Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3151 ATGTCTAAGCTTCTCAATCTCATCATTCTCTTTCTATTGCCTTTCTTCTTTGCTTCCATAGCTTCTTCAGACACACCTCCTTCAACTCCAATCACCCCAACCAATCTATGCAAATCCACACCCGATCCAAACTACTGCAAATCCGTTCTCCCTCCAACAAAAAACGCCAATGTCTATTACTATGGCCGCTTCTCAGTTAAAAGCTCCATTTCACAAGCCACAAAGTTCTTGAGCCTTGTCAACAAGTATCTTCAACGGAGCAACACGCTTTCTGTCCCCGCGATTCGAGCACTTCAAGATTGCAAGACACTGGGAGAACTGAACCTGGATTTCTTGACGAGCTCGTTTCAAACGGTGAACAAGACGACGAGGGTGTTGGGGAGTTACCAGGCTGATGATATCCAGAACCTTCTTAGTGCCATTCTTACGAACCAACAAACATGCTTGGATGGACTTCAAGAAGCTTCTTCAGCTTGGAGCGTCAAGAATGGACTCAGTGTTCCACTTTCTAATGACACTAAGCTTTATAGTGTCTCTCTTGCTCTCTTCACTAAAGGGTGGGTTCCAAAGACAAAGAACAAAGTTGGAACATCATCAGTTCAAGTGACTAGGAAGCAACTTGGATTCAAAAATGGTCGCATGCCTCCAATGCAGATGTCGAGCCAAACCCGAGCAATCTACGAGTCGGTGAGCCGCCGGAACCTTCTAGAACCGGTGGTGGGGACCCAGGTGAAGGTGAACGGCATTGTAACCGTTAGCCAAGACGGCACAGGAAACTTCACCACCATCAATGATGCCTTAGCGGTTGCACCCAACAAGTCGTCGTCCACGGACGGGTACTTCTTGATCTATGTTACTGCCGGGATTTACGACGAAATCGTGTCCATTGATAAAAAGAAGACTTATTTGATGATGATTGGAGATGGAATCAACAAAACAATCATTACAGGAAATCAAAGTGTCGTTGATGGCTGGACAACCTTTAATTCCGCCACTTTTGCCGTGGTAGGCCAAGGATTTGTGGGAGTGAACTTCACCGTCCGGAACACCGCCGGCGCCGTGAAACACCAAGCAGTGGCACTCCGAAACGGCGCCGATCTATCCACATTCTATAGTTGCAGCTTTGAGGGGTACCAAGACACACTCTATGCACATTCTTTAAGACAATTCTATAGAGAATGTGACATATATGGTACCGTTGACTTTATCTTTGGTAACGCCGCATCCGTGTTCCAAAATTGTAACATATACCCTAGACTCCCAATGAGTGGACAATTCAATGCAATTACCGCCCAAGGCCGAACCGATCCAAACCAAAACACCGGAATCTCAATCCATAATTGCACAATCAAGCCGAGTGATGACTTGGCCGCGAACATTGGCGCGGCCGCGACCTACCTTGGTAGGCCGTGGAAACAATACTCTAGGACGGTTTACATGCAAACTTTCATAGACAGTGTGGTTGATTCTAAAGGATGGAAAGAATGGGATGGTGATTTTGCATTGAGTACATTGTATTATGCCGAGTATGATAACAATGGACCCGGTTCTAACACTTCCAACAGAGTCACTTGGGCTGGTTACCATGTGATTAATTCCACGGATGCATCAAATTTCACTGTCTCTAATTTCTTGCTTGGAGATGATTGGTTGCCCCAGACAGGTGTCACTTACACTAGTAGCTTGATATAG 1692 0.4592 MSKLLNLIILFLLPFFFASIASSDTPPSTPITPTNLCKSTPDPNYCKSVLPPTKNANVYYYGRFSVKSSISQATKFLSLVNKYLQRSNTLSVPAIRALQDCKTLGELNLDFLTSSFQTVNKTTRVLGSYQADDIQNLLSAILTNQQTCLDGLQEASSAWSVKNGLSVPLSNDTKLYSVSLALFTKGWVPKTKNKVGTSSVQVTRKQLGFKNGRMPPMQMSSQTRAIYESVSRRNLLEPVVGTQVKVNGIVTVSQDGTGNFTTINDALAVAPNKSSSTDGYFLIYVTAGIYDEIVSIDKKKTYLMMIGDGINKTIITGNQSVVDGWTTFNSATFAVVGQGFVGVNFTVRNTAGAVKHQAVALRNGADLSTFYSCSFEGYQDTLYAHSLRQFYRECDIYGTVDFIFGNAASVFQNCNIYPRLPMSGQFNAITAQGRTDPNQNTGISIHNCTIKPSDDLAANIGAAATYLGRPWKQYSRTVYMQTFIDSVVDSKGWKEWDGDFALSTLYYAEYDNNGPGSNTSNRVTWAGYHVINSTDASNFTVSNFLLGDDWLPQTGVTYTSSLI* 564
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3151 563 Gene3D - 248 563 IPR012334 -
Amo12g3151 563 Pfam Pectinesterase 250 548 IPR000070 GO:0030599|GO:0042545
Amo12g3151 563 ProSitePatterns Pectinesterase signature 2. 396 405 IPR033131 -
Amo12g3151 563 TIGRFAM PME_inhib: pectinesterase inhibitor domain 4 184 IPR006501 GO:0004857
Amo12g3151 563 PANTHER PECTINESTERASE 23 561 - -
Amo12g3151 563 SUPERFAMILY Pectin lyase-like 247 559 IPR011050 -
Amo12g3151 563 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 185 IPR035513 -
Amo12g3151 563 SMART PMEI_2 28 182 IPR006501 GO:0004857
Amo12g3151 563 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 7-RELATED 23 561 - -
Amo12g3151 563 CDD PMEI-like_3 36 187 - -
Amo12g3151 563 Pfam Plant invertase/pectin methylesterase inhibitor 35 182 IPR006501 GO:0004857
Amo12g3151 563 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 185 IPR035513 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Amo12g3151 Amo-Chr12 120156567 120159542 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g3151 1 563 Carbohydrate Esterase AT4G02330 62.045 0.0 713