Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3180 ATGGCTGCCGAACTTGTGGGTGGAGCTGTTCTGTCTTCTATTCTTAATGTTGTTTTTGACAGGATGTCCTCACCAGAAGTTGCCAACTGGATCAAAGGGAAGAAGCTTACCCAGAAGCTGCTTGAAAGGTTGAAGACTACTCTTTATGCTGTTCAAGCCTTTCTCAYHGATGCTGAGCAGAAGCAGATCAAGGAGAGAGCTGTCAAGGACTGGCTCGATASTCTCAAAGATGCTATGTATSTTGCKGATRACTTGYYGGATGAAGTCTTCACCAAAGCTGCCACTCARAAGGATCCAGGTACCTTCTTCTCTCGTTWTCTCAATTTGCAAGATAGGGAGATAGCAAACWGSATGGAGGAAATTATTGATARGATAGAATCTATTGTGAAACAAAAAGACACTCTTGGTCTTAGAGAGATTCCTAAGGAGAACATGTCATGGAGGATTACAACATCTCTAGTTGAAAGATCCAATATATATGGCAGGGAAAAAGACAAGGAGGTCATAGTGAAATTGTTGTTGGACGACGCTGATACTACTGATGGTGATATACCTGTGATTCCCATTGTGGGCATGGGAGGAATAGGAAAGACTACTTTGGCCCAATTGGTKTACCATGATGACGAAGTGAAGAAGAATTTTGATTTTCAAGCTTGGGTYTGTGTGTCCGAAGAGTTTGATGTTATCAAGGTCACCAAGACTATAATTGAAACAATAACTTCACGATCTTGTAAGTTGACAGATTTGAATTTACTTCAACATGATTTAAAGGAAAAGCTGGCAAGACGAAAATTCTTTGTTGTCTTGGATGATTCATGGAATGAAGATTATGACGCTTGGAATAGCCTTCTAAAACCTTTTCAGAATGGAGTTAAGGGAAGTAAAATTCTCATAACTACTAGAAGTAAAAAGGTGGCTTCTGTAGTGCAAACTGTTCCACCTCATGAACTAAGTTTATTGTCTCATGAAGATTGTTGGTTAGTGTTTTCAAAGCATGCACGTCTTTCCACTGACTCTATGCAGAATACAACTTTAGGAAAGGTTGGCAGAAATATTGTAAAGAAGTGTAATGGATTGCCATTGGCAGCTCAAGCCCTTGGAAGCTTATTGCGTGGGAATTCTGATGTCAAGTACTGGAATCATATATTGAAGAGTGAGATATGGGAATTCTCTGATGACAGGATAAAAGTTGTACCGGCATTAAGAATTAGCTACTATTATCTTCCTTCATGCTTGAAAGAGTGCTTTGTTTATTGTTCCTTGTATCCCAAAGACCATGAATTCGACAAAGATGAATTGATTTTGTTATGGATGGCAGAAAATTTTTTACAACCAGTAGGAAAAAAAAGTATGGAAGAAGTTGGCGATGAATATTTTGATGAATTAGTTGCGAGATCATTTTTCCAGCCTCATAGTACTCGGGAAAAGATATTTGTGATGCATGATCTGGTGCATGATTTGGCAATGATCTTTGGTGGAGACTTCTATTTTAGAGCTGAGGAGGTTGAGAATACTGTTGAAGTTGATATTAAAACTCGTCATTTGTCACATAATGCTAAAGGCAATTACCCAATGTCAAAACTTCTGGGAGTTTGTGACAAAGTAAAACATACAAGGACATTTCTTGAAGTTAATTTGGATTGGGGGATTCCATTCAACATGGAAAACGCACCATGCATTTTACTCTCACAATTGAAGTACTTGAGAGTTTTGTCTTTTAAATGCTTCCCTCTTGACTCACTTCCTGATTCAATAGGTGAGTTGATTCATTTGCGTTACTTGGATCTATCCAAGACCTACGTTGTGACATTGCCTGAGTCACTGGGTAACCTGTACAATTTGCAGACTTTGAAGCTGAATGGATGTTCAAATCTGAAAATTCTTCCAGCTGGAATGCAAAATCTTGTCAATTTGCGTCACCTTGATATTACAGGGACTTGTTTGCATGAGATGCCGAAAGGCATGAGCAAATTGAAAGGTTTGCAGTTTTTAAGCGACTACATTGTTGGGAAGCATGAAGAGAACAAGATCAAAGAACTGGGAGCACTTGCAAATCTACACCAATCACTTTCCATTACCAAATTGGAGAATGTGGTCAACAGCAATGAAGCTTCGGAGGCAAGAATGTGTGATAAGGATGGCATTAACTCTTTGAGCTTGTGGTGGTCAGTAGATAAAGATGAGAACACAGTAGATTCCCAAATTGAAAGAGATATACTTGACAAGTTACGACCTCACAGTAATTTGAAAGAACTACAAATCAGGGGTTACAGGGGTACAACGCTTCCAGATTGGTTGGGGCATTCTTCCTACCACAACATCACCAAGGTACTTATGGGCGGTTTCCTTTCGGGTGGTTTCAGAAATTGTTGTATGCTTCCTTCACTTGGAGAGTTGCCCTCTTTGAAGCACCTAAAAATTAAAGGCTTTGAAAGGCTTGGGATTGTTGGTGCTGAATTTTACCAAAACCATGATTCTTGTGTGGAGACACCATTTCCAATGCTTGAAACACTCTGGTTTGAATCAATGCCTTGCTGGAAGGAGTGGCGTTCATTAGAGTTCAATGCATTTCCCAGACTTAGGAAGCTTACCATATGGGGGTGTCCCATGTTGACAGGAGATTTGCCCAATCATCTACCATCTTTGAAATATCTTGATATTCGGAATTGCGAGCAGCTGAGTTCTTGCCTTCCAAGAGCTCCTGCTATTACCAAATTGTGTCTACTTCATAGCAATAATGTGAGAATTCTAGAGCTACCTCCTTTATTGCATGAACTATTAATCAAAGGAAAGAATCTAGTGGAGGCCGTCGTGCCGGCCATAAAGAACACCCAACTAAGTTGCCTCACATCTTTATCCATCTCAGATTGTTCCTCCCATATATTGTTTCCATTGAGTAGTATTCCTGCATCAGTGAAAAAGTTGAGGATATCAAGTTGTAGAAACTTAGAATTCCAAATTGAAGGCCAACACGACTCGCTGCATATACTTGAAATAAATGGAGTCTGTTGTGGTGTCATGCTCTCTTTCATGTCTCCGTTCATTATATATATATACAACTGTGCCAGATTGAAATCCATTTCCACGCTGTGGACAGCAGCACCTCAGCTAGAGAATCTCACAATAATGGGCTGTCCAGAAATCGATTTGTTTGCTATAAGGGATCCACACTGTAGCTTGAGATCTCTTCGCATCGGCTACTTCGAGAAGCTAGTGAGCAGTGCAGCATTGATGAATTTGCAATTTCACGGGCTTACTCATCTTACCATTGAAGGTGAATGCGAAAGTGTGAGTGTGAAGTCTCTCCCAAAGGAAGGTTGGTTGCCTGCATGCCTTGAGTCTCTGATACTGAATAGCATTAAAAGTGTGGAGACTTTGGAATGCAAGGGACTAGTCCACCTCAACTCCCTCCGAAATTTAACCATTATTGAATGTCCCAAGCTGGAGAATATTGAGGGAGAAAAGCTACCTGCTTCTCTAATTCGACTCATCATCAAAGAAAGCCATTTGCTTGGTAAGAGGTGTGAGATGAAGGACCTACAAGTTTGGCCTAAAATTTCCCACATCCGCGGCATTCAAGTTAATGGAAGATGGATTTGGACAGCATACAGCTGCATGAAGAATATTCAATTATTCGAATATGCAGAGTGGTCCAAAATCTTAAAGAGGATGGATACTGGCATAAAGCATGCTAACATTGTCAAGGTTAGAGTCAAGTTTCTGGATGATCAGAACCGCCACATCATGAGGAATGTGAAGGGACCAGTGAGAGAAGCACTTGTGGGTGGAGCAGTTCTATCTTCCATTCTGAATGTTGTTTTTGATGCTGAGCAAAAGCAGATCAAGGAGAGAGCTGTGAAGGACTGGCTCGATAGTCTCAAAGATGCTATGTATGTTGCTGATGACTTGTTGGATGAAGTCTTCACCAAAGCTGCCACTCAGAAGGATCCAGGTACCTTCTTCTCTCGTTATCTCAGTTTGCAAGATAGGGAGATAGCAAACAGGGTGGAGGAAATCACTGATAGGATAGAGTCTATTGTGAAGCAAAAAGACACTCTTGGTCTCAGAGAAATTCCTAAGGAGAACATGTCATGGAGGATTAAAACATCTCTAGTTGATAGATCTAATGTATATGGCAGGGAAGATGACAAGGCGGCCATAGTGAACTTGTTGTTGGATGATGATGATGACACTGGTGATGCTGATATATCTGTGATTTCCATTGTGGGCATAGGTGGAATAGGAAAGACTACTTTAGCCCAATTGGTTTACCACCATGATAAAGTGAAGGAGAATTTTGATTTTAGAGGTTGGGTTTGTGTGTCAGAAGGGTTTGATGTCATGAAGGTCACCAAGAATATACTTGATGCAATAACAAGGAGTCCTTGTAACTTGAAAATTTTGAATTTACTCCTACAAGATTTACAGGAAAAGTTGTCAGGGCAAAGATTCTTTATCGTCTTGGATGATGTATGGAACGAGGATTATTACGATTTGAATAGGCTTCTAAAACCTTTTCAACATGAGGTTAAGGGAAGTAAAATTCTCATAACTACTAGAAGTAAAAAGGTGGCTTCTGTGGTGCAAACTGTTTCACCTCATGAACTAAATTTATTGTCTGATGAAGATTGTTGGTTAGTGTTTTCAAAACATGCATTTCTTTTCACCGACTCTGTTCAGACTCCAACTTTGGAAAAGGTCGGTAGAAAGATTGTAAAGAAGTGTAACGGATTATCTTTGGCAGCTCAATCTCTTGGAGTTGGTGGTAATAAAGTGAGAATTGGGGAGCTACCTCCTTTACTGCGTCAACTATCAATTAAAGGAAAGCATCAAGTAGAGTTCGTGGTGGAGGCCATTGCGAACATGCAACTGACTTGA 4878 0.4012 MAAELVGGAVLSSILNVVFDRMSSPEVANWIKGKKLTQKLLERLKTTLYAVQAFLXDAEQKQIKERAVKDWLDXLKDAMYXADXLXDEVFTKAATQKDPGTFFSRXLNLQDREIANXMEEIIDXIESIVKQKDTLGLREIPKENMSWRITTSLVERSNIYGREKDKEVIVKLLLDDADTTDGDIPVIPIVGMGGIGKTTLAQLVYHDDEVKKNFDFQAWVCVSEEFDVIKVTKTIIETITSRSCKLTDLNLLQHDLKEKLARRKFFVVLDDSWNEDYDAWNSLLKPFQNGVKGSKILITTRSKKVASVVQTVPPHELSLLSHEDCWLVFSKHARLSTDSMQNTTLGKVGRNIVKKCNGLPLAAQALGSLLRGNSDVKYWNHILKSEIWEFSDDRIKVVPALRISYYYLPSCLKECFVYCSLYPKDHEFDKDELILLWMAENFLQPVGKKSMEEVGDEYFDELVARSFFQPHSTREKIFVMHDLVHDLAMIFGGDFYFRAEEVENTVEVDIKTRHLSHNAKGNYPMSKLLGVCDKVKHTRTFLEVNLDWGIPFNMENAPCILLSQLKYLRVLSFKCFPLDSLPDSIGELIHLRYLDLSKTYVVTLPESLGNLYNLQTLKLNGCSNLKILPAGMQNLVNLRHLDITGTCLHEMPKGMSKLKGLQFLSDYIVGKHEENKIKELGALANLHQSLSITKLENVVNSNEASEARMCDKDGINSLSLWWSVDKDENTVDSQIERDILDKLRPHSNLKELQIRGYRGTTLPDWLGHSSYHNITKVLMGGFLSGGFRNCCMLPSLGELPSLKHLKIKGFERLGIVGAEFYQNHDSCVETPFPMLETLWFESMPCWKEWRSLEFNAFPRLRKLTIWGCPMLTGDLPNHLPSLKYLDIRNCEQLSSCLPRAPAITKLCLLHSNNVRILELPPLLHELLIKGKNLVEAVVPAIKNTQLSCLTSLSISDCSSHILFPLSSIPASVKKLRISSCRNLEFQIEGQHDSLHILEINGVCCGVMLSFMSPFIIYIYNCARLKSISTLWTAAPQLENLTIMGCPEIDLFAIRDPHCSLRSLRIGYFEKLVSSAALMNLQFHGLTHLTIEGECESVSVKSLPKEGWLPACLESLILNSIKSVETLECKGLVHLNSLRNLTIIECPKLENIEGEKLPASLIRLIIKESHLLGKRCEMKDLQVWPKISHIRGIQVNGRWIWTAYSCMKNIQLFEYAEWSKILKRMDTGIKHANIVKVRVKFLDDQNRHIMRNVKGPVREALVGGAVLSSILNVVFDAEQKQIKERAVKDWLDSLKDAMYVADDLLDEVFTKAATQKDPGTFFSRYLSLQDREIANRVEEITDRIESIVKQKDTLGLREIPKENMSWRIKTSLVDRSNVYGREDDKAAIVNLLLDDDDDTGDADISVISIVGIGGIGKTTLAQLVYHHDKVKENFDFRGWVCVSEGFDVMKVTKNILDAITRSPCNLKILNLLLQDLQEKLSGQRFFIVLDDVWNEDYYDLNRLLKPFQHEVKGSKILITTRSKKVASVVQTVSPHELNLLSDEDCWLVFSKHAFLFTDSVQTPTLEKVGRKIVKKCNGLSLAAQSLGVGGNKVRIGELPPLLRQLSIKGKHQVEFVVEAIANMQLT* 1626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3180 1625 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1365 1587 IPR027417 -
Amo12g3180 1625 Gene3D Ribonuclease Inhibitor 552 933 IPR032675 -
Amo12g3180 1625 Gene3D - 26 134 - -
Amo12g3180 1625 Gene3D - 1263 1351 - -
Amo12g3180 1625 Gene3D - 1361 1532 IPR027417 -
Amo12g3180 1625 Gene3D - 143 312 IPR027417 -
Amo12g3180 1625 Pfam NB-ARC domain 1398 1586 IPR002182 GO:0043531
Amo12g3180 1625 Pfam NB-ARC domain 164 384 IPR002182 GO:0043531
Amo12g3180 1625 PRINTS Disease resistance protein signature 356 370 - -
Amo12g3180 1625 PRINTS Disease resistance protein signature 186 201 - -
Amo12g3180 1625 PRINTS Disease resistance protein signature 877 893 - -
Amo12g3180 1625 PRINTS Disease resistance protein signature 259 273 - -
Amo12g3180 1625 PANTHER DISEASE RESISTANCE PROTEIN RP 32 958 IPR044974 GO:0006952
Amo12g3180 1625 PANTHER DISEASE RESISTANCE PROTEIN RP 1277 1586 IPR044974 GO:0006952
Amo12g3180 1625 Gene3D - 1208 1261 IPR012340 -
Amo12g3180 1625 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 419 IPR027417 -
Amo12g3180 1625 Pfam Ribosomal protein S28e 1214 1258 IPR000289 GO:0003735|GO:0005840|GO:0006412
Amo12g3180 1625 SUPERFAMILY L domain-like 479 923 - -
Amo12g3180 1625 SUPERFAMILY RNI-like 832 1166 - -
Amo12g3180 1625 PANTHER OS05G0414200 PROTEIN 32 958 - -
Amo12g3180 1625 PANTHER OS05G0414200 PROTEIN 1277 1586 - -
Amo12g3180 1625 Pfam Rx N-terminal domain 1266 1317 IPR041118 -
Amo12g3180 1625 Pfam Rx N-terminal domain 10 99 IPR041118 -
Amo12g3180 1625 Gene3D - 1538 1587 IPR042197 -
Amo12g3180 1625 Gene3D - 319 403 IPR042197 -
Amo12g3180 1625 Gene3D - 404 489 IPR036388 -
Amo12g3180 1625 Gene3D Ribonuclease Inhibitor 1013 1154 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3180 Amo-Chr12 120519785 120528478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g3180 183 645 WRKY Transcription Factor Family AT5G45050 22.836 4.37e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g3180 - - adu:107472405 1525.38