Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3150 ATGGCTTTCAAGAAATTCTCCATTCTTATCAATCTTTTTGTATCCAATTTTCTTTCCTTCTTGTTAATGACATCTTTGTCCTTAGCAGATGACCATGAATCCATTTGCCAATCAACAATAGACCCTTCTTATTGCAAAAACATGCTTGCAAATCAAAATGGCAACATATTTGATTATGGCCGTTTCTCATTCCAAAAATCAATATCCCAAACCCAAAAATTCCTAAACCAAGTTAACTCATATCTCCAAAATACACACACTTTGTCACAATCCACAATTTGGGCACTCCAAGATTGCACCTTTCTTTCTCAACAAAGCTTAGAGTATTTATCAAACACCTTCACCACAATCAATCAAACTAGTAATAATAATAATAATCTTCTTCCATCTTCACAAGCTGAAGATTTTCAAACATTTCTTAGTGGGGTTTTGACCAACCAACAAACTTGCTTAGACGGTTTATCATTACAAACCTCTACTTCTAATTCGGATCAAGATTTGAAGAATGAACTATCTTCATCATTATCCAATGACACAAAACTCCATAGTGTTTCCCTTGCTTTATTCACAAAAGCTTGGGTACCAAGCAAGAAAATCATAACATCATGGCCAAACAACAAGCACAACTTCAATTTCCATCATGGAAATCTACCACTGAAGATGTCCAAAAAAGCTCAAGAAATTTATGATCATGCTAGGAATTCCAAGCATGGGAGGAAATTGCTCCAAAATAATGCGAACAACGGCAGCAGCAGCGGCGACGATCAGAGTGTTTTGGTGAGTGATATTGTGGTTGTGAGCCAAGATGGGAGTGGAAACTTTACAAGCATAAATGATGCCATTGGTGCAGCACCAAATAATAGTGTTGCTAGTGATGGATACTTCTTTATCTTTGTAACTGAAGGTGTGTATGAAGAGTATGTTTCCATTGATAAGACCAAGAAGTACCTTATGATGGTTGGTGAAGGAATTAACCGCACAATCATTACTGGTAGTCACAATGTTGTTGATAATTTCACAACATTCAATTCCGCAACATTTGCTGTGGTAGGTCAAGGGTTTGTAGCGGTAAACATAACATTCCGCAACACTGCTGGACCAAGCAAGAACCAAGCAGTTGCTTTAAGAAGTGGTTCAGATTTGTCTACCTTTTATAGTTGCAGTTTTGAAGGATACCAAGACACGCTTTATACGCATTCTCTTAGACAATTTTATAGAGAGTGTGATATTTATGGTACAGTTGATTTCATATTTGGTAACGCTGCTGTGGTGTTTCAAGATTGTAACATCTATCCTCGCCTTCCAAACAAAGGACAGTTCAATACTATCACTGCACAAGGCAGAACCGATCCAAATCAAAACACAGGAACTTCGATTCAGAATGCAACCGTAAAACCTGCCGATGATTTAGCACCAAATGTTGGTAGTGTTCAAACATACCTTGGTAGGCCATGGAAGAATTATTCAGTGACAGTGTTCATGGAATCATTCATGGATGGTTTCATAAACTCTGCAGGTTGGCATGAATGGAGTGGTGATTTTGCGCTTAGTACATTGTACTATGCTGAATTCAACAACACTGGGAATGGTTCTGACACTTCTAACCGTGTTACATGGCCTGGTTATCATGTCATTAATGCTACCGATGCAGCTAATTTTACGGTTTCTAATTTCTTGAGTGGAGATAATTGGATTCCTCAAACTGGTGTTCCATATTTGAGTGGATTAAATTAA 1734 0.3772 MAFKKFSILINLFVSNFLSFLLMTSLSLADDHESICQSTIDPSYCKNMLANQNGNIFDYGRFSFQKSISQTQKFLNQVNSYLQNTHTLSQSTIWALQDCTFLSQQSLEYLSNTFTTINQTSNNNNNLLPSSQAEDFQTFLSGVLTNQQTCLDGLSLQTSTSNSDQDLKNELSSSLSNDTKLHSVSLALFTKAWVPSKKIITSWPNNKHNFNFHHGNLPLKMSKKAQEIYDHARNSKHGRKLLQNNANNGSSSGDDQSVLVSDIVVVSQDGSGNFTSINDAIGAAPNNSVASDGYFFIFVTEGVYEEYVSIDKTKKYLMMVGEGINRTIITGSHNVVDNFTTFNSATFAVVGQGFVAVNITFRNTAGPSKNQAVALRSGSDLSTFYSCSFEGYQDTLYTHSLRQFYRECDIYGTVDFIFGNAAVVFQDCNIYPRLPNKGQFNTITAQGRTDPNQNTGTSIQNATVKPADDLAPNVGSVQTYLGRPWKNYSVTVFMESFMDGFINSAGWHEWSGDFALSTLYYAEFNNTGNGSDTSNRVTWPGYHVINATDAANFTVSNFLSGDNWIPQTGVPYLSGLN* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3150 577 SUPERFAMILY Pectin lyase-like 260 575 IPR011050 -
Amo12g3150 577 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 22 575 - -
Amo12g3150 577 CDD PMEI-like_3 34 193 - -
Amo12g3150 577 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 192 IPR035513 -
Amo12g3150 577 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 34 191 IPR035513 -
Amo12g3150 577 Pfam Pectinesterase 264 562 IPR000070 GO:0030599|GO:0042545
Amo12g3150 577 ProSitePatterns Pectinesterase signature 2. 410 419 IPR033131 -
Amo12g3150 577 Pfam Plant invertase/pectin methylesterase inhibitor 33 188 IPR006501 GO:0004857
Amo12g3150 577 Gene3D - 261 577 IPR012334 -
Amo12g3150 577 PANTHER PECTINESTERASE 22 575 - -
Amo12g3150 577 SMART PMEI_2 27 188 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3150 Amo-Chr12 120141098 120144162 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g3150 1 576 Carbohydrate Esterase AT4G02330 56.463 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g3150 K01051 - gmx:100813051 796.964