Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3136 ATGGCTGCAAGATTTGTGGGAGAAGCTTTTCTCAACTCTGCACTTGGCACTATCTACGACATGCTGATTTCACCCTTAATTGTCAACCTCATCCAGAGAAAGAAGCTTAACCGGAAACTGGTTGAGAAGCTGGAGACAGTTCTGAAGGCTGCTCATGCTGTGATCAATGACGCCGAGCGGAGGCAGATCGAGGAGGAGGCTGTGAAGCACTGGCTGGACAGGCTGAAGGATGTTGTGTACGATGCTGAAGACATACTTGATGAAGTCACCACCAAAGCTGCCATTCAAAAGGTTCAAGGTAACTCTCTGTCTCGCAATGTCAATTTGCATGGTGATGATGAGATAGTAACCAAGATAGAAGACATCATTGCTGCATTAGAGTCAATTGTAAATGAGAAAGATGGTCTTGGCTTGAAGGAGATACCGGTGGAGGACATGTCATGGAGGATCCCCTCAACATCTCTGGTTGGTGTGCATCAAATATATGGCAGGGACCAAGACAGGGAGGCCATAGTAAAACTGTTGTTAGATGTTACCAATGACGGTGGAATATCCGTGATTCCTATGGTCGGCATGGGTGGAATAGGAAAGACTACTTTGGCTCAGATGGTTTACAATGATGACCGAGTGAAACAAAAATTTGATGTTAAGGCATGGGTTTGTGATGGGCAAGAAGAATTTGACGTTCTTAAGGTGACAAAGGCTGTGATGGAAGCAACTTCTAGTTCTTGCAACTCAACTGAGTTGAACAAAATTCAGGAGAGTTTGAAGGAAGTCCTAGCAGGGAAGAAGTTGTTGGTTGTTTTGGACGACATGTGGAGTAACAATTATGATGCCTGGATAAGTTTTCTAAAGCCTTTTAAATCTAGTAACGGGGGTGTTAAGATTCTTGTAACAACCCGTCTTGATTCGATTGCTGATATGGTGAAAACTATTCCAGCTTACCATTTGAGTTTGTTGGGTGATGATCACTGCTGGTCAGTGTTTGCAGATCACGCATGTCTTAATTCTGCTGAACCTCATATCCGTTCTGGTTTAGAAGTAGTTGGTCGAAAAATTGTCAAAAAGTGTAATGGGTTAGCTTTGGCTGCTCAAACACTTGGAGGTTTATTAAGAGCAAGAAAAGAAGCAGCGGATTGGGAGTTTATATTGAGGAGTGAAATTTGGGAATTTCCCAAAAAAGATAGTGGGATTCTTCCTGCATTGAGAATAAGTTATCACTACCTCCCTTCATACTTAAAACGTTGCTTTGTATATTGTTCTTTATTCCCAAAAGACTATGAATTCGAAAGAGATGAACTGGTGTTACTGTGGATGGCAGAAGGTCTTTTGCAGCAACCAAATAGTAGTGGAGGTACTTTAGAAGAAGTCGGTTATAAATATTTTAACGATTTGGTTTCGAGATCATTTCTCCAACATTCTGAAACCGATGAAAATTCATTCGTGATGCACGATCTCATGCATGATTTAGCAATATTCTATGGTGGAAAGTTCTTTTGTAGAACCTTAGAACTCAAAACCGCAGACAAGCATGAGGCTTATCCTCGTCATCTTTCTTATAGTCTTAACATCCGTGATTCGCTCTCAAAGTTCTTGGAAGCATGTGATAATTTACAAGATACAAGGACATTGTTGAAAATCAATGCTGGTATCAGGCATGATTCCTCAAAGAAAATCGATCCTTGTCGCTTACTTGCACAATTGAAGCACGTAAGGGTTCTGTCATTTGAATTCTTTCCTCGTGACCATAATTCGTTGCCCGATTCAATAGGTGATTTGATCCATTTGCGTTATTTGGATCTCTCTGATTCACCTATCGTGACATTGCCAGAGTCAATGTGCAAATGTTATAATTTACAAACACTGAAGTTGAGTGATTGTGAAAGACTAGAAAAGCTTCCAAGCAACATGCAGGATCTTGTAAATTTGCTTCATTTGGATCTCTCTTGTACGGCAATTGAGGTATTGCCCGAGTCATTGAGCAAATTGCATAATTTACAAACGTTGAAGTTGAGAGAGTGTGAAAACCTGAAAAAGCTTCCAAGCAAGATGCAAGATCTTATAAATTTGCACCATCTCGATATTGAAGGTACTAAAATAGAAGAGATGCCGAAAGGGATGAGCAAATTAAAAGACCTGCAGATTTTATGTTACTATATTGCCGGCAAGCATGAAGAGAATGGGATAGGGGAATTGGGAGGACTTGTAAATCTTCAAGGGTTATTTCGTCTTAAGAAATTAGAGAATGTGGTTGATAGCAGTGAAGCTTGGAAGGCAAGGATGGTTGATAAGAAATACATCAGTGATCTACGTTTGAAGTGGTCATCAGGTGAAGATAGTGATATTGTTGATTCCCAAATCGAAAAAGATGTGCTTAGCAAATTAGAACCTCACAATGACCTTAAATATCTAACAATAAAGGGTTACAGGGGTACAGTGTTTCCGGATTGGGTAGGGCAGTCTAGGTACCACAACATGACTGAGTTGGAGCTGAATGGATGCAGGAATTGTTTGGTGTTTCCTTCCCTTGGACAGTTACCCTCTCTGGAGACGCTGCTCATTGCAGGGTTTGACAAGGTGAAGATGATTGGTGGCTCATTCTATAAGGCTGATGCAACTCATCAGCATCAGGAGACACCCTTCCGATCCCTTAAATATCTCTCATTCTATCAAATGAGTTGCTGGGAGGAATGGGAGTCATATGAATGTGATGATGATGATGATGCACCATTTCCGAAACTTGAGGAATTCTATATATCGCAGTGTCCTAAGTTAAGAGGAGATTTGCCCACTTTCCTTCCGTCTTTGAAAAAACTTGTCATATCAGGATGCGAGGAGCTTGGTTGTTATGTGCCAAGAGCTCCCATCCTACGCTCATTAAGAATATCTGGCAAACAGGAAGCAAGAACGCGGGACCTACCACTTTCCATGTTGGAGACACTAGTAATTAATGGAGAGCAGCTTGTGAATTCTCTGTTTGAGGCCATGACCCACACCCAACCAACCTCTCTCATAGAGCTACACATCTCAGAGTGCTCATCAGCCATATCATTTCCAGGGGATTCTTTGCCCCCTTCATTGGAAGTGCTATTAATCAACGATTGCAAGAATGTAGAATTCCCAATGCAACACCAACAACATGAGTCACTAATTAGTCTTACAATAAACAACAGCTGTGATTCGCTTACATCCTTCGCATTCCCAGCGTTCCCAAATCTCAAGTATCTCACAATCGCAAGTCGTGAAAATTTGACATCTCTGGAGGTGTCACAGTCACAGTCCCTCAAAGAATTATGGATTGAAAAATGTCCTAAGCTGGAGAACATAACAAGGCTGCCTGCCTCTTTACGGGAGCTCAAGATCTATAGATGTCAGTTGTTGGGTGAAGGCATAGAGAGGAAGGACCCCCACATTTGGCCATCCATTTCCCACATCACCTACATTAAAGTTGATAGTAATCTGATTGACAAAGACTCAACATCTTAA 3486 0.4148 MAARFVGEAFLNSALGTIYDMLISPLIVNLIQRKKLNRKLVEKLETVLKAAHAVINDAERRQIEEEAVKHWLDRLKDVVYDAEDILDEVTTKAAIQKVQGNSLSRNVNLHGDDEIVTKIEDIIAALESIVNEKDGLGLKEIPVEDMSWRIPSTSLVGVHQIYGRDQDREAIVKLLLDVTNDGGISVIPMVGMGGIGKTTLAQMVYNDDRVKQKFDVKAWVCDGQEEFDVLKVTKAVMEATSSSCNSTELNKIQESLKEVLAGKKLLVVLDDMWSNNYDAWISFLKPFKSSNGGVKILVTTRLDSIADMVKTIPAYHLSLLGDDHCWSVFADHACLNSAEPHIRSGLEVVGRKIVKKCNGLALAAQTLGGLLRARKEAADWEFILRSEIWEFPKKDSGILPALRISYHYLPSYLKRCFVYCSLFPKDYEFERDELVLLWMAEGLLQQPNSSGGTLEEVGYKYFNDLVSRSFLQHSETDENSFVMHDLMHDLAIFYGGKFFCRTLELKTADKHEAYPRHLSYSLNIRDSLSKFLEACDNLQDTRTLLKINAGIRHDSSKKIDPCRLLAQLKHVRVLSFEFFPRDHNSLPDSIGDLIHLRYLDLSDSPIVTLPESMCKCYNLQTLKLSDCERLEKLPSNMQDLVNLLHLDLSCTAIEVLPESLSKLHNLQTLKLRECENLKKLPSKMQDLINLHHLDIEGTKIEEMPKGMSKLKDLQILCYYIAGKHEENGIGELGGLVNLQGLFRLKKLENVVDSSEAWKARMVDKKYISDLRLKWSSGEDSDIVDSQIEKDVLSKLEPHNDLKYLTIKGYRGTVFPDWVGQSRYHNMTELELNGCRNCLVFPSLGQLPSLETLLIAGFDKVKMIGGSFYKADATHQHQETPFRSLKYLSFYQMSCWEEWESYECDDDDDAPFPKLEEFYISQCPKLRGDLPTFLPSLKKLVISGCEELGCYVPRAPILRSLRISGKQEARTRDLPLSMLETLVINGEQLVNSLFEAMTHTQPTSLIELHISECSSAISFPGDSLPPSLEVLLINDCKNVEFPMQHQQHESLISLTINNSCDSLTSFAFPAFPNLKYLTIASRENLTSLEVSQSQSLKELWIEKCPKLENITRLPASLRELKIYRCQLLGEGIERKDPHIWPSISHITYIKVDSNLIDKDSTS* 1162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3136 1161 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 420 IPR027417 -
Amo12g3136 1161 SMART LRR_typ_2 593 616 IPR003591 -
Amo12g3136 1161 SMART LRR_typ_2 640 663 IPR003591 -
Amo12g3136 1161 SMART LRR_typ_2 687 710 IPR003591 -
Amo12g3136 1161 Coils Coil 41 61 - -
Amo12g3136 1161 Pfam NB-ARC domain 166 384 IPR002182 GO:0043531
Amo12g3136 1161 Gene3D Ribonuclease Inhibitor 954 1135 IPR032675 -
Amo12g3136 1161 SUPERFAMILY L domain-like 482 957 - -
Amo12g3136 1161 Pfam Rx N-terminal domain 11 102 IPR041118 -
Amo12g3136 1161 PANTHER DISEASE RESISTANCE PROTEIN RP 31 648 IPR044974 GO:0006952
Amo12g3136 1161 Gene3D - 147 313 IPR027417 -
Amo12g3136 1161 CDD RX-CC_like 7 129 IPR038005 -
Amo12g3136 1161 PANTHER OS05G0414200 PROTEIN 31 648 - -
Amo12g3136 1161 PANTHER OS05G0414200 PROTEIN 651 1017 - -
Amo12g3136 1161 PRINTS Disease resistance protein signature 661 677 - -
Amo12g3136 1161 PRINTS Disease resistance protein signature 259 273 - -
Amo12g3136 1161 PRINTS Disease resistance protein signature 186 201 - -
Amo12g3136 1161 PRINTS Disease resistance protein signature 357 371 - -
Amo12g3136 1161 Gene3D - 405 492 IPR036388 -
Amo12g3136 1161 Gene3D Ribonuclease Inhibitor 515 953 IPR032675 -
Amo12g3136 1161 PANTHER DISEASE RESISTANCE PROTEIN RP 651 1017 IPR044974 GO:0006952
Amo12g3136 1161 SUPERFAMILY L domain-like 911 1148 - -
Amo12g3136 1161 Gene3D - 320 404 IPR042197 -
Amo12g3136 1161 Gene3D - 14 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3136 Amo-Chr12 119926521 119930533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g3136 184 758 WRKY Transcription Factor Family AT5G45050 24.065 7.67e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g3136 - - aip:107626171 1801.56