Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3153 ATGGGTACTATCAATTTTCAAGCAAAACCCATATCCCGAAATCTAATATTTCTCACAACCTTGATCTTGATCTTCATCTCAACCCCATCATTATCCTCTAATGAAGAAAACACAACCACCTTAACTGCTTATGATGTTCTTCAAAAATTCAACTTCCCAATTGGGCTTCTCCCAAACGGTGTTCTAAGCTACGAATTAGACCCTTCCACGGGTAACTTCAAAGCTTACTTAGATGGCACTTGCACGTTCAAGATTGAGTCCTATGATTTGAACTATAAGTCAACCATAACAGGTGTCATCACCAAGAACAAGATCTCTAACTTAAGTGGTATTCAGGTTAAGGTTTTGTTCCTTTGGTTGAACATTGTGTCGGTGACACGTGTTGATGATGAGTTACAATTCTCGGTTGGGATTGCATCTGCTGATTTTGCGGTTAGTAATTTCTATGAGTCTCCCACTTGTGGTTGTGGATTTGATTGTGTAAATTTGGCTAATAAGGTCATTAATCATGGGAACATGTCATCACATGATTATTACTTCATCTTCCATATCAACATGGTGAAAGGGACTAAGTTTCATTTCATACTGAACAAAAACCCTTCCATCCCAAAAAAAAAAAACACCGCCATGGCTCCGATCACCGCCATTTTTCTCTTCCTCCTCCTCTCTCCGCTGCTCACCACTTCCTCCGTCGCCGGAGAACCTACCGCATACGAGGCTCTCGCGAGCTACGATTTCCCCTCGGGAATTCTCCCTGAAGGCATAACCGGCTACGAACTCGACGAATCCACGGGCAAATTCCGCGCGTTCCTCAACGGAACCTGCAGCTTCTCTCTGGAAGGTTCCTACGAGCTTAGCTACAAATCAACGATCAGTGGCATTATCTCGAAAGACAAGCTAACGGAGCTCAACGGCGTCTCCGTTAAGGTCCTCTTCTTCTGGCTTAACATCGTCGAGGTTGTGCGTAACGGCGACGAGCTCGATTTCTCCGTTGGAATCGCCTCCGCTTCGTTCCCGCTCGATAACTTCTTCGTGTCGCCAAGGTGCGGTTGCGGATTGAACTGCGACGACGACGACGATTTCCGAGTGAGGAAGCTTAAGTTGAGGAATCCATCGGTTTCGTCATCGTAG 1131 0.4545 MGTINFQAKPISRNLIFLTTLILIFISTPSLSSNEENTTTLTAYDVLQKFNFPIGLLPNGVLSYELDPSTGNFKAYLDGTCTFKIESYDLNYKSTITGVITKNKISNLSGIQVKVLFLWLNIVSVTRVDDELQFSVGIASADFAVSNFYESPTCGCGFDCVNLANKVINHGNMSSHDYYFIFHINMVKGTKFHFILNKNPSIPKKKNTAMAPITAIFLFLLLSPLLTTSSVAGEPTAYEALASYDFPSGILPEGITGYELDESTGKFRAFLNGTCSFSLEGSYELSYKSTISGIISKDKLTELNGVSVKVLFFWLNIVEVVRNGDELDFSVGIASASFPLDNFFVSPRCGCGLNCDDDDDFRVRKLKLRNPSVSSS* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3153 376 PANTHER F22D16.19 PROTEIN 212 375 - -
Amo12g3153 376 PANTHER F22D16.19 PROTEIN 16 171 - -
Amo12g3153 376 SUPERFAMILY At5g01610-like 17 160 IPR036758 -
Amo12g3153 376 PANTHER T31J12.3 PROTEIN-RELATED 16 171 IPR007493 -
Amo12g3153 376 PANTHER T31J12.3 PROTEIN-RELATED 212 375 IPR007493 -
Amo12g3153 376 Pfam Protein of unknown function, DUF538 43 148 IPR007493 -
Amo12g3153 376 Pfam Protein of unknown function, DUF538 237 343 IPR007493 -
Amo12g3153 376 Gene3D - 27 152 IPR036758 -
Amo12g3153 376 Gene3D - 224 350 IPR036758 -
Amo12g3153 376 SUPERFAMILY At5g01610-like 206 355 IPR036758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3153 Amo-Chr12 120185869 120189433 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g3153 - - adu:107475976 331.257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g2222 16 86342909 86349411 Amo12g3153 12 120185869 120189433 PCT
Amo12g3153 12 120185869 120189433 Amo16g2222 16 86342909 86349411 PCT