Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3199 ATGGCTGCAAAACTTGAAGGTGGTGGAGCTTATCTCTCTTCCTTTGTAGATGTTGTTTTAAACAAGCTGTCTTTAGTACTTGATGACGACGACTCATTCACCGAAAGGAACAACTTGCTTGGAAGATTGGAGAAAAGTCTGTCTGATGTTGGACCTGTTCTTGATGATGCTGAGCAGAAGCAGTTCACTAACGAGAAAGTCAAGAGTTGGCTTGATGATCTCCAAGATGCTCTCTATAAGGCTGATGACTTGCTCGATGAACTCTCKACTGAAGCTGCCATTGCCACCCAAAGGGATCCAGGTAACTCTTATTCCTGGTCTCATCCMGTTGATTCATATATTAATTATAGTYGTGGCASGGAAAAAGTAGTTCAAAGACTAGAGTATGTTGTAGCACGCAAAAATTTACTTCATCTGAAGGAGAGTGCCAAGGTGGACATGTCATCATGGAGAACTCCATCCACATCTCTCGTTGTAAGTTCCCACATATTTGGTCGGGACAACGATAAGGAGGAGATAATCAAATTGTTGCTAGATGATGGTTGTCATGCTGAATCACCTGTCACTGTGATCCCCATTGTGGGTCTGGGTGGAATAGGAAAAACTACTTTGGCTCAATTGGTTTACAATGATGCCAAAGTGGTGAAAAATTTTGACCTTAAAGTGTGGGTGTGTGTTGCTGAAAACTTTGATCCTGTTAACCTTACACGGATTATACTAAAGAAAATAACTTCTTGTTCTTGTGACACGGATGACTTTGAATCACTTCAGACTGATTTGAAGGATAAGTTGGTACGGAAGAGATTCTTAGTTGTTTTAGATGACGTCTGGGATGATCGAGGGGACATATGGGAGGATATTCTAAAACCTTTTCAGTATGGGAATAAGGGAAGTAAAATTCTCTTAACAACCCGTAGTGAAAAGGTTGCTTCTATGTTCACAGCTATTAAACAACATTACCGACTAGGTTTATTGTCTGATCAAGACTGTTGGTCTGTGTTTCTCAAGCACTCATCTCTTTCTATTAATTCTGAACAACATGCAACTTTAGAACCAATCGGTAGAAAAATTGTTGAAAAGTGTAAGGGGTTACCTTTGGCTGTGAAAACACTTGGAGGTTTATTGCGCCATAAGTATGATGTAGGGGATTGGGAGAATATACTTGAAAGTAAAATTTGGAAACTCCCAGAAAATGACAGTAAGATTATTCCTGCATTAAGAGTAAGCTATCACTATCTTCCTTCACATCTAAAGCGGTGCTTTATTTACTGCTCATTATTTCCTGAGGATTATCAATTTGACAAAAATGAATTAATCTTGCTGTGGATGGCTGAGGATCTCGTACTACCAAACAAAAACTACACGTTAGAAAATATTGGTTGTACATATTTTGATGAGTTAGTTGCAAGGTCATTTTTTCAACCTTCTAGTATTGATGTTGGTGTATTTGTAATGCATGATCTCATGCATGATTTAGCAACATTTTTTGCTGGAAAGTTCTATTTCAGAGTCACAGAATTTGGAGATCTGCAAAAGATTTACAACAAAACTCGTCATTTGTCATATATGGTAAATCCTAACGATCCAGTCATACGACTTGGAGAGGTCTACAAGGGAGCAATTCATATGAGAACATTTCTAGCTGTTCATTTGCTTCATCTTTATGAATCAATTGATATAACAAGTGATTCTAGGCACTTACAATTATTAGAATTGAGGTGTTTAAGAGCGTTGTCATTTAAATCTTTTTCTATTGAGTCATTGCCGGATTCAATAGATAAACTGATCCATTTACATTATTTGGATCTCTCTTACACACCTATTGTGGAATTGTCTGAGTCATTGTGTAAATTACACAATCTCCAAACGTTGAAGTTGACTTATTGTGTTCATCTAAAGATGCTACCTAGCCGCATGCAAGATCTTGTAAACCTGCGCCATCTTGATATTGAAGAAACGCCTTCGTTGATAGAGATGCCGAAGGGAATGAGCAAGTTAAAACATCTGAACTTCTTGAGTGGTTATATTCTCGGCAAGAAGGAGGAGAATGGAATAAGAGAACTGGGATCACTTGACAATCTTCATGGCTCACTATGTATTTCCAACTTAAAGAATGTCAACAACAGCCGTGAAGCTTTGGAGGCAAAGATGGCTAACAAGAAGCACATCAACGTTTTAGAATTGAAATGGATTCCAGATAATGATGACGACGACGATGATGTTGATTTTCAAAAAGAGAGAAGCATTCTTGAGTTGTTACAACCTCACCGAAACTTGAGAGAGTTATCAATTGATGGTTATAGGGGTGAAATATTCCCTGATTGGTTAGGCCTTTCTTGCTACTCCAATTTAACCGACTTGAGTATGCATCGTTGTAAGAATTGCCGTCAGCTTCCTTCACTGGGACAGGTACCCTCTCTGCAGCATCTGTATATAACGGGACTTGAAGGGTTGGAGAGAATTGGTGGTGAGTTTTACAATAACGCTGAATCATCTCATCAGGGGACACCCTTCAGATCTCTTCAAACTCTGAGATTTACTCATATGCCTCGCTGGCGAGAGTGGCATATTCCTCATGACTTTGATGGATTTCCGAAACTTAAAAGCCTTTCCATAGTCAACTGTCCGGTGTTAAGTGGAGATCTGCCTGCTCACCTTCCAGCTCTGGAGAAACTTAACATTGTTAACAGCGACGAGCTTGCATGTTCACTGCCGAGAGCTCCCAAGCTTCACCAATTACTTGTAATGGGTCCTTGGTATGAGCCTGATGAGTATGCGTATGAGCATTTATCGAAACCGCATGAGGTAGTAATTTTAGAAACTTTGCTTACCAAGTCCGTATTGGAGTGCCTGCCTCACATCGAATGGTCGTGTGTCCAACGTTTGACAATCGAGAATCCTTGGCCAGCACTATCATTTTCAGGAGATTATTTGCCCGATTCATTACAATATCTGCAAATCACTGGGTGTTCAGACTTAACATTCTCAGGGCCACTGCATTCCAAGTCCCTAACGGAGATACTTGTCGAAGAATGTCGTTCACTGACGTTGTTGCCATTGGGGGCCCTTCCAAATCTGAAGACACTCTCTATCTCAGATTGCCCAGAAATGGATTGTTTTGGAGAGGAGTGCCTCCCGCGGAGCTTGACAACTCTTGAGATCAGTAGATGCCAGAAATTAGAGAGGTGGATAACTTGGAGGGGTTTGCAGAGTGAAGGCCTTACCCGTCTCATCCTTGAAGGCTGGAAGGAAGTTAAGTCGTTCCCGAGAGAGGGTTGCCTTCCTGCTTCCCTCCAGTGGAAGCAGGAGTTTCAATTCATGGATGTGGTAAGAGTTGAATGTTCCAAGAAATTCATAGATATGATAATGCAAGCATTCTATGAAAACCAGTCCAAGGATGTTGTGGTTTCAAGCGTCTTGTTTCTCATGATCCAGACCCTGAAATACAATATGGATTTCTTTGCTGGAATGCTGAAATACAATACGACTGGGACTGCCATTCGTTCAAGTTTCATGGTCAACCATTACTAG 3531 0.4053 MAAKLEGGGAYLSSFVDVVLNKLSLVLDDDDSFTERNNLLGRLEKSLSDVGPVLDDAEQKQFTNEKVKSWLDDLQDALYKADDLLDELSTEAAIATQRDPGNSYSWSHPVDSYINYSXGXEKVVQRLEYVVARKNLLHLKESAKVDMSSWRTPSTSLVVSSHIFGRDNDKEEIIKLLLDDGCHAESPVTVIPIVGLGGIGKTTLAQLVYNDAKVVKNFDLKVWVCVAENFDPVNLTRIILKKITSCSCDTDDFESLQTDLKDKLVRKRFLVVLDDVWDDRGDIWEDILKPFQYGNKGSKILLTTRSEKVASMFTAIKQHYRLGLLSDQDCWSVFLKHSSLSINSEQHATLEPIGRKIVEKCKGLPLAVKTLGGLLRHKYDVGDWENILESKIWKLPENDSKIIPALRVSYHYLPSHLKRCFIYCSLFPEDYQFDKNELILLWMAEDLVLPNKNYTLENIGCTYFDELVARSFFQPSSIDVGVFVMHDLMHDLATFFAGKFYFRVTEFGDLQKIYNKTRHLSYMVNPNDPVIRLGEVYKGAIHMRTFLAVHLLHLYESIDITSDSRHLQLLELRCLRALSFKSFSIESLPDSIDKLIHLHYLDLSYTPIVELSESLCKLHNLQTLKLTYCVHLKMLPSRMQDLVNLRHLDIEETPSLIEMPKGMSKLKHLNFLSGYILGKKEENGIRELGSLDNLHGSLCISNLKNVNNSREALEAKMANKKHINVLELKWIPDNDDDDDDVDFQKERSILELLQPHRNLRELSIDGYRGEIFPDWLGLSCYSNLTDLSMHRCKNCRQLPSLGQVPSLQHLYITGLEGLERIGGEFYNNAESSHQGTPFRSLQTLRFTHMPRWREWHIPHDFDGFPKLKSLSIVNCPVLSGDLPAHLPALEKLNIVNSDELACSLPRAPKLHQLLVMGPWYEPDEYAYEHLSKPHEVVILETLLTKSVLECLPHIEWSCVQRLTIENPWPALSFSGDYLPDSLQYLQITGCSDLTFSGPLHSKSLTEILVEECRSLTLLPLGALPNLKTLSISDCPEMDCFGEECLPRSLTTLEISRCQKLERWITWRGLQSEGLTRLILEGWKEVKSFPREGCLPASLQWKQEFQFMDVVRVECSKKFIDMIMQAFYENQSKDVVVSSVLFLMIQTLKYNMDFFAGMLKYNTTGTAIRSSFMVNHY* 1177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3199 1176 SUPERFAMILY L domain-like 484 899 - -
Amo12g3199 1176 Pfam Rx N-terminal domain 15 93 IPR041118 -
Amo12g3199 1176 PRINTS Disease resistance protein signature 190 205 - -
Amo12g3199 1176 PRINTS Disease resistance protein signature 263 277 - -
Amo12g3199 1176 PRINTS Disease resistance protein signature 640 656 - -
Amo12g3199 1176 PRINTS Disease resistance protein signature 361 375 - -
Amo12g3199 1176 SUPERFAMILY RNI-like 838 1082 - -
Amo12g3199 1176 Gene3D Ribonuclease Inhibitor 543 918 IPR032675 -
Amo12g3199 1176 Pfam NB-ARC domain 167 409 IPR002182 GO:0043531
Amo12g3199 1176 Coils Coil 71 91 - -
Amo12g3199 1176 Gene3D - 409 494 IPR036388 -
Amo12g3199 1176 Coils Coil 703 723 - -
Amo12g3199 1176 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 424 IPR027417 -
Amo12g3199 1176 Gene3D - 324 408 IPR042197 -
Amo12g3199 1176 Gene3D - 147 318 IPR027417 -
Amo12g3199 1176 PANTHER DISEASE RESISTANCE PROTEIN RP 36 995 IPR044974 GO:0006952
Amo12g3199 1176 Gene3D Ribonuclease Inhibitor 948 1105 IPR032675 -
Amo12g3199 1176 Gene3D - 16 118 - -
Amo12g3199 1176 PANTHER OS05G0414200 PROTEIN 36 995 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3199 Amo-Chr12 120741628 120746459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g3199 188 493 WRKY Transcription Factor Family AT5G45050 25.155 4.65e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g3199 - - ahf:112709990 1291.56