Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3196 ATGCACGGCAGAGAGAAGCGGTGTTTGGATTCGGCTTCAGCTGACGAAGGACAACCTGATCGGAAGCGACCTGCTTTGGCTAGTGTAATTGTTGAAGCTCTGAAGGTTGACAGTCTGCAGAAGCTTTGTTCATCACTGGAGCCTATTCTTCGCAGAGTTGTTAGTGAAGAAGTTGAGCGTGCTTTGGCAAAACTAGGCCCTGCCAAGCTTACTGGAAGGTCTTCTCCAAAGCGCATTGAAGGCCGAGATGGCAAAAATTTACAGTTGCACTTCAAAACTAGGTTATCCCTTCCTCTCTTTACTGGTGGAAAAGTGGAGGGCGAGCAAGGGTCTGCCGCCATACATATTGTTTTAATTGATGCAAACACAGGCCAGATTGTCACATCAGGCCCAGAGTCATGTGCCAAACTAGATGTTATTGTGCTTGAAGGTGATTTCAATAATGAGGATGATGATAATTGGACTGAAGAAGACTTTGAGAGTCATGTTGTGAAAGAGAGGGAAGGAAAAAGGCCTCTTCTTGCTGGCGATCTGCAAGTTACACTGAAGGATGGTATAGGAACACTGGGTGAGCTCTCATTTACAGATAATTCTAGCTGGATAAGAAGTAGGAAATTCAGGCTGGGGCTGAAAGTTGCCTCCGGTTGCTGCGAGAGGATGCGTATTCGTGAAGCCAAAACTGAAGCTTTCACTGTTAAGGATCATCGTGGAGAATTATACAAGAAACACTACCCTCCCGCCTTGACTGATGAGGTATGGAGACTGGAGAAGATTGGCAAGGATGGTTCCTTTCACAAAAGGCTAAATAAAGCTGGAATATACACCGTTGAAGACTTCCTAAGACTTGTGGTCAGGGACCCTCAGAGATTACGCAATATTCTTGGGAGTGGCATGTCAAATAAGATGTGGGATATTCTTGTTGAGCATGCAAAGACTTGTGTTCTCAGTGGAAATCTTTATGTATACTATCCTGACGAAGCAAGAAATGTGGGTGTTGTTTTCAATAACATCTATGAGCTAAGTGGCTTAATTGCCAATGACCAATATTATCCAGCTGATTCTCTTTCGGAGAGCCAAAAGGTCTATGTTGACACATTGGTGAAGAGGGCATACGAAAATTGGATGCATGTTATTGAGTATGACGGGAAGTCTCTGCTAAATTACAACCATAATAAGAGTTTGGACACATCTCATCCTCAAGCTCAAATAAGCTCTCATGAATATTCAAACTCCTTCCAACAGATTTCAGTCCCAAGTTTACCAGTTCCAGTAAACACAGGGCAGCCTTCAGTGGATTCAGGAGTAACAGTTGGAGGTTATCATGACGGCACAGCTACCAGATTTCCGATACATACACAAAATGTTAATTCTTGTGTTCAATTTGATAATAATGCATGCCCGCTACAAAATCAGTTGAATGCTTCACACCAAGATCAGCTTCATAGAGATGACAGTATGGTGACACATGGTCTGTTACAATCAGCCACTCATGGCTTTCAGGCTGCCAGCAGTTCAAATCCTAGTAGAGGAATTGAGGAATTGTTCCCAGAGGAAGAGATTCGTATTAGAAGTCATGAGATGCTGGAAAATGAAGATATGCAGCATCTGCTCCGTATCTTTAATATGGGAGGCCAAACTCATGGTTCCCTTAATGCCCATGAAGATGGTTTTTCATATTCATCTGCATACATGGCCGCAAACCCAATGAGCTACAATTGTGATGATGAGCGAGGCTGTTCTTCTGGAAAAGCTGTTGTTGGCTGGCTCAAGCTTAAGGCAGCTTTGAGATGGGGCATTTTTGTTAGGAAGAAGGCTGCTGAGAGACGGGCACAGCTTGTTGAGTTGGATGACTCATAG 1857 0.4373 MHGREKRCLDSASADEGQPDRKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPAKLTGRSSPKRIEGRDGKNLQLHFKTRLSLPLFTGGKVEGEQGSAAIHIVLIDANTGQIVTSGPESCAKLDVIVLEGDFNNEDDDNWTEEDFESHVVKEREGKRPLLAGDLQVTLKDGIGTLGELSFTDNSSWIRSRKFRLGLKVASGCCERMRIREAKTEAFTVKDHRGELYKKHYPPALTDEVWRLEKIGKDGSFHKRLNKAGIYTVEDFLRLVVRDPQRLRNILGSGMSNKMWDILVEHAKTCVLSGNLYVYYPDEARNVGVVFNNIYELSGLIANDQYYPADSLSESQKVYVDTLVKRAYENWMHVIEYDGKSLLNYNHNKSLDTSHPQAQISSHEYSNSFQQISVPSLPVPVNTGQPSVDSGVTVGGYHDGTATRFPIHTQNVNSCVQFDNNACPLQNQLNASHQDQLHRDDSMVTHGLLQSATHGFQAASSSNPSRGIEELFPEEEIRIRSHEMLENEDMQHLLRIFNMGGQTHGSLNAHEDGFSYSSAYMAANPMSYNCDDERGCSSGKAVVGWLKLKAALRWGIFVRKKAAERRAQLVELDDS* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3196 618 PANTHER OS02G0177800 PROTEIN 3 616 IPR012416 GO:0005516
Amo12g3196 618 MobiDBLite consensus disorder prediction 1 22 - -
Amo12g3196 618 Pfam Calmodulin binding protein-like N-terminal domain 87 235 IPR046831 -
Amo12g3196 618 Pfam Calmodulin binding protein C-terminal domain 319 380 IPR046829 -
Amo12g3196 618 Pfam Calmodulin binding protein central domain 248 313 IPR046830 -
Amo12g3196 618 PANTHER CALMODULIN-BINDING PROTEIN 3 616 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3196 Amo-Chr12 120686703 120692088 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g3196 4 613 Calmodulin-binding Proteins AT5G57580 62.208 0.0 757
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g3196 - - gmx:100812605 1028.85