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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Amo12g3276
ATGATACAAAACTACAAAATTCTCAAAAATGAAATGAAATTCATTCTTGGTAACTTAATTATTCATGGATACATAAGTTTCATTTCTTGTTCTTTCCTTTCTAGATATGTGCAGAATATCCTTACATGGATCAATTTTATGGACTCTTCTCAGCTTATGCACCTCAAATTTTGGGGGCATATAATGCTGCCACTAAACTTGACATCAGATGATGGACCAACTTACGTGAATGCTAAGCAATACCATAGGCAGTCACGTGCTAAAGCTGTTCTTGCCAATAAACTCATAAAACGTCGCAAGCCATATATGCATGAATCGTGCCATCTCCACGCGATGCGACGGCCAAGAGAATGTGGTGGCAGGTTCTTGAACACAAGAAACTCTGCCACCAACAATGGAAATGGCAAGATTGGAAGTGAAGCAAACAAAAAAGCACTTGGCCAACAACTACATTCTAGTGGTTCTCAGAGTTCTGAAGTCCTACAATCCTCCGCCGGATCCTTGAATTCGTTGAAGGAAACAAATGGAAGCAGTTCAAACATTTCATCAGAGGTGACAAGCATGTACTCATCAAGAGGAGGAATTGATAGATTTGCCATCAATCACATTGGAACTCCTATGCAGTCCCTTGCAGATATGATGGACACTGGACATGGACATGGCATGATCATGCCCCGAAATGGGTTTCGGCTGCGGCCGGAAACTGCTGCAACCTTAATGTTTGATCTGGCAAGGATATTAAGCGAGTTTTGGTGTAGCATTGCACCAAAATCCTCGTATCCTTGTCAGGCCAGATGGAAAATGCTATTTTCCTTTCTGGTGCTTAGGCAACTCATCCTTGGCTCAATTATATTCTCTATCAATCTTAAAAGTATGTTACTTTAA
885
0.409
MIQNYKILKNEMKFILGNLIIHGYISFISCSFLSRYVQNILTWINFMDSSQLMHLKFWGHIMLPLNLTSDDGPTYVNAKQYHRQSRAKAVLANKLIKRRKPYMHESCHLHAMRRPRECGGRFLNTRNSATNNGNGKIGSEANKKALGQQLHSSGSQSSEVLQSSAGSLNSLKETNGSSSNISSEVTSMYSSRGGIDRFAINHIGTPMQSLADMMDTGHGHGMIMPRNGFRLRPETAATLMFDLARILSEFWCSIAPKSSYPCQARWKMLFSFLVLRQLILGSIIFSINLKSMLL*
295
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Amo12g3276
294
SMART
cbf3
69
125
IPR001289
GO:0003700|GO:0006355
Amo12g3276
294
PANTHER
TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED
58
240
IPR001289
GO:0003700|GO:0006355
Amo12g3276
294
MobiDBLite
consensus disorder prediction
120
183
-
-
Amo12g3276
294
Gene3D
-
70
127
-
-
Amo12g3276
294
ProSiteProfiles
NF-YA/HAP2 family profile.
70
125
IPR001289
GO:0003700|GO:0006355
Amo12g3276
294
Pfam
CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B
73
122
IPR001289
GO:0003700|GO:0006355
Amo12g3276
294
MobiDBLite
consensus disorder prediction
145
183
-
-
Amo12g3276
294
PANTHER
CCAAT-BINDING TRANSCRIPTION FACTOR
58
240
-
-
Amo12g3276
294
MobiDBLite
consensus disorder prediction
123
138
-
-
Amo12g3276
294
ProSiteProfiles
Prokaryotic membrane lipoprotein lipid attachment site profile.
1
30
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Amo12g3276
Amo-Chr12
121726525
121729076
Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Amo12g3276
59
188
CCAAT-HAP2 Transcription Factor Family
AT5G06510
48.175
3.70e-26
100
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
NF-YA
Amo12g3276
CBFB_NFYA
1.6e-16
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Amo12g3276
K08064
-
gmx:100527677
200.29
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