Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3158 TGCAAACTATACACAACTTCTCTCACTCTTTCTTACTTTCTTGCTCTTGTGAACATGGCTGCTGAACTTGTTGGAGGAGCTTTTCTCTCTTCTTTTCTCAATGTTCTTTTTGACAAGCTGTCTGATCCTGCCATAATCAATATGATGCTAGGAAAGAAGGTTGACCAGAAGCTGCTTCAAAGGCTGAAGACCATTCTGAATGTGGTTGAAGCTGTGCTGAATGATGCTGAGAAGAAGCAGATCACTGACCCTGCTGTCAAGAGGTGGCTCGAAGATCTCCAAGATGCTGTCTATGATGCTGATGACTTGTTGGATGAAGTCGCCACCAAAGCTGCGACTCAGAAGGATCCACCAGGTAACTTCCTGTCTCGCTTTCTCAATTTGCAAGATAGGGAGATGGTTACTAGGATTGAAGACATCATTGCTAGACTAGACGATATTGCAAAACACAAAGATATCCTTCGTCTAGAAAAGATTGTAGCCAAGAACATGTCTGGGAGAATCGAATCAACATCTCTTGTTCAAAAGTCTGATGTATTTGTTGGTAGGGACCAAGACAGGGAGGATATAGTCAAATTGTTGTTAGATGATACTAATGATGGTGAACTATCTGTCATCCCTATCTGGGGTATGGGTGGGATCGGAAAAACTACTTTGGCTAAGTTGGTTTTTCATGATGACAAAGTGCAGCAAAAGTTTAATGTTAGAGCATGGGTTTGTGTTGGGGAAGAATTTGATGTTCTTAAAGTGACAAAGACTGTAATAGAGGAAATAACTTCTAGTCGCTGTGATATGAATAGCTTAAACTCAGCTCAACAACATTTAAGGAGTAAGCTAACAGGGATGAAATTCTTGGTTGTTTTGGATGACTTTTGGAGTAACAATTACACAGCTTGGGCAAATTTTCTGATTCCTTTTAGATGTGGAAGTGAGGGGAGTAAGATCCTTGTGACAACTCGTAGCGAAAAGATTGCAAACATGGTGAAAGGTTTTCATTATCAAGCCTACAATTTGAGTGCGTTGAATGATGAAGATTGTTGGGTAGTGTTTGCAAATCATGCATTTCTTTCTGGAGAGCGTCTAGCTTTTGAAAAAGTTGCCAGAGAAATTGTTAAAAAGTGCAAGGGATTACCTCTAGCTGCTCAAGCACTTGGGAGCTTATTAAGGTCCAAAGATAATGAAAAGGATTGGAATAATGTTTTGAACAGTGAAATTTGGGAATTCTCTGAAGAGGAAATTGAAATTATTCCTGCTTTGAGGATCAGTTATTACCACCTTCCTTCGCACTTAAAACGTTGTTTTGTTTATTGTTCTTTGTATCCCAAAGACTATGAATTTGATAGAGATGAATTGGTGTTATTGTGGATGGCCGAGGGTCTTTTGCAACAGCCGAGGGGGGGAAGCACTTTAGAAGAAGTTGGCTATGAATATTTTAGTGATTTAGCATCAAGATCATTTTTTCAACCTTCTTATGAAACTTCATTTGTAATGCACGATCTGGTGCATGATTTAGCAACATTCTATGGTGAAAAGTTCTATTTTAGAACCTTTGAAGTCAAGAATGTACTCAAGCATGATATCAAAACTCGTCATTTGTCATATGTTTTGCACAAGAAGGATTCAGTCTCAAAGATCCTGGAAGTATGTGATAGTTTAAAGCATGCAAGGACATTGCTGCAAGTCAATTTGGATACATATCATGAATTCTCAGAGGGAGTAGTAGTTCCTTGTGACTTACTAGAACAATTGAAGTGCTTACGAGTTTTGTCATTTAAAATTTTTTCAGATGATGAAAACTTGTTGCATCGTTCAATTGGTGAATTGATCCATTTGCGTTATTTGGATCTTTCAGACACATCCATCGTGACTTTGCCCGAGTCTTTAAGTTGCTTGTACAATTTACAAACCTTGAAGTTGAGAGAGTGTAGAAATCTTAAAAAGCTTCCTAGCAAGATGCAAAATCTTGTGAATTTGCGTCATCTTGATATTTTCGGCTCTATTTTGGTGGAAGAGATGCCAAAAAAGATGAGCAAATTAAAAGATTTGCAATTTTTAAGTCACTATATTGTGGGGAAACATGAAGAGAATGGGATTGGAGAACTGGGAGGACTAACACATCTTCATAGGTCATTGTGGATTACGCAACTAGAGAATGTTAAGAATAGTGGTGAAGCATCGAATGCAAGGATGGATGAAAAAATACACCTGAATGGTTTATTTTTGAGTTGGTCATCGTTTGAAGAAAGTGAGGTTTGTGATTCCCACACTGAAAAAGATGTACTTGACAAATTACGTCCTCACAAAGACTTGAAGACGCTATTCATCAGGTGTTACAGAGGTACGATGTTTCCGGATTGGGTAGGGCAGTCTTGGTACCACAACATGACTTGGTTGGAGCTGAGTGGATGCAGGAATTGTTGGGTGATTCCTTCACTTGGACAGTTACCCTCTCTGCAGAGTCTAATCATTAGAGAGCTCGACAAGGTGAAGAAGATTGGTGGGTCATTCTATAAGGGTGATGGAACTCATCAGCATCAGGAGACACCCTTCCGATCCCTTAAAATTCTCATTATTCAAAGAATGCCTTGCTGGGAGGAATGGGAGTCATATGAATGTGATGATGATGATGATGCACCATTTCCGAAACTTGAAGCACTTTGGATACTGCACTGTCCTAAGTTAAGAGGAGATTTGCCCACTTTCCTTCCCTCTTTGGAGAAGCTTCGGATTGAAGAATGTGAGGAGATTGGTTGTTATCTGCCAAGAGCTCCCATCCTACGCTCATTAACAATAGATGGCAAACAAGAAGCAAGAATGCGGGAGCTACCACTTTCCATGTTGGAGGTACTATGGGTTAATGGAGAGCAGCAGGTGGAGTATGTGTTTGAGGCCATGACCCACACCCAACCAACCTCTCTCAGTTGTTTAGGAATCTCAGAGTGCTCAACAGCCATATCATTTCCAGGGGATTCTTTGCCCCCTTCATTGAAAGAGCTATCAATCAAGGATTGCAAGAATGTAGAATTCCCAATGCAACACCAACAACATCACTCACTAACCTACTTTTGCACCATGCCTTGTCCTACACCCAAATGGAAGGCCTTTCATTACCTTTCTTCCTGTTGCTCCTGCTTGCTTGCRCGTGCCCTTTGTTGGATTTGCAAGAAACAAATTGAAGTGAAGTTGGAGTAG 3192 0.4019 CKLYTTSLTLSYFLALVNMAAELVGGAFLSSFLNVLFDKLSDPAIINMMLGKKVDQKLLQRLKTILNVVEAVLNDAEKKQITDPAVKRWLEDLQDAVYDADDLLDEVATKAATQKDPPGNFLSRFLNLQDREMVTRIEDIIARLDDIAKHKDILRLEKIVAKNMSGRIESTSLVQKSDVFVGRDQDREDIVKLLLDDTNDGELSVIPIWGMGGIGKTTLAKLVFHDDKVQQKFNVRAWVCVGEEFDVLKVTKTVIEEITSSRCDMNSLNSAQQHLRSKLTGMKFLVVLDDFWSNNYTAWANFLIPFRCGSEGSKILVTTRSEKIANMVKGFHYQAYNLSALNDEDCWVVFANHAFLSGERLAFEKVAREIVKKCKGLPLAAQALGSLLRSKDNEKDWNNVLNSEIWEFSEEEIEIIPALRISYYHLPSHLKRCFVYCSLYPKDYEFDRDELVLLWMAEGLLQQPRGGSTLEEVGYEYFSDLASRSFFQPSYETSFVMHDLVHDLATFYGEKFYFRTFEVKNVLKHDIKTRHLSYVLHKKDSVSKILEVCDSLKHARTLLQVNLDTYHEFSEGVVVPCDLLEQLKCLRVLSFKIFSDDENLLHRSIGELIHLRYLDLSDTSIVTLPESLSCLYNLQTLKLRECRNLKKLPSKMQNLVNLRHLDIFGSILVEEMPKKMSKLKDLQFLSHYIVGKHEENGIGELGGLTHLHRSLWITQLENVKNSGEASNARMDEKIHLNGLFLSWSSFEESEVCDSHTEKDVLDKLRPHKDLKTLFIRCYRGTMFPDWVGQSWYHNMTWLELSGCRNCWVIPSLGQLPSLQSLIIRELDKVKKIGGSFYKGDGTHQHQETPFRSLKILIIQRMPCWEEWESYECDDDDDAPFPKLEALWILHCPKLRGDLPTFLPSLEKLRIEECEEIGCYLPRAPILRSLTIDGKQEARMRELPLSMLEVLWVNGEQQVEYVFEAMTHTQPTSLSCLGISECSTAISFPGDSLPPSLKELSIKDCKNVEFPMQHQQHHSLTYFCTMPCPTPKWKAFHYLSSCCSCLLARALCWICKKQIEVKLE* 1064
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3158 1063 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 169 437 IPR027417 -
Amo12g3158 1063 PRINTS Disease resistance protein signature 629 645 - -
Amo12g3158 1063 PRINTS Disease resistance protein signature 374 388 - -
Amo12g3158 1063 PRINTS Disease resistance protein signature 278 292 - -
Amo12g3158 1063 PRINTS Disease resistance protein signature 205 220 - -
Amo12g3158 1063 Gene3D Ribonuclease Inhibitor 872 1046 IPR032675 -
Amo12g3158 1063 CDD RX-CC_like 59 149 IPR038005 -
Amo12g3158 1063 PANTHER DISEASE RESISTANCE PROTEIN RP 37 986 IPR044974 GO:0006952
Amo12g3158 1063 Pfam NB-ARC domain 187 406 IPR002182 GO:0043531
Amo12g3158 1063 PANTHER OS05G0414200 PROTEIN 37 986 - -
Amo12g3158 1063 Gene3D - 422 506 IPR036388 -
Amo12g3158 1063 Gene3D - 340 421 IPR042197 -
Amo12g3158 1063 Coils Coil 59 79 - -
Amo12g3158 1063 Gene3D - 158 331 IPR027417 -
Amo12g3158 1063 SUPERFAMILY L domain-like 496 1034 - -
Amo12g3158 1063 Gene3D Ribonuclease Inhibitor 538 866 IPR032675 -
Amo12g3158 1063 Gene3D - 33 150 - -
Amo12g3158 1063 Pfam Rx N-terminal domain 28 120 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3158 Amo-Chr12 120293571 120297592 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g3158 180 400 WRKY Transcription Factor Family AT4G12020 27.572 2.91e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g3158 - - adu:107475988 1791.93