Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3273 ATGGCTGCAAAACTTGATGGTGGAGCTTATCTCACTTCTTTTGTTGATGCTATTTTAGACAAGTTGTCTTCAATACTTGAAGATGACTCTGTCCTCGACTCTGTCCTGGAATTGCTTGAAAGGTTGCAGAATAGTCTTTATGATGCTGGACCTGTTCTTGATGATGCTGAGCAGAAGCAGTTCACTGACAAGAGAGTCAAGAAGTGGCTTGTTGATCTCCAAGATGCTCTCTATTTTGCTGATGACTTGCTCGATGAACTCTCCACTAAGGCCGCCATCGCGGCCACTCAAGGTGATCCAGGTAACTCTTCTTCCTGGTCTCGTCATGTTGATTCATATATTGATGATAGTGGTGTCAACGTCATTGAAAAAATAGTTGGCAAACTAGAGTCTCTTGTAAAAAGAAAAGCTAAACTGGGTCTAGAAAAGAGTGCCAAGTTGGACACATCATGGAGAATTCCATCCACATCTCTCGTTGTAAGTTCTGACATATTCGGTCGGGACAAAGAGAAGAGAGAGATAATCAAATTGTTGCTAGATGATTCTGAATCACCTCTTACTCTGATCCCAATTTGGGGTATGGGTGGAATAGGAAAAACTGCTCTGGCTCAACTGGTTTACAGTGATGCTGAAGTAGTGGGAAAATTTGACACTAGAGCATGGGTGTGTGTTGCTGAAAATTTTAATCCTATTAGCCTTACAAGAACTATACTAGAGAAAATAACTTGTAGTTCTTATAAGAGGGATGATTTTGATTCACTTCAAACTCATCTGAAACAAAAGTTGATAGGAAAAACATTCTTAGTTGTTTTAGATGATGTCTGGCATGATCAACAAGACATTTGGGAGGATCTTCTAAAACCTTTTCGCTACGGTAATCATGGAAGTAAAATTCTTTTGACAACCCGTAGTGAAAAGGTTGCTTCTGTGGTTGCAACTACCGATCTACATTACCAACTGAGTTTGTTGTCTAATGAAGATTGCTGGTTAGTATTTTCAAAACACGCACGTCTTTCTGCTGACTCTATGAAGAATCCAACTCTGCAAAAAGTCGGCAAAGATATTGTAAAGAAGTGTGATGGATTGCCCTTGGCAGCTCAAGCACTCGGAGGCTTATTGCGTGGAAATTATGAAGTCAAGTCTTGGAATCATATATTGAAGAACGAGATCTGGAAATCCTCCAATGACAAGATAAAAATTGTTCCAGCCTTGAGAGTTAGTTATTATTATCTTCCTTCTTGTCTAAAAAAGTGTTTTGTTTATTGTTCCATATATCCCAAGAGTTATGAATTTGATAAAGATGAATTGATCTTGTTATGGATGGCGGAGAATCTCTTACAACCAATAGGAGAAAAGAGTCTAGAAGAAGTTGGTGACGAATATTTTGATGAATTATTTGTGAGGTCATTTTTCCAACCTCATAGTACTAATGAAAAGACATTTGTGATGCATGATCTTGTGCATGATTTGGCAATGATCTATGCTGGAGAATTCTGTTTTAGAGCAGAAGAGCATGAAAATGCTGTTGAGATTGATATTAAAGCTCGTCATTTATCACATAATGCTAAAGGCAATTATCCAATCTCAAAACTTGTAGGAGTTTGTGATAGAGTAGAACATACAAGAACATTTCTTGAAATCAATTTGTCACCAAATATCCCATTTGACATGGAAAACACACCTTGTATCTTGTTGTCAAAATTGAAGCGCCTTAGAGCTTTGTCGTTCAAATGCTTTCCTCTTGAGTCAGTGCCTGATTCAATAGGTGAGTTGATTCATTTGCGTTACTTGGATCTCTCTGGAACCTACATTGTGACATTGCCCGAGTCTTTGGGTAATCTTTACAATTTGCAGACCTTGAAGCTGATTGGATGTGAAAAATTGAAAATGCTTCCGGATGGCATGCAAAATCTTGTAAATTTAAGGCATCTTGATATTAGAGCAACTTGTTTGCGCAAGATGCCGAAAGGCATGAGCAAATTGAAAAGTTTGCAGTTTCTAAGCGACTTTGTCATTGGGAAGCATGAAGAGAACAAGATCAAAGAACTGGGAGCACTTGCAAATCTGCGCGAATCAATTTCCATTGACAAATTGGAGAATGTGGTCGACAGCAGTGAAGCTTGGGAGGCAAGAATGTTCGATAAGGATGGCATTGACTCTTTGAAGTTGAGTTGGTGGTCACATAAAAGTATGGAAGAAGTTTTTGCTTTTGCTGTCAAAAAGAAGGATGCAGCTGATTCCCAAATTGAAAGAGATATACTTGACAAGTTACAACCTCACAGTAATTTGAAAGAAGTAGAGATCAGTGGCTACAGAGGCACAACATTTCCAGATTGGTTGGAAAATTCTTCCTACCACAACATCACCACACTAACCCTGCAACATTGCAATAAATGTTCTGTGCTTCCTTCATTTGGACAATTGCCCTCTTTAAAGCACCTTACAATTTCAGATTTTAAAAGTCTGAAAACTGTGGGTGCTGAGTTTTACAAGGGTGGATCTTGTTTGGAGACACCCTTTCCAGTGCTTGAAACTCTTACATTTTGCTCAATTAGTGACTGGGTGAAGTGGGATTCAATGGAGTTCAATGCATTCCCTCGACTTGCGGAGCTTACCTTAAGTGACTGTCCCATGTTGACAGGAGATTTGCCCTATCATCTACCATCTTTGCAATCACTTACTATTGACAATTCCAAGGATCTTCGCTGTTGTCTTCCAATAGCTCCTGCAATGGCCTCTTTAAACATAGTTGGTGGCGGAGAAGTGAGTATTAGCGAGCTACCTCCTTTACTGCGTAAACTATCAATTCATGGAATTGATCAAGTGGAGCCAGTGGTTAAGGCCTTTCGGAATATGCAACTGACTTGCCTCACGTCTTTATGCATCTCAGATTGCTCCTTCCACATATCATTTCCAGTGAGTAGTATTCCTGCATCACTACAAGAGTTGACAATATCGGGTTGCGCAAAATTAGAACTCGAAATGGATGGGCATCACAAGTCCCTGCAGTCACTGAGTATAATTTACTACTATGATTCAGCTACATCCTTCTCTTGGGATGCCTTTCCGAATCTCGTGCGTCTCAACATCAGGAAGTGTAAAGAGATGGAGTCTATTGTGGTGTCACGGTCTCTTTCATGTCTCCGTTCTTTACATATATCCAGTTGTCAGAGTTTGAAGTCAGTGTCGACGCTGTGGATGGCAGCACCTCAGCTAGAGGATCTCAAAATAGTGGATTGCCCAGAGATCGAATTGTGTCCTACAGGGGATGGGCATCCACACCATAGCCTCAGATCTCTTACCATCAACTACTCCAAACTAATCAGTTGTGCAGCATTCATGAATTTGCAATTTTATGGGCTTACTCATCTTCGCATTTTGGGTGAATATAAGGAGAGTGTGAAGTGCCTCCCAAAGGAAGGCTGGTTGCCTGCCTCACTTGAGTCTCTCAGACTTTTTAACATTAAAAGTGTGGAGACGTTGGAATGCAAGGGACTTGCCCACCTCAACTGCCTCCAACAATTAAGTATATATCATTGCTCCAAGTTGAAGAATATTGAGGGAGAAAAGCTGCCTGCCTCTCTAAAACAACTCATCATCAAAGGGACTCCTTTGCTGGGTAAACGGTGCGAGAAGAAGGATCCTGAGGTTTGGCCTAAAATCTCCCATATCCACGGCATTCAAGTTGATAACAGATGGATTTTGTAA 3708 0.404 MAAKLDGGAYLTSFVDAILDKLSSILEDDSVLDSVLELLERLQNSLYDAGPVLDDAEQKQFTDKRVKKWLVDLQDALYFADDLLDELSTKAAIAATQGDPGNSSSWSRHVDSYIDDSGVNVIEKIVGKLESLVKRKAKLGLEKSAKLDTSWRIPSTSLVVSSDIFGRDKEKREIIKLLLDDSESPLTLIPIWGMGGIGKTALAQLVYSDAEVVGKFDTRAWVCVAENFNPISLTRTILEKITCSSYKRDDFDSLQTHLKQKLIGKTFLVVLDDVWHDQQDIWEDLLKPFRYGNHGSKILLTTRSEKVASVVATTDLHYQLSLLSNEDCWLVFSKHARLSADSMKNPTLQKVGKDIVKKCDGLPLAAQALGGLLRGNYEVKSWNHILKNEIWKSSNDKIKIVPALRVSYYYLPSCLKKCFVYCSIYPKSYEFDKDELILLWMAENLLQPIGEKSLEEVGDEYFDELFVRSFFQPHSTNEKTFVMHDLVHDLAMIYAGEFCFRAEEHENAVEIDIKARHLSHNAKGNYPISKLVGVCDRVEHTRTFLEINLSPNIPFDMENTPCILLSKLKRLRALSFKCFPLESVPDSIGELIHLRYLDLSGTYIVTLPESLGNLYNLQTLKLIGCEKLKMLPDGMQNLVNLRHLDIRATCLRKMPKGMSKLKSLQFLSDFVIGKHEENKIKELGALANLRESISIDKLENVVDSSEAWEARMFDKDGIDSLKLSWWSHKSMEEVFAFAVKKKDAADSQIERDILDKLQPHSNLKEVEISGYRGTTFPDWLENSSYHNITTLTLQHCNKCSVLPSFGQLPSLKHLTISDFKSLKTVGAEFYKGGSCLETPFPVLETLTFCSISDWVKWDSMEFNAFPRLAELTLSDCPMLTGDLPYHLPSLQSLTIDNSKDLRCCLPIAPAMASLNIVGGGEVSISELPPLLRKLSIHGIDQVEPVVKAFRNMQLTCLTSLCISDCSFHISFPVSSIPASLQELTISGCAKLELEMDGHHKSLQSLSIIYYYDSATSFSWDAFPNLVRLNIRKCKEMESIVVSRSLSCLRSLHISSCQSLKSVSTLWMAAPQLEDLKIVDCPEIELCPTGDGHPHHSLRSLTINYSKLISCAAFMNLQFYGLTHLRILGEYKESVKCLPKEGWLPASLESLRLFNIKSVETLECKGLAHLNCLQQLSIYHCSKLKNIEGEKLPASLKQLIIKGTPLLGKRCEKKDPEVWPKISHIHGIQVDNRWIL* 1236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3273 1235 Gene3D - 322 406 IPR042197 -
Amo12g3273 1235 Pfam Rx N-terminal domain 14 93 IPR041118 -
Amo12g3273 1235 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 422 IPR027417 -
Amo12g3273 1235 Gene3D - 407 492 IPR036388 -
Amo12g3273 1235 PANTHER OS05G0414200 PROTEIN 35 992 - -
Amo12g3273 1235 PANTHER DISEASE RESISTANCE PROTEIN RP 35 992 IPR044974 GO:0006952
Amo12g3273 1235 SUPERFAMILY L domain-like 482 898 - -
Amo12g3273 1235 Gene3D Ribonuclease Inhibitor 1092 1213 IPR032675 -
Amo12g3273 1235 Gene3D Ribonuclease Inhibitor 992 1091 IPR032675 -
Amo12g3273 1235 Gene3D Ribonuclease Inhibitor 536 935 IPR032675 -
Amo12g3273 1235 Pfam NB-ARC domain 168 388 IPR002182 GO:0043531
Amo12g3273 1235 Gene3D - 149 316 IPR027417 -
Amo12g3273 1235 SUPERFAMILY L domain-like 923 1221 - -
Amo12g3273 1235 PRINTS Disease resistance protein signature 188 203 - -
Amo12g3273 1235 PRINTS Disease resistance protein signature 261 275 - -
Amo12g3273 1235 PRINTS Disease resistance protein signature 359 373 - -
Amo12g3273 1235 PRINTS Disease resistance protein signature 612 628 - -
Amo12g3273 1235 Gene3D - 15 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3273 Amo-Chr12 121686310 121690959 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g3273 173 375 WRKY Transcription Factor Family AT5G45050 29.439 7.43e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g3273 - - adu:107472405 1556.58