Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3266 ATGGAAAAAGTAGCTGGCAAACTAGAGTCCGTTGTAAGACGCAAACGTTATCTTGGTCTGGAGAAGAGTGCCAAGGTGGACATGTCATGGAGAATTCCATCCACATCTCTCGTTGAACCATCGGAGATATGTGGCAGGAAAGAAGACAAGGAGGCCATACTGAAACTGTTGTTGGATGATGATGATGCTGCTGATGGTGATTTATCTGTCATTCCCATTGTGGGCATGGGCGGAATAGGAAAGACTACCTTGGCCCAGATGGTTTACTACGATGATAAAGTGAAGGAGAATTTTGATTTTCGAGGTTTGGTTTGCGTGTCAGCAGAGTTTGATGTTGTCAAGGTCACCAAGACTATAATCGAGGCAATAACTTCGAATTCTTGTAACTTGACAGATTTGAATTTACTTCAGCTTGATTTAAAGGAAAAGTTGTCTAGGCAAAAGTTCTTTATTGTCCTGGACGATGTCTGGAATGAAAATTATGAGGATTGGACTAAGCTTCTAAAACCTTTTCAAAAAGGGGTTAAGGGAAGTAAAATTCTCATAACTACTAGAAGTAAAAAGGTAGCTTATATGGTGCAAACTGTTTTGCCTCATGAACTAACTCCATTGTCCAATGAAGATTGTTGGTTGGTGTTCTCAAAACATGCACGTCTTTCAACTGTTTCTGTGGAGAATCCAACCCTGGAAAGGATCGGCAGAGATATGGTAAAGAGATGTGATGGATTGCCCTTGGCAGCTCAAGCCCTTGGAGGCTTATTGCGTGGAAATTCTGATGTCAAGTATTGGAATCAGTTAATGAAGAGTGAGATCTGGGAACTATCTGATGTTGAAATAAATGTTGTTCCAGCATTAAGAATAAGCGATTATCCAATGTCAAAAATTTTGAAAATTTGTGATAGAATAAAGCATACAAGGACATTTCTTGAAATCAATTTAGAGTCACATATCCCATTTAATATGGAAAATGCACCTTGTATCTTGTTGTCACAGTTGAAGTACATGAGAGCTTTGTCGTTCAAATGCTTTCCTCTTGAATCATTGCCTGATTCGCTGATTCATTTGCGTTATTTGAATCTCTCTGAGACCTACATTGTGACGTTGCCTGAGTCCTTGGGTAATCTGTACAATTTGCAAATCTTGAAGCTAACTCTATGTTGCAATCTGAAAATGCTTCCGGTTAGCATGCAAGATCTTGTAAATTTGCGCTATCTTGATATTTGGGGGACTATGTTACATGAGATGCCGAAAGGTATGAGCAAATTGGAAAGTTTGCATTTTTTAAGCCACTATGTTGTTGGTAAGGATGAAGAGAACAAGATCAAAGAATTGGGAGCACTGACAAATCTAGAGCAATCAATTTCCATTACCAAATTGGAGAATGTGGTGAATAGTAGTGAAGCTTTGGAGGCAAGAATGTTTGATAAGGACGGCATTGATTCTTTGTGGTTGAGTTGGTCTTGGTATGAAGGTGAGAATATGGTTGATTTCGAAATTGAAAGAGATATACTGGACAAGTTACAACCTTCCATTGGTTTGAAAGAACTAGCAATCGACGGTTACAGGGGTACAACATTTCCAGATTGGTTGGGGCATTCTTCTTATCACAACATCACCGAAGTTACTCTGGATGGTTGTAGCAACTGTTGTAGGCTTCCTTCACTTGGACAATTGGCCTCTTTGAAGCACCTTACAATTTCAAAGTTTGTAAATCTGGGGATTGTGGGTGCTGAGTTTTACTTCTGCCAGAACGATGAATCTTGTTTGGAGACACCATTTCCAATGCTAGAAACACTTGAATTTTCGTCAATGCCTTGGTGGGAGGAGTGGCATTCATCGGAGTTCAGTGCATTTCCCCGACTTAGGGTGCTTACCATAAATTGGTGTCCGATGTTGAAAGGAGATTTGCCGAATCATCTACCATCTTTGCAATCACTTGAGATCCAGAATTGCGAGCTGCTCAATTATTGTGTTCCGAGAACTCCTGGGATGACCTCTTTAAGCATACAAGGCAGCAATGAAGTGAGAATTGGGGAGCTACCTCCTTTACTGGGTAATCTATCAATTGAAAGAAGTGATCATCTAGTGCAGTCCGTGGTAGAGGCTACTACCCTCACGCAACTAACTTGCTTGACGTCTTTACGCATCTCAGGTTGTTCCTCTCAAATATGGTTTCCAGTGAGTGCTATTCCCCCATCACTACAAAAGCTGACGATTGAGGATTGCAGAGAATTAGAATTCCAAATGGATGGCCAACACCACTCACTTCAGCAACTATTAATAGAAAAAAGCTGTTCTTCACTTACATCCTTCTCGTTGTTGGATTCTTTTCCAAACCTCGTGCGTGTTGAAATCAAGTACTGTGGAAAGATGGAATCTGTTGCGGTATCACGCTCTCTTCCACGTCTCCGTTCTTTAGAGATCGACGATTGTTGGAGCTTGAAATCCGTGTCGACGCTATGGATGGCAGCACCTCAGCTAGAACAACTCTCGTTACTGAAATGCCCAGAGATCGATTTGTCTCCCACAGGGGATCCACACCGTAGTCTGAGATCTCTTACCATCAGCTACTACCAGAAACAGGTCATCTCTGCAGCATTCATGAATTTGCAATTTCATGGGTTAACTCATCTTCGCATTGAAGGTGGATACCGGGAGAGTGAAAGTGTGAAGTGTTTCCCAAAGGAAGGTTGGTTGCCTGCCTCACTTGAGTCTCTCGGACTGGTTGGCATGAAAAGTGTGGAGACGTTGGAATGCAAGGGACTTGCCCACCTCACCTCCCTCCAACGATTAAGAATTGATGGATGTGCCAAGTTGGAGAATATCGAGGGAGAAAAGCTGCCCGCCTCTCTAATACGACTCACCATCGTTCGAAGCCCTTTGTTGAGTAAACGGTGTGAGATGAAGGACCCACAGCTTTGGCCCAAAATTTCCCACATCCCCGGCATTCAAGTTGATGATAGATGGATTTGGTAA 2976 0.421 MEKVAGKLESVVRRKRYLGLEKSAKVDMSWRIPSTSLVEPSEICGRKEDKEAILKLLLDDDDAADGDLSVIPIVGMGGIGKTTLAQMVYYDDKVKENFDFRGLVCVSAEFDVVKVTKTIIEAITSNSCNLTDLNLLQLDLKEKLSRQKFFIVLDDVWNENYEDWTKLLKPFQKGVKGSKILITTRSKKVAYMVQTVLPHELTPLSNEDCWLVFSKHARLSTVSVENPTLERIGRDMVKRCDGLPLAAQALGGLLRGNSDVKYWNQLMKSEIWELSDVEINVVPALRISDYPMSKILKICDRIKHTRTFLEINLESHIPFNMENAPCILLSQLKYMRALSFKCFPLESLPDSLIHLRYLNLSETYIVTLPESLGNLYNLQILKLTLCCNLKMLPVSMQDLVNLRYLDIWGTMLHEMPKGMSKLESLHFLSHYVVGKDEENKIKELGALTNLEQSISITKLENVVNSSEALEARMFDKDGIDSLWLSWSWYEGENMVDFEIERDILDKLQPSIGLKELAIDGYRGTTFPDWLGHSSYHNITEVTLDGCSNCCRLPSLGQLASLKHLTISKFVNLGIVGAEFYFCQNDESCLETPFPMLETLEFSSMPWWEEWHSSEFSAFPRLRVLTINWCPMLKGDLPNHLPSLQSLEIQNCELLNYCVPRTPGMTSLSIQGSNEVRIGELPPLLGNLSIERSDHLVQSVVEATTLTQLTCLTSLRISGCSSQIWFPVSAIPPSLQKLTIEDCRELEFQMDGQHHSLQQLLIEKSCSSLTSFSLLDSFPNLVRVEIKYCGKMESVAVSRSLPRLRSLEIDDCWSLKSVSTLWMAAPQLEQLSLLKCPEIDLSPTGDPHRSLRSLTISYYQKQVISAAFMNLQFHGLTHLRIEGGYRESESVKCFPKEGWLPASLESLGLVGMKSVETLECKGLAHLTSLQRLRIDGCAKLENIEGEKLPASLIRLTIVRSPLLSKRCEMKDPQLWPKISHIPGIQVDDRWIW* 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3266 991 Gene3D - 27 197 IPR027417 -
Amo12g3266 991 Gene3D Ribonuclease Inhibitor 829 966 IPR032675 -
Amo12g3266 991 Pfam NB-ARC domain 47 268 IPR002182 GO:0043531
Amo12g3266 991 Gene3D - 203 282 IPR042197 -
Amo12g3266 991 Gene3D Ribonuclease Inhibitor 690 828 IPR032675 -
Amo12g3266 991 PRINTS Disease resistance protein signature 143 157 - -
Amo12g3266 991 PRINTS Disease resistance protein signature 240 254 - -
Amo12g3266 991 PRINTS Disease resistance protein signature 70 85 - -
Amo12g3266 991 PRINTS Disease resistance protein signature 638 654 - -
Amo12g3266 991 Gene3D Ribonuclease Inhibitor 291 689 IPR032675 -
Amo12g3266 991 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 29 299 IPR027417 -
Amo12g3266 991 PANTHER DISEASE RESISTANCE PROTEIN RP 33 299 IPR044974 GO:0006952
Amo12g3266 991 PANTHER DISEASE RESISTANCE PROTEIN RP 302 726 IPR044974 GO:0006952
Amo12g3266 991 SUPERFAMILY L domain-like 320 694 - -
Amo12g3266 991 PANTHER - 302 726 - -
Amo12g3266 991 PANTHER - 33 299 - -
Amo12g3266 991 SUPERFAMILY L domain-like 664 978 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3266 Amo-Chr12 121583273 121586932 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g3266 67 256 WRKY Transcription Factor Family AT5G45050 26.108 4.46e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g3266 - - ahf:112757511 1417.91