Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3262 ATGGCTGCAGCACTTGTGGGTGGAGCTGTTCTGTCTTCCATTTTTAATGTTGTTTTTGACAGGATGTCCTCACCTGAAGTTGCCAATTGGATCAAAGGGAAGAAGCTTACCCAGAAGCTGCTTGAAAGGTTGAAGACTACTCTTTATGCTGTTCAAGCCTTTCTCATCGATGCTGAGCAGAAGCAGATCAAGGAGAGAGCTGTCAAGGACTGGCTCGATAGTCTCAAAGATGCTATGTATGTTGCTGATGACTTGCTGGATGAAGTCTTCACCAAAGCTGCCACTCAGAAGGATCCAGGTACCTTCTTCTCTCGTTTTCTCAATTTGCAAGATAGGGAGATAGCAAACAGGATGGAAGAAATAATTGAGAGGATAGAGTCTATTGTGAAGCAAAAAGGGACACTTGGTCTTAGAGAGATTCCTAAGGAGAACATGTCATGGAGGATCACAACATCTCTGGTTGAAAGATCTAGTATATATGGCAGGGAAGAAGACAAGGAGGCCATAGTGAAATTGTTGTTGGATGATGATGACACTGGTGATGGTGATATATCTGTGATTCCCATTGTGGGCATGGGCGGAATAGGAAAGACTACTTTGGCCCAATTGGTTTACAATGACGAAAAAGTGAAGGAGAATTTTGATTTTCGAGGTTGGGTTTGTGTGTCTGAAGAGTTTGATGTTATTAAGGTCACCAAGACTATAATTGAGGCAATAACTTCGACTTCTTGTAACTTGAAAGATTTGAATTTACTTCAACATGATTTAAAGGAAAGATTGTCAAGACAAAAATTCTTTGTTGTCTTGGATGACGCATGGAATGAGGATTATGAAGATTGGAGTAGGCTTCTAAAACCATTTCAGAATGGGGCGAAGGGGAGTAAAATTCTCATAACCACTAGAAGTAAAAAAGTGGCTTCTGTGGTGCAAACTATTTCACCTTATGAACTAAGTTTACTGTCGGATGAAGATTGTTGGTTAGTGTTTTCAAAACACGCACGCCTTTCCACTGACTCTATGGAAAATCCAACTCTGAAAAAAGTCGGCAAAGATATTGTAAAGAAGTGTGATGGATTGCCCTTGGCAGCTCAAGCCCTCGGAGGCTTATTGCGTGGAAATTTTGATGTTGAGTATTGGAATCATATATTGAAGAGTGAGGTATGGAAATTCTCCAATGACAAGATAAAAGTTGTTCCGGCTTTAAGAATCAGTTATTACTATCTTCCTTCATGTCTGAAAGAGTGCTTTGTTTATTGCTAG 1260 0.4032 MAAALVGGAVLSSIFNVVFDRMSSPEVANWIKGKKLTQKLLERLKTTLYAVQAFLIDAEQKQIKERAVKDWLDSLKDAMYVADDLLDEVFTKAATQKDPGTFFSRFLNLQDREIANRMEEIIERIESIVKQKGTLGLREIPKENMSWRITTSLVERSSIYGREEDKEAIVKLLLDDDDTGDGDISVIPIVGMGGIGKTTLAQLVYNDEKVKENFDFRGWVCVSEEFDVIKVTKTIIEAITSTSCNLKDLNLLQHDLKERLSRQKFFVVLDDAWNEDYEDWSRLLKPFQNGAKGSKILITTRSKKVASVVQTISPYELSLLSDEDCWLVFSKHARLSTDSMENPTLKKVGKDIVKKCDGLPLAAQALGGLLRGNFDVEYWNHILKSEVWKFSNDKIKVVPALRISYYYLPSCLKECFVYC* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3262 419 Gene3D - 143 313 IPR027417 -
Amo12g3262 419 PANTHER - 46 419 - -
Amo12g3262 419 Gene3D - 319 408 IPR042197 -
Amo12g3262 419 Pfam Rx N-terminal domain 10 99 IPR041118 -
Amo12g3262 419 Pfam NB-ARC domain 163 384 IPR002182 GO:0043531
Amo12g3262 419 PANTHER DISEASE RESISTANCE PROTEIN RP 46 419 IPR044974 GO:0006952
Amo12g3262 419 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 419 IPR027417 -
Amo12g3262 419 Gene3D - 27 132 - -
Amo12g3262 419 PRINTS Disease resistance protein signature 356 370 - -
Amo12g3262 419 PRINTS Disease resistance protein signature 259 273 - -
Amo12g3262 419 PRINTS Disease resistance protein signature 186 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3262 Amo-Chr12 121558604 121559863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g3262 183 372 WRKY Transcription Factor Family AT5G45050 28.205 1.42e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g3262 - - ahf:112730663 523.472