Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3246 ATGGCTGCAAAACTTCAGGGTAGAGCTTATCTCTCTTCCTTTGTTGATGCTGTTTTGAACAAGCTCTCTTCACTCGATGTCAACTCAACCCCCGAAGCAAAGAAGTTAGATGACCAGAAGTTGCTTCAAAAGCTGAGGAAGAGTCTCCGTGCCACTCGACCTGTGCTTGATGATGCTGAGCAGAGGCAGATCCGAGACCAAGAAGTCAACAATGATGACGATGAGATGGGGGTAGTGACTAGCATGCAAGACATAGTTGACAAACTAGAGTCTATTGTTGAAGAGAAAGATGATCTTGGTCTGAAACAAGGGGATGCCAAAGATCTGGAGGACATGTCATGGAGAATTCAATCATCTCTGCTTGAAAGTTCTGATATATATGGCAGGAACGATGACAAGGAGGCCATCATAAAATTGTTACTCGATGAAACTTGTGATGATATATTGTCTGTGATCTCTATAGAAGGTATAGGTGGAATTGGAAAGACTACCTTGGCTCAGTTAGTTTACAATGATGCCAGAGTGAAGGAGAAGTTTGCCATTAAAGCATGGGCGTGTGTTGCAACAAAATTTGATCCTGTTATTGTTACCAAGTCTATAATGGAAGACATAGCTTCTCCTTGTAATAAGGTTAACTTGAATTCGATTCAAACCGAATTGAAGGAAAAGTTAACAGAAAAGACATTCTTGGTAGTTTTAGATGATGTTTGGGATAATCAGCAAAATTTGTGGGACAATTTTCTAAAACCTTTTTTGAGTGGAAATAAAGGAAGTAAAATACTTTTAACTACTCGTATTAAAAATGTTGATTCTGTAGTGTCAACTACAAATCTACATTATAAACTAGATACATTGTCCAACGAAGATTGCTGGTCTTTGTTTTTGAAACATTCATCTATTTCTACTAGTTCTAGACAATATGAAATCTTAGAACAAATTGGTAAAAAAATTGTTGAAAAATGCAAGGGATTACCTTTGGCTGTGAAGACACTTGGGGGTTTATTGCGCAGTAARGATAAAGTAGAGGATTGGGAGAATTTACTGAGAAGTGAAATTTGGGAGCTTCCSGARGATGAGAGTAAGATTGTTGCTGCATTAAGAGTTAGTTATCACTATCTTCCTTCAAATTTAAAGCGGTGTTTTGTTTATTGCTCGTTATATCCCCAAGATTATCAATTTGACAAAGATGAATTAATCTTGCTGTGGATGGCTGAAGATCTCTTACAACCAATGGAAAAAAACACATTAGAAAATATTGGTTGTGCTTATTTTGAGGAATTAGTTGCAAGATCATTTTTTCAACTTTCTAGTAAAGATGCTGGCTTATTTGTAATGCATGATCTCATGCATGATTTAGCATCATTTTTTGCTGAAAAATTCTATTTCAGAGTGAGAGAATTAGGAGATCCACAAAAGATTTGCAGCAAAACTCGTCATTTGTCATACATGGTAAATCCCGATGATTCAAGATTTGGAGAGGCCTACAAGGGAGCAATACATATGAGAACGTTTCTAAATGTATGTCGTGGTCCTCTATCAATTACGTTAGAAAGTGATTCTTTGCTCTTACAATTACAAATGAGGTATCTAAGAGTTTTGTCATTTAAACATTTTTCTATTGAATCATTGCCTGATTCAATAGATAAACTGATCCATTTGCATTATTTGGATCTCTCTTATACATCTATTTTGACATTGTCCGAGTCATTGTGTAAATTATACAATCTCCAAACATTGAAGTTGAGTTATTGTAAGAAGCTGGAGATGCTTCCTAGCCGTATGCAAGATCTTGTGAACCTGCGCCATCTTGATACCAGAGGATCTAATTCTTTGAAAGAGATGCCGAAGGGAATGAGCAAGTTAAAGCACCTGAACTTCTTAAGTGGTTATATAGTCGGGGAGCAAGTGGAGAATGGGATAAGAGAATTGGGAGCACTTGACAATCTTCATGGCTCACTTTGCATTTCCAACTTAAAGAATGTGAAAGACAGCGGTGAAGCTTTGGAGGCAAAGATGGATAGCAAGGAGCACATCAGCATTTTAGAATTGAAATGGCGTAGAGAAGGTGATACTGTTGATGTTGAAACTGCAAGAGATATACTTGAGGAGTTGCAACCTCACAGAAACTTGAAAGAGTTATCAATTGATGGTTATAGGGGTGAAATATTCCCTGATTGGTTAGGCCTTTCTTGCTACTCCAATTTAACCGACTTGAGTATGTATCGTTGTAAGAATTGCCGTCAGCTTCCTTCACTGGGACAGTTACCCTCTCTAAAGGATCTCAGGATTTTTGAATTCGATGGGTTGGAGAGAATTGGTGGTGAGTTTTACAACAACGCTGAATCATCTCATCAGGGCACACCCTTCAGATCTCTTCAAACTCTGGAATTTGCTCATATGCCTCGCTGGCGAGAGTGGCATATTCCTCATGACTTTGATGGATTTCCGAAACTTAAAAGCCTTTCCATAGTCAACTGTCCGGTGTTAAGTGGAGATCTGCCTGCTCACCTTCCAGCTCTGGAGAAACTTAACATTGTTGACAGCGACGAGCTTGCATGTTCACTGCCGAGAGCTCCCAAGCTTCACCAATTACTTGTAATGGGTCCTTTGTATGAGTCTGAGGGGTATAAGCATTTATCGAAACCGCATGAGGTAGTAATTTTAGAATCTTTGCTTACCAAGTCCGTATTGGAGTGCCTGCCCCACATCCAATGTTCGTGTGTCCAACGTTTGACAATCGAGAATCTTTGGCCAGCAATATCAGTTTCAGGAGATAATTTGCCCGATTCATTACAATATCTGCAAATCACTGGGTGTTCAGACTTATTCTCAGGGCCACTGCATTCCAAGTCCCTAACGGAGATACTTGTCCAAGAATGTGATTCACTGACGTTATTGCCATTGGGGGCCCTTCCAAATCTGAAGACACTCTCTATCATAGATTGCCCAGAAATGGATTGTTTTGGAGAGGAGTGCCTCCCGCCGAGCTTGACAACCCTTCGGATCAGAAGATGCCAAAAACTAGAGAGGTGGATAACTTGGAGGGGTTTGCAGAGTGAAGGCCTTACCCGTCTTTTCCTTGAAGACTGGGATGAAGTTAAGTCGTTCCCGAGAGAGGGTTGCCTTCCTGCTTCCCTCCAGTATCTATCTTTGTCGTACTTTTCAAATCTGGAGACGCTAGACTGCAAGGGCCTTCACCAACTCACCTCCCTCCAAAAATTAAAAATTAAATACTGTGGAAAGCTGGAGAATTTCACACAAGAAAACCTGCCTGCCTCCTTATCAAAATTCATCATCAACAGTGAATGTCCATTGAGGAGTAAGCTGGAAGAGATGAACGACCCACGGATTCAATTCGACACAGGTAATTGTTTTTGCTCTCATCTTCCCTAA 3393 0.3991 MAAKLQGRAYLSSFVDAVLNKLSSLDVNSTPEAKKLDDQKLLQKLRKSLRATRPVLDDAEQRQIRDQEVNNDDDEMGVVTSMQDIVDKLESIVEEKDDLGLKQGDAKDLEDMSWRIQSSLLESSDIYGRNDDKEAIIKLLLDETCDDILSVISIEGIGGIGKTTLAQLVYNDARVKEKFAIKAWACVATKFDPVIVTKSIMEDIASPCNKVNLNSIQTELKEKLTEKTFLVVLDDVWDNQQNLWDNFLKPFLSGNKGSKILLTTRIKNVDSVVSTTNLHYKLDTLSNEDCWSLFLKHSSISTSSRQYEILEQIGKKIVEKCKGLPLAVKTLGGLLRSKDKVEDWENLLRSEIWELPEDESKIVAALRVSYHYLPSNLKRCFVYCSLYPQDYQFDKDELILLWMAEDLLQPMEKNTLENIGCAYFEELVARSFFQLSSKDAGLFVMHDLMHDLASFFAEKFYFRVRELGDPQKICSKTRHLSYMVNPDDSRFGEAYKGAIHMRTFLNVCRGPLSITLESDSLLLQLQMRYLRVLSFKHFSIESLPDSIDKLIHLHYLDLSYTSILTLSESLCKLYNLQTLKLSYCKKLEMLPSRMQDLVNLRHLDTRGSNSLKEMPKGMSKLKHLNFLSGYIVGEQVENGIRELGALDNLHGSLCISNLKNVKDSGEALEAKMDSKEHISILELKWRREGDTVDVETARDILEELQPHRNLKELSIDGYRGEIFPDWLGLSCYSNLTDLSMYRCKNCRQLPSLGQLPSLKDLRIFEFDGLERIGGEFYNNAESSHQGTPFRSLQTLEFAHMPRWREWHIPHDFDGFPKLKSLSIVNCPVLSGDLPAHLPALEKLNIVDSDELACSLPRAPKLHQLLVMGPLYESEGYKHLSKPHEVVILESLLTKSVLECLPHIQCSCVQRLTIENLWPAISVSGDNLPDSLQYLQITGCSDLFSGPLHSKSLTEILVQECDSLTLLPLGALPNLKTLSIIDCPEMDCFGEECLPPSLTTLRIRRCQKLERWITWRGLQSEGLTRLFLEDWDEVKSFPREGCLPASLQYLSLSYFSNLETLDCKGLHQLTSLQKLKIKYCGKLENFTQENLPASLSKFIINSECPLRSKLEEMNDPRIQFDTGNCFCSHLP* 1131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3246 1130 PANTHER DISEASE RESISTANCE PROTEIN RP 26 944 IPR044974 GO:0006952
Amo12g3246 1130 SUPERFAMILY L domain-like 444 848 - -
Amo12g3246 1130 Pfam NB-ARC domain 130 350 IPR002182 GO:0043531
Amo12g3246 1130 Gene3D Ribonuclease Inhibitor 503 870 IPR032675 -
Amo12g3246 1130 SUPERFAMILY RNI-like 712 1097 - -
Amo12g3246 1130 PANTHER OS05G0414200 PROTEIN 26 944 - -
Amo12g3246 1130 Gene3D - 369 454 IPR036388 -
Amo12g3246 1130 PRINTS Disease resistance protein signature 151 166 - -
Amo12g3246 1130 PRINTS Disease resistance protein signature 321 335 - -
Amo12g3246 1130 PRINTS Disease resistance protein signature 223 237 - -
Amo12g3246 1130 PRINTS Disease resistance protein signature 571 587 - -
Amo12g3246 1130 Gene3D - 111 278 IPR027417 -
Amo12g3246 1130 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 115 384 IPR027417 -
Amo12g3246 1130 Gene3D - 284 368 IPR042197 -
Amo12g3246 1130 Gene3D Ribonuclease Inhibitor 890 1118 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3246 Amo-Chr12 121280464 121284012 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g3246 121 632 WRKY Transcription Factor Family AT5G45050 21.589 4.98e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g3246 - - aip:107628003 1241.48