Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3169 ATGAATTTCGTGAAGTCAAAAAGAAAAATCAAAATGCGATTTCCGCTCTCACACTCACTCCGTTTAGCTTCTTCCCTCTTTACCAAGCCAAACAAGTTTCAATTCCACCACTTCACCACCACCACCGCCACGCCGGAACTACGACCCGACCCGCCCCCTATTCGAGTCGGCCTCACAGACTCGGCGGGGCGCGGTGTCTTCGCCACTCGTCCGATCGGCGCCGGAGAACTCATCCACACCGCCAAGCCCGCCGTATGCCACCCTTCTCCCAACGTTCTCCACACTGTCTGTTACTGCTGCCTCCGCAGAATCTCTAATCCCGATGACTCCGAAGCTCAACGCGTGTCGTTTTGCAGCGAAGATTGTAAACGACGCTGCATGGAATTTTACAATGTTGAGACGAAAGCAGATTGGGCGGCTTTTGATGACTATTGCGGGACCCATGGTTTGAAATATCCTTTCATGGTGAAGCGGTTGGCTTGCATGGTCATATCAGGAGTTGCCAGAAGTGACAGTGTAGACATACTTCAACCTGCCAATTTGACACCTCAGATGATTTCACGGATGGAAGAAGAGTTTGGCTTGTTATGGAATGCTTTCAGAAAGACACTTATTTCAGATGAAGATATTTCTTTTTTAACCAAGCAATGGTACATTGGTGTTTTGGCACGAATTCGAATCAATGCATTTCGCATTGAGTTGGCTACAGGACTATATGAAGATCTTCTTTCATCAGCAGCAGCATCTGTAGAAGCTGAAGCTGCCGTTGGACATGCTGTCTACATACTTCCGTCCTTCTACAATCATGATTGTGATCCAAATGCGCACATTATATGGATAGATAACGCAGATGCAAAATTGAAGGCCCTTCGTGATGTTGAAGAAGGTGAAGAACTTAGAATCTGCTACATTGATGCCAGCCTGGATCGCGATGCTCGGCAAGAACTTTTATCTCGGGGATTTGGTTTTCAATGCAACTGTAACAGGTGCTTACATGGAGATTAA 1005 0.4697 MNFVKSKRKIKMRFPLSHSLRLASSLFTKPNKFQFHHFTTTTATPELRPDPPPIRVGLTDSAGRGVFATRPIGAGELIHTAKPAVCHPSPNVLHTVCYCCLRRISNPDDSEAQRVSFCSEDCKRRCMEFYNVETKADWAAFDDYCGTHGLKYPFMVKRLACMVISGVARSDSVDILQPANLTPQMISRMEEEFGLLWNAFRKTLISDEDISFLTKQWYIGVLARIRINAFRIELATGLYEDLLSSAAASVEAEAAVGHAVYILPSFYNHDCDPNAHIIWIDNADAKLKALRDVEEGEELRICYIDASLDRDARQELLSRGFGFQCNCNRCLHGD* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3169 334 Pfam SET domain 63 303 IPR001214 GO:0005515
Amo12g3169 334 Gene3D - 96 147 - -
Amo12g3169 334 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD3 59 331 - -
Amo12g3169 334 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 59 331 - -
Amo12g3169 334 SMART set_7 52 310 IPR001214 GO:0005515
Amo12g3169 334 ProSiteProfiles SET domain profile. 52 304 IPR001214 GO:0005515
Amo12g3169 334 SUPERFAMILY SET domain 49 330 IPR046341 -
Amo12g3169 334 Gene3D SET domain 65 330 IPR046341 -
Amo12g3169 334 Gene3D - 148 229 - -
Amo12g3169 334 CDD SET_SMYD 257 330 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Amo12g3169 SET 7.9e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g3169 - - adu:107475991 650.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g3169 12 120434546 120438084 Amo12g3169 12 120434546 120438084 ECH