Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3157 ATGGCTTTCAAGAAATTCTCCATTCTTATCAATCTTTTTGTATCCCATTTTCTTCCCTTCTTTTTGTTAATGACATCTTTGTCCTTAGCAGATGACCATGAATCCATTTGCCAATCAACAATAGACCCTTCTTATTGCAAAAACATGCTTGCAAATCAAAATGGCAACATATTTGARTATGGCCGTTTCTCATTCCAAAAATCAATATCCCAAACCCAAAAATTCCTAAACCAAGTTAACTCATATCTCCAAAATACACACACTTTGTCACAATACACAATTGGGGCACTCCAAGATTGCACCTTTCTTTCTCAACAAAGCTTAGAGTATTTATCAAACACCTTCACCACAATCAATCAAACTAGTAATAATACTAATAATAATCTTCTTCCATCTTCACAAGCTGAAGATTTTCAAACATTTCTTAGTGGGGTTTTGACCAACCAACAAACTTGCTTAGARGGTTTATCATTACAAACCTCTACTTCTAATTCGGATCAAGATTTGAAGAATGAACTATCTTCATCATTATCCAATGACACAAAACTCCATAGTGTTTCCCTTGCTTTATTCACAAAAGCTTGGGTACCAAGCAAGAAAATCATAACATCATGGCCAAACAACAAGCACAACTTCAATTTCCATCATGGAAATCTACCACTGAAGATGTCCAAAAAAGCTCAAGAAATTTATGATCATGCTAGGAATTCCAAGCATGGGAGGAAATTGCTCCAAAATAATGCGAACAACGGCAGCAGCAGCGGCGACGATCAGAGTGTTTTGGTGAGTGATATTGTGGTTGTGAGCCAAGATGGGAGTGGAAACTTTACAAGCATAAATGATGCCATTGGTGCAGCACCAAATAATAGTGTTGCTAGTGATGGATACTTCTTTATCTTTGTAACTGAAGGTGTGTATGAAGAGTATGTTTCCATTGATAAGACCAAGAAGTACCTTATGATGGTTGGTGAAGGAATTAACCGCACAATCATTACTGGTAGTCACAATGTTGTTGATAATTTCACAACATTCAATTCCGCAACATTTGCTGTGGTAGGTCAAGGGTTTGTAGCGGTAAACATAACATTCCGCAACACTGCTGGACCAAGCAAGAACCAAGCAGTTGCTTTAAGAAGTGGTTCAGATTTGTCTACCTTTTATAGTTGCAGTTTTGAAGGATACCAAGACACGCTTTATACGCATTCTCTTAGACAATTTTATAGAGAGTGTGATATTTATGGTACAGTTGATTTCATATTTGGTAACGCTGCTGTGGTGTTTCAAGATTGTAACATCTATCCTCGCCTTCCAAACAAAGGACAGTTCAATACTATCACTGCACAAGGCAGAACCGATCCAAATCAAAACACAGGAACTTCGATTCAGAATGCAACCGTAAAACCTGCCGATGATTTAGCACCAAATGTTGGTAGTGTTCAAACATACCTTGGTAGGCCATGGAAGAATTATTCAGTGACAGTGTTCATGGAATCATTCATGGATGGTTTCATAAACTCTGCAGGTTGGCATGAATGGAGTGGTGATTTTGCGCTTAGTACATTGTACTATGCTGAATTCAACAACACTGGGAATGGTTCTGACACTTCTAACCGTGTTACATGGCCTGGTTATCATGTCATTAATGCTACCGATGCAGCTAATTTTACGGTTTCTAATTTCTTGAGTGGAGATAATTGGATTCCTCAAACTGGTGTTCCATATTTGAGTGGATTAAATTAA 1740 0.377 MAFKKFSILINLFVSHFLPFFLLMTSLSLADDHESICQSTIDPSYCKNMLANQNGNIFEYGRFSFQKSISQTQKFLNQVNSYLQNTHTLSQYTIGALQDCTFLSQQSLEYLSNTFTTINQTSNNTNNNLLPSSQAEDFQTFLSGVLTNQQTCLEGLSLQTSTSNSDQDLKNELSSSLSNDTKLHSVSLALFTKAWVPSKKIITSWPNNKHNFNFHHGNLPLKMSKKAQEIYDHARNSKHGRKLLQNNANNGSSSGDDQSVLVSDIVVVSQDGSGNFTSINDAIGAAPNNSVASDGYFFIFVTEGVYEEYVSIDKTKKYLMMVGEGINRTIITGSHNVVDNFTTFNSATFAVVGQGFVAVNITFRNTAGPSKNQAVALRSGSDLSTFYSCSFEGYQDTLYTHSLRQFYRECDIYGTVDFIFGNAAVVFQDCNIYPRLPNKGQFNTITAQGRTDPNQNTGTSIQNATVKPADDLAPNVGSVQTYLGRPWKNYSVTVFMESFMDGFINSAGWHEWSGDFALSTLYYAEFNNTGNGSDTSNRVTWPGYHVINATDAANFTVSNFLSGDNWIPQTGVPYLSGLN* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3157 579 CDD PMEI-like_3 35 195 - -
Amo12g3157 579 Gene3D Invertase/pectin methylesterase inhibitor family protein 31 194 IPR035513 -
Amo12g3157 579 SUPERFAMILY Pectin lyase-like 262 577 IPR011050 -
Amo12g3157 579 Pfam Plant invertase/pectin methylesterase inhibitor 34 190 IPR006501 GO:0004857
Amo12g3157 579 Pfam Pectinesterase 266 564 IPR000070 GO:0030599|GO:0042545
Amo12g3157 579 Gene3D - 263 579 IPR012334 -
Amo12g3157 579 SMART PMEI_2 28 190 IPR006501 GO:0004857
Amo12g3157 579 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 193 IPR035513 -
Amo12g3157 579 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 23 577 - -
Amo12g3157 579 ProSitePatterns Pectinesterase signature 2. 412 421 IPR033131 -
Amo12g3157 579 PANTHER PECTINESTERASE 23 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3157 Amo-Chr12 120285682 120288808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g3157 12 578 Carbohydrate Esterase AT1G02810 57.069 0.0 663
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g3157 K01051 - gmx:100813051 803.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g3157 12 120285682 120288808 Amo12g3157 12 120285682 120288808 ECH