACCTGAGAGCTTTGTCGTTCAAAAGCTTTCCTCTTGAGTTAGTGCCTGATTCAATAGGTGAGTTGATTCATCTGCGTTACTTGGATCTCTCTTGGACGGACATCGTGGCTTTGCCAGAGTCATTGGGTAACCTATACAATTTGCAGACCTTGAAGTTGTATTTCTGTAGAAAGCTGAAACTGCTACCTGTTGGCATGAAAGACCTTGTAAATTTGCGCCATCTTGATATTAGAGAGACTAGGTTATGTGAGATGCCGAAAGGCATGAGCAAATTAAAAAGTTTGCAGTTTTTAAGTGATTATGTTGTTGGAAAGCATGAAGAAAACAAAATTAAAGAATTGGGAGCACTTGTAGATCTACACCAATTTATTTCCATTGACGAGTTGGAGAATGTGGTGAACAGCAATGAAGCTTCGATGGCAAGAATGTTTGATAAGGATGGCATTGATTCTATGATGTTAAGTTGGTCGTGGAATAAAGACGAGAATAAAGTTGATTCTGAAATGGAAAGAGATATACTTGACAAGTTACGACCTCACGTTAATTTGAAAGAGTTAAAGATCAAGGGTTACAGCGGTACAAGATTTCCAGACTGGGTGGGACATTCTTCCTACCACAACATCACCAAAATAACACTGACTGGTTGCAACAGTTGCTTTATGCTTCCTTCACTTGGACAGTTGCCCTCTTTGAAGCACCTTCAAATTTCAGATTTTGGAAGTCTGGCAAGTGTGGGTGCTGAGTTTTACTTTAACCAGAACGGTGAATCTTGTTTGAGGACACCACCATTCCCAATGCTTGAAAGTCTTTCGTTTTATTCAATGCGTTGCTGGAAGGAGTGGCGTTCATTGGAGTTCAATGGGTTTCCTCAACTTAGGCATCTCACCATAAGGGAGTGTCCGATGTTGAGAGGAGATTTGCCGAATCATCTACCATCTTTGCAATCACTTGAGATTAGGAATTGCAAGCAGCTGAGTTGTTGTGTTCCAAGATCTCCTGCAATGACGTCTTTAAGTATAGAAGGCGGGAATGAAGTGAGAATTGGGGAGCTACCTCCTTTACTACGTGAGCTATCAATTGAAGGAAACCATCACGTGGAGTCGGCGGTAGAGGCCATAATGCACATGCAATTGACTTGCCTGACATCTTTATACATTGCAGACTGTTCCACCCACATATGGTTTCCAGTGAGTGCTATTCCCCCATCACTTCAAAAGTTGACAATATGGTATTGCAGAGAATTAGAATTCCAAATGGACGGGCAACATCACTCGCTGCAGAAACTATCAATAGAGAACAGCTGTGATTCAGTTACATCCTTCTCGTTGTTGAATTCCTTTCCGAATCTCGTGCGTGTTAGTATCATGAACTGTGAAAATATGGAGTCTATTGTGGTTTCACGCTCTCTTCCATGTCTCCGTTCTTTACGTATCTGCGATTGTGAGAGTTTGAAATCTGTGTCAACGCTATGGATGGCAGCACCTCAGCTACAGCATGTTGAAATACTGGCTTGCCCAGAGGTTGATTTGTCTCCTACAGGGGATGAAGATCCACACTGTAGCCTGAGATCTCTTGAAATCAGCTACAGCGAGAAACTGGTGAGCTCTGCAGCATTCATGAATTCGCAATTTCATGGGCTTACTCATCTTACCATTCATGGTGAATACGGCGACAGTGTGAAGTCCCTCCCAAAGGAAGGTTGGTTGCCTTCCTCCCTTGAGTCTCTCACACTGGAAGGCATTGAAAGTGTGGAGACGTTGGAATGCAAGGGACTTGCCCACCTCACCTCCCTCCAGAAACTAAGTATTTGGTATTGTGACAAGTTGGAGAATATGGTGGGAGAAAAGCTGCCTGCCTCTCTAATACAACTCAACATCTGGGGAAGCCCTTTGCTGGGCAAACGATGTCAGATGAAGGATCCACAACTTTGGCCCAAAATCTCCCACATCCCGGCCATTCAAGTTGATGACACTTGGATTTGA 3699 0.4161 MAAKLYGGAYLSPFVDAVLDNLTSIPEDDSVPNGNYSSLELLGRLQNCLYDVGPVLDDAELKQFTDKRVKKWLVDLQDALFMADDLLDELSTKAAIAATQRDPGNSSSWSCLVDSYIEDTGDMEKIVGTLESVVRRKNYLRLKESAKVDMSWRIPSTCLVEPSEICGRKEDKETILKLLLDDDDAADGDLSVIPIVGMGGIGKTTLAQLLYHDDKVKENFDFRGWVCVSEEFDVVKVTKTVIEAITSSSCNLTDLNLLQLDLKEKLSRQKFFIVLDDVWNENYSDWDKLLKPFQKGVKGSKILITTRNKNVASLVQTVSPHELRSLSDEDCWLVFTKHARLSNVSVENPTLEKIGRDIVKKCDGLPLAAQALGGILRGNSDIRYWNHLLKSEIWELSNDRINVVPALRISYYFLPSYLKQCFVYCSLYPKDYEFSKDELMLLWMAENFLQPVGKKAMEEVGGEYFDELIARSFLQPHSTEENKFVMHDLVHDLAITCAGEFYFRAEELRNAVEVDIKARHLSHNAEGNYPMSNLLGVCDRQKHTRTFLEINLNKRSPFNVENAPCIILSQLKYLRALSFKSFPLELVPDSIGELIHLRYLDLSWTDIVALPESLGNLYNLQTLKLYFCRKLKLLPVGMKDLVNLRHLDIRETRLCEMPKGMSKLKSLQFLSDYVVGKHEENKIKELGALVDLHQFISIDELENVVNSNEASMARMFDKDGIDSMMLSWSWNKDENKVDSEMERDILDKLRPHVNLKELKIKGYSGTRFPDWVGHSSYHNITKITLTGCNSCFMLPSLGQLPSLKHLQISDFGSLASVGAEFYFNQNGESCLRTPPFPMLESLSFYSMRCWKEWRSLEFNGFPQLRHLTIRECPMLRGDLPNHLPSLQSLEIRNCKQLSCCVPRSPAMTSLSIEGGNEVRIGELPPLLRELSIEGNHHVESAVEAIMHMQLTCLTSLYIADCSTHIWFPVSAIPPSLQKLTIWYCRELEFQMDGQHHSLQKLSIENSCDSVTSFSLLNSFPNLVRVSIMNCENMESIVVSRSLPCLRSLRICDCESLKSVSTLWMAAPQLQHVEILACPEVDLSPTGDEDPHCSLRSLEISYSEKLVSSAAFMNSQFHGLTHLTIHGEYGDSVKSLPKEGWLPSSLESLTLEGIESVETLECKGLAHLTSLQKLSIWYCDKLENMVGEKLPASLIQLNIWGSPLLGKRCQMKDPQLWPKISHIPAIQVDDTWI* 1233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3277 1232 Gene3D Ribonuclease Inhibitor 827 1083 IPR032675 -
Amo12g3277 1232 PANTHER - 77 993 - -
Amo12g3277 1232 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 425 IPR027417 -
Amo12g3277 1232 SUPERFAMILY L domain-like 485 910 - -
Amo12g3277 1232 Gene3D Ribonuclease Inhibitor 1090 1211 IPR032675 -
Amo12g3277 1232 Pfam NB-ARC domain 170 390 IPR002182 GO:0043531
Amo12g3277 1232 PRINTS Disease resistance protein signature 192 207 - -
Amo12g3277 1232 PRINTS Disease resistance protein signature 265 279 - -
Amo12g3277 1232 PRINTS Disease resistance protein signature 362 376 - -
Amo12g3277 1232 PRINTS Disease resistance protein signature 881 897 - -
Amo12g3277 1232 Gene3D - 37 126 - -
Amo12g3277 1232 Gene3D - 151 319 IPR027417 -
Amo12g3277 1232 SUPERFAMILY L domain-like 907 1219 - -
Amo12g3277 1232 Gene3D - 410 496 IPR036388 -
Amo12g3277 1232 Gene3D - 325 409 IPR042197 -
Amo12g3277 1232 Gene3D Ribonuclease Inhibitor 547 826 IPR032675 -
Amo12g3277 1232 PANTHER DISEASE RESISTANCE PROTEIN RP 77 993 IPR044974 GO:0006952
Amo12g3277 1232 Pfam Rx N-terminal domain 17 96 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3277 Amo-Chr12 121729501 121734091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g3277 189 655 WRKY Transcription Factor Family AT5G45050 21.429 3.29e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g3277 - - ahf:112728733 1900.18