Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3257 ATGGCTGCAAAACTTGATGGTGGAGCTTATCTCACTTCCTTTGTTGATGCTATTTTGGAGAAGCTTTCTCCAATGCTTGAAGACGACTCATTCGTGGAAAGGAACATCTTGCTTGGAAGGTTGGAGAAAAGTCTGTATGAGGTTGGACCTGTTCTTGATGATGCTGAGCAGAAGCAGTTCACTGACAAGAGAGTCAAGAAGTGGCTTGTTGATCTCCAAGATGCTCTCTATTTCGCTGATGATTTGGTTGATGAACTCTCCACTAAGGCCGCCATCGCCACCACTCTAAGAGATCCAGGTATCTCTTCTTCCTGTTCTTCTCTTGTTGATTCATATATTGAAGATACTGGTGACATGGAAAAAATAGTTGGTACACTAGAGTGTGTTGTAGTAAAGAAAAATTATCATCGTCTGAAAGAGTGCGCCAAGGTGGACATGTCGTCATGGAGAACTCCATCCACATCTCTCGTTGCAAGTTCTGACATTTTTGGTCGGCACAAAGACAAGGAGGAGATAATCAAATTGCTGTTAGATGATACTCGTCGTGCTGAATCTTCTGTGTCTGTGATCCCCATTGTGGGTATGGGCGGAATTGGAAAAACTACTCTGGCTCAACTGGTTTACAGTGATGTCAAAGTGGTGGAAAATTTTGACACGAGAGTATGGGTGTGTGTTGCTGAAAATCCCGACCCTGTTCATGTTACAAGGACAATAATAGGAGCAATAGATTCCTATCCCTGTACCATGGACAATTTTGATTTTCTTCAGACTAATTTGAAGAAAAGGTTAACAGGAAAGAAATTCTTAGTTGTTTTGGATGATGTCTGGCATGATCAACGAGACACATGGGAGGATTTCCTGAAACCTTTTCGGGATGGGAATATTGGAAGTAAAATTCTCTTAACAACCCGGAGTGAAAAGGTTGCTTCTGTGTTCGTAGCTCCTAATCGACATTATCAATTAAGTTTATTGTCAGGCGAAGATTGTTGGTCGGTGTTTTTGAAGCATTCATCTGTTTCTACTAATTCCGAACAATATGCAACTCTAGAACCAATTGGTAGAAAAATTGTTGAAAAGTGTAAAGGGCTACCTTTGGCTGTGAAGACACTTGGAGGCTTAGTGCGCAATAAGTATAATGTAAGGGATTGGGAGAATATACTTAAAAGTGAAATTTGGGAACTCCCGGAGGATGAAAGTAAGATTGTTCCTGCATTAAGAGTTAGTTATCACTACCTCCCTTCACATTTAAAGCGATGTTTTGTTTATTGCTCATTGTTTCCTGAAGATTATCGATTTGGCAAAAATGAATTAATCTTGTTGTGGATGGCTGAAGATCTCTTACGACCGACAGAAAACAACACATTAGAAGATATTGGTTGTGCTTATTTTGATGAATTAGTTGCAAGATCGTTTTTTCAACTTTCTAGTGAATTATTTGTAATGCACGATCTCATGCATGATCTAGCAACGTTTTTTGCTGGAAAATTTTTTTTCAGAGTCGACGAATTTGGCAATCCACACATGGCAAATAGCAAAAGTCGTCATTTGTCATATAATCGGCATCCAATCTCAAATTTTCCAGAGGCCTATAATGGAACAATATATACGAGAACATTTCTACCTATTCATGTTCAATCAAATGATATTGAATGTTATTTTTGGCTACAACAATTAAAGTGTTTAAGAGTTTTGTCATTTCGTCGCTTTAAAATCCTGTCATTGCCTGATTCAATAGGTGAGTTGATCCATTTGCGTTATTTGGATCTCTCTGAAACACGTATTGTCACACTCCCTGAATCACTGTGTAAATTATACAATCTCCAAATATTGAAGTTGAGGCATTGTGAGAAGCTAGAGATGCTTCCCAGTCACATGCAAGATCTTGTGAACCTACGCCATCTTGATATGAGGGGAGCTCATAGTTTAAAAGAGATGCCAAAAGGAATGAGTAAGTTAAAGCATCTGAACTTCTTAAGTGGTTATATTGTCGGGAAGCAAGTAGTAGAGAATGGGATAAGAGAATTGGGAGCACTTGACAATCTTCATGGCTCACTTTGCATTTCCAAATTAGAGAATGTGGACAACAGCGGTGAAGCTTTGGAAGCAAAGATGGGTAACAAGAAGCACCTCAGCATTTTAGATTTGGAATGGCTTCCAGATGGTAGTACTGTTGATGTTGAAAAAGAGAGAGATATACTTGACAAGTTACAACCTCACCGAAACCTGGAAGAGTTATCAATTCATGGTTATAGGGGTGAAATATTCCCTGATTGGTTAGGTTTTTCTTGCTACTCCAATATGACCGAATTGGTTCTGAGTAGCTGTAAGAGTTGTCGTCGGGTTCCTTCACTGGGACAGTTACCCTCTCTGCAGCATCTGGAAATAAAGGGACTTGATGGGTTGGAGAGAATTGGTGGTGAGTTTTACAACAACGCTGAATCATGTCATCAGGGCACACCCTTCAGATCTCTTCAAACTCTGATGTTTTGTGATATGCCTAGCTGGCGGGAGTGGCATATTCCTGATGGGTTTGATGGATTTCTGAAACTTAAAAGTCTTTTAATAGAAGACTGTCCGGTGTTAAGTGGAGATTTGCCAGCTCACCTTCCGGCTCTGAAGGATCTTACCATTCATTGTTGCGAAGAGCTTGCGTGTTCACTTCCAAGTGCTCCCAAGCTTCACCTATTAACTGTAGATTGTCCTCGAGAAGCTGTGGATTGGGGACTGCATGCCGTAGTAATTGTCGACACTAAGCTGGCGAAGTATGTAGTGGAGTGTCTACCCGACATCCAATCGCCGTATCTCCAAAAGTTGTATATCGAGGAGTGCGAGTCAGCAATATCAATTTCAGGAGATTATTTGCCCGATTCATTACAATATCTGAGTGTCAAGGATTGTTCAGAATTAACAATCTCAGAGCCACTGCAACACAAGTCGTTAACGGATATATGTATGGACAGGTGTGAATCACTGACGAGGTTGCCATTGGGGGCCCTTCCAAATCTCAAGGCACTCCATATCTCACATTGCCCTGAAATGGATTGTTTTGGAGAGGAGTGCCTCCCGCCGAGCTTGACAACTCTTCGGATCAGAAGATGCCAGAAACTGGAGAGGTGGATAACATCAAAGGGTTTACAGAGAGAAGGCCTTACCCATCTTATCCTTGAAAAATGGAAAGAAGTTAAGTGGTTCCCAAGAGAGGGTTGCCTTCCTGCTTCCCTCCAGTATCTATCTTTGTCGTACTTTTCAAATCTGGAGACGCTAGACTGCAAGGGCCTTCACCAACTCACCTCCCTCCAAAAATTAACAATTGAATGCTGTCCAAAGCTGGAGAATATCACACAACAAAACCTGCCTGCCTCCATATTGAAACTCATCATCAAGGGAGAATGTCCATTGAAGAGTAAGCTGGAAGAGATGAACGACACTCGGATTCAATTCGAAACAGCTTACAGTCAGACTCAGATTATATGTCAGATTATGAGTCGTCTTGATGATTTCCCACTTTTTGTGCACCATGCAAGTATTTTGTCTGATATACATGGAAGAGCTTTCTTGCCTCCCTTCAATTTCCGAATCTATTATCCCTTGTCAACACTGGAAAATGGAACTACAAGCCACAAGGGCCTTCAACTCCAGAGCTCCCAAGAGTTAATGCCTATTCTTAGCAATGAATTCACCATTCTTTTTCCAAGTGAAAAGGTGAAGCTTCATTGTTTCCAGATTTATTCACTAATATGGAATTATCTCATTATGATTCTTATGTTAAACTTATCATTTTTTGTTCTATACATGTTTCTCATTATCCAGACCCTGAATTTCAATATGGCTTTTTTCTTTAGAATTGGTGAATCTATGACTGGGACTTCCCTTCATTCAAGTTTCACGATCAACCATCTCTGGTTCCCACTTTGGGTTCTTCTCTGCACTTAG 3933 0.4068 MAAKLDGGAYLTSFVDAILEKLSPMLEDDSFVERNILLGRLEKSLYEVGPVLDDAEQKQFTDKRVKKWLVDLQDALYFADDLVDELSTKAAIATTLRDPGISSSCSSLVDSYIEDTGDMEKIVGTLECVVVKKNYHRLKECAKVDMSSWRTPSTSLVASSDIFGRHKDKEEIIKLLLDDTRRAESSVSVIPIVGMGGIGKTTLAQLVYSDVKVVENFDTRVWVCVAENPDPVHVTRTIIGAIDSYPCTMDNFDFLQTNLKKRLTGKKFLVVLDDVWHDQRDTWEDFLKPFRDGNIGSKILLTTRSEKVASVFVAPNRHYQLSLLSGEDCWSVFLKHSSVSTNSEQYATLEPIGRKIVEKCKGLPLAVKTLGGLVRNKYNVRDWENILKSEIWELPEDESKIVPALRVSYHYLPSHLKRCFVYCSLFPEDYRFGKNELILLWMAEDLLRPTENNTLEDIGCAYFDELVARSFFQLSSELFVMHDLMHDLATFFAGKFFFRVDEFGNPHMANSKSRHLSYNRHPISNFPEAYNGTIYTRTFLPIHVQSNDIECYFWLQQLKCLRVLSFRRFKILSLPDSIGELIHLRYLDLSETRIVTLPESLCKLYNLQILKLRHCEKLEMLPSHMQDLVNLRHLDMRGAHSLKEMPKGMSKLKHLNFLSGYIVGKQVVENGIRELGALDNLHGSLCISKLENVDNSGEALEAKMGNKKHLSILDLEWLPDGSTVDVEKERDILDKLQPHRNLEELSIHGYRGEIFPDWLGFSCYSNMTELVLSSCKSCRRVPSLGQLPSLQHLEIKGLDGLERIGGEFYNNAESCHQGTPFRSLQTLMFCDMPSWREWHIPDGFDGFLKLKSLLIEDCPVLSGDLPAHLPALKDLTIHCCEELACSLPSAPKLHLLTVDCPREAVDWGLHAVVIVDTKLAKYVVECLPDIQSPYLQKLYIEECESAISISGDYLPDSLQYLSVKDCSELTISEPLQHKSLTDICMDRCESLTRLPLGALPNLKALHISHCPEMDCFGEECLPPSLTTLRIRRCQKLERWITSKGLQREGLTHLILEKWKEVKWFPREGCLPASLQYLSLSYFSNLETLDCKGLHQLTSLQKLTIECCPKLENITQQNLPASILKLIIKGECPLKSKLEEMNDTRIQFETAYSQTQIICQIMSRLDDFPLFVHHASILSDIHGRAFLPPFNFRIYYPLSTLENGTTSHKGLQLQSSQELMPILSNEFTILFPSEKVKLHCFQIYSLIWNYLIMILMLNLSFFVLYMFLIIQTLNFNMAFFFRIGESMTGTSLHSSFTINHLWFPLWVLLCT* 1311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3257 1310 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 423 IPR027417 -
Amo12g3257 1310 SUPERFAMILY RNI-like 821 1123 - -
Amo12g3257 1310 PANTHER OS05G0414200 PROTEIN 35 1112 - -
Amo12g3257 1310 Gene3D - 15 121 - -
Amo12g3257 1310 PANTHER DISEASE RESISTANCE PROTEIN RP 35 1112 IPR044974 GO:0006952
Amo12g3257 1310 Pfam Rx N-terminal domain 14 91 IPR041118 -
Amo12g3257 1310 SUPERFAMILY L domain-like 480 888 - -
Amo12g3257 1310 Pfam NB-ARC domain 167 389 IPR002182 GO:0043531
Amo12g3257 1310 Gene3D - 146 314 IPR027417 -
Amo12g3257 1310 Gene3D - 323 407 IPR042197 -
Amo12g3257 1310 Gene3D - 408 490 IPR036388 -
Amo12g3257 1310 Gene3D Ribonuclease Inhibitor 905 1144 IPR032675 -
Amo12g3257 1310 PRINTS Disease resistance protein signature 997 1013 - -
Amo12g3257 1310 PRINTS Disease resistance protein signature 189 204 - -
Amo12g3257 1310 PRINTS Disease resistance protein signature 262 276 - -
Amo12g3257 1310 PRINTS Disease resistance protein signature 360 374 - -
Amo12g3257 1310 Gene3D Ribonuclease Inhibitor 539 904 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3257 Amo-Chr12 121452977 121465801 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g3257 187 489 WRKY Transcription Factor Family AT5G45050 25.312 9.94e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g3257 - - ahf:112709990 1383.62