LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo12g3132	ATGGCTGCTGAACTTGTTGGAGGAGCTTTCCTCTCTTCTTTTCTCAATGTCCTTTTCGACAGGCTGTCTGATCCTGATTTCATCAACATGATGAGAGGAAAGAAGGTTGACCAGAAGCTGCTTCAAAGGTTGAAGACCATTCTGAATGTGGTTGAAGCTGTGCTGAATGATGCTGAGAAGAAACAGATCACTGACCCTGCTGTCAAGAGATGGCTCGAAGATCTCCAAGATGCTGTGTATGATGCTGATGACTTGTTGGATGAAGTCGCCACCAAAGCTGCCACTCAGAAGGATCCACCAGGTAACTTCCTGTCTCGCTTTCTCAATTCGCAAGATAGGGAGATGGTTAGTAGGATTGAAGAAATCATTGCTAGACTAGAAGATATTGCAAAACACAAAGATATCCTTCGGCTAGAAAAGATTGCAGCCAAGAACATGTCTGGGAGGATTCCATCAACCTCGCTGGTTAAAAAATCTGATATATTTGTTGGAAGGGACAAAGAAAGGGATGCCATAGTGAATTTGCTTTTAGATGATGCTTACAATGGTGAACTGTCCGTGATTCCCATCGTGGGCATGGGTGGGATAGGAAAAACTACTTTGGCTAAATTGGTTTATAATGATGACACAGTGCAACAAAAGTTTCATGTGAAGGCATGGGTTTGTGTTGGTGAGGAGGAATTTGATGTTCTGAAGGTCACAAAGGCGGTGATAGAGAAAACTTGCAGTGCTTGTTACTCAAATGATTTAGATACAGCTCAAAATCATTTGAAGAATGGGCTAACGGGGAAGAACTTCTTGGTTATTCTGGATGATGTCTGGAGCAGTAATCGTGAGCGTTGGGAAAGTTTTCTAACACCTTTTGAATGTGGAAGTGAGGGAGGCAAGATTCTTGTAACTACACGTCTTGATACAGTGGCTTCTGTGGTGAAAACTAAACATAATGAAGCTCACAATTTGAGTTTGTTGAATGAAGAACAATGCTGGTCAGTGTTTGCAAATCGTGCATGGGATCCTTCTGAATCTCGAGATTGTTCAACTTTAGAAGAAATTGGTAGAAAAATTGTTAAAAAATGTAAAGGGTTACCTTTGGCAGCTCAGGCCCTTGGAGGGTTATTGAGAGGGAAAGATAATGAAAAAGACTGGATTGATGTTTTGAATAGTGAATTCTGGGAACTCTCTGAGGAGGATAGTGGGATTCTTCCTGCATTGAGAATCAGTTATTACCACCTTCCTTCGTATTTAAAACGCTGCTTTGTTTATTGTTGTTTGTATCCGAAGGACTATGAATTTTATAGAGATGAATTGACATTATTGTGGATGGCAGAAGGTCTTTTGCTACAACCAAAGGGTGGAAACATTTTAAAAAATGTTGGTTATGAATATTTTGATGATTTGGTTTCAAGATCATTTTTTCAACGTTCCAACTCTGATGATAATACATTTGTGATGCACGACCTCATGCATGATTTAACAACATTTTATGGTGGAAAGTTCTTTTCTAGTATGCTTGAACACAAGACTGCAGCAAAGCATGATATGAAAACTCGCCACTTGTCATGTGCTCGCCGCAAGAATGATGATGATTCGCTTATGAAGATCATGGAAGCATGCAATAGGTTAAAACATGTGAGGACATTGATGCAAATCAATTTGCATAAAGGCGGCGTAATCCCAGAGGGAGATGGAGTAACCGTTCCTTGTGACTTACTAGAACAATTGAAGTGCTTACGAGTTTTGTCGTTTAATTTTTCTTCAGATGATGAAAACTTGATGCATAGTTCAATTGGCAAATTGATCCATTTGCGTTTTTTGGATCTTTCATTCACATCCATCGTGACTTTGCCCGAGTCTTTAAGTTGCTTGTACAATTTACAAACCTTGAAGTTGAGAGAGTGTAATAAACTTAAAAAGCTTCCTAGCAAGATGCAAAATCTTGTGAATTTGCGTCATCTTGATATTTCCGGCACTGATGATTTGGAAGAGATGCCAAAAAAGATGAGTGAATTAAAAGATTTGCAATTTTTAAGTTCCTATGTTGCGGGCAAACATGAAGAGAATGGGATTGGAGAATTGGGAGAGTTAGCACATCTTCATGGATCATTGAGTATTGAGAAATTAGAGAATGTTAAGAATAGTGGTGAAGCATCGAGTGCAAGAATGTATGAAAAAATACACCTGAATGCTTTAGATTTGAGTTGGACATCATTTGAAGAAAGTGAGGTTTGTGATTCCCAAACTGAAAAAGCTATTCTTGACAAATTATGTCCTCACAAAGACTTGAAGATGCTATTCATCTGGCGTTACAGAGGTACCATGTTTCCGGATTGGGTAGGGCAGTCTTCGTACCACAACATGACTGTGTTGATGCTGAGTGGATGCAGGAATTGTTGGATGGTTCCTTCACTTGGACAGTTACCCTCTCTGGAGAGGCTGATCATTGAAGAGTTCGAGAAGGTGAAGAAGATTGGTGGGTCATTCTATAAGGGTGATGGAACTCATCAGCATCAGGAGACACCCTTCCGATCCCTTAAATTTCTCATGATTCAAAGAATGCCTTGCTGGGAGGAATGGGAGTCATATGAATGTGATGATGATGATCATGCACCATTTCCGAAACTTGAAGAACTTTGGATAGAGGACTGTCCTAAGTTAAGAAGAGATTTGCCCACTTTCCTTCCGTCTTTGAAGCAACTCCGCATTCGAGGATGTGAGGAGCTTGGTTGTTATCTTCCAAGAGCTCCCATCTTACGCGAATTATTTATATTAGGCAAACAGAAAGCAAGAATGCGGGACCTACCACTTTCACTGCAAGTACTAGGAATCGGAGGAAAGCAGCTTGTGGAGGATGTGTTTGAGGCCATGACCCACACCCAACCAACCTCTCTCCGTTATTTAGAGATCTCAAATTGCTCATCAGCGGTGTCATTGCCAGGGGATGCTTTGCCCCCTTTGTTGAAACATTTGCGGATCAATAACTGCAAGAATGTAGAATTCCCAATGCAACACCAACAACATCACTCGCTAATGGAATTAAAAATAGACAACAGCTGTGATTCACTTACATCCTTCGCATTGCCAGCGTTCCCAAATCTCTGGTCTCTGACAATTGAAAGATGTGAAAATTTGACATCTCTGGAGGTGTCACAGTCACAGTCCCTCCGAGGATTATGGATTGAAGAATGCCCTAAGCTGGAGAACATAATAAGGCTGCCTGCCTCTTTATGGGAACTCAGAATCAGAGAATGTCCGTTGTTGGGTGAAGGCATAGAGAGGAAGGACCCCCACATTTGGCCATCCATTTCCCACATCCCCCGCATTCAACTTGATGGGAAATGGATTCGCAATGACTCAACATCTTAA	3363	0.4106	MAAELVGGAFLSSFLNVLFDRLSDPDFINMMRGKKVDQKLLQRLKTILNVVEAVLNDAEKKQITDPAVKRWLEDLQDAVYDADDLLDEVATKAATQKDPPGNFLSRFLNSQDREMVSRIEEIIARLEDIAKHKDILRLEKIAAKNMSGRIPSTSLVKKSDIFVGRDKERDAIVNLLLDDAYNGELSVIPIVGMGGIGKTTLAKLVYNDDTVQQKFHVKAWVCVGEEEFDVLKVTKAVIEKTCSACYSNDLDTAQNHLKNGLTGKNFLVILDDVWSSNRERWESFLTPFECGSEGGKILVTTRLDTVASVVKTKHNEAHNLSLLNEEQCWSVFANRAWDPSESRDCSTLEEIGRKIVKKCKGLPLAAQALGGLLRGKDNEKDWIDVLNSEFWELSEEDSGILPALRISYYHLPSYLKRCFVYCCLYPKDYEFYRDELTLLWMAEGLLLQPKGGNILKNVGYEYFDDLVSRSFFQRSNSDDNTFVMHDLMHDLTTFYGGKFFSSMLEHKTAAKHDMKTRHLSCARRKNDDDSLMKIMEACNRLKHVRTLMQINLHKGGVIPEGDGVTVPCDLLEQLKCLRVLSFNFSSDDENLMHSSIGKLIHLRFLDLSFTSIVTLPESLSCLYNLQTLKLRECNKLKKLPSKMQNLVNLRHLDISGTDDLEEMPKKMSELKDLQFLSSYVAGKHEENGIGELGELAHLHGSLSIEKLENVKNSGEASSARMYEKIHLNALDLSWTSFEESEVCDSQTEKAILDKLCPHKDLKMLFIWRYRGTMFPDWVGQSSYHNMTVLMLSGCRNCWMVPSLGQLPSLERLIIEEFEKVKKIGGSFYKGDGTHQHQETPFRSLKFLMIQRMPCWEEWESYECDDDDHAPFPKLEELWIEDCPKLRRDLPTFLPSLKQLRIRGCEELGCYLPRAPILRELFILGKQKARMRDLPLSLQVLGIGGKQLVEDVFEAMTHTQPTSLRYLEISNCSSAVSLPGDALPPLLKHLRINNCKNVEFPMQHQQHHSLMELKIDNSCDSLTSFALPAFPNLWSLTIERCENLTSLEVSQSQSLRGLWIEECPKLENIIRLPASLWELRIRECPLLGEGIERKDPHIWPSISHIPRIQLDGKWIRNDSTS*	1121

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo12g3132	1120	Gene3D	Ribonuclease Inhibitor	526	921	IPR032675	-
	Amo12g3132	1120	PRINTS	Disease resistance protein signature	187	202	-	-
	Amo12g3132	1120	PRINTS	Disease resistance protein signature	260	274	-	-
	Amo12g3132	1120	PRINTS	Disease resistance protein signature	359	373	-	-
	Amo12g3132	1120	PRINTS	Disease resistance protein signature	644	660	-	-
	Amo12g3132	1120	Coils	Coil	41	61	-	-
	Amo12g3132	1120	Gene3D	-	18	134	-	-
	Amo12g3132	1120	Gene3D	Ribonuclease Inhibitor	922	1093	IPR032675	-
	Amo12g3132	1120	PANTHER	OS05G0414200 PROTEIN	34	978	-	-
	Amo12g3132	1120	SUPERFAMILY	L domain-like	483	907	-	-
	Amo12g3132	1120	Gene3D	-	407	493	IPR036388	-
	Amo12g3132	1120	PANTHER	DISEASE RESISTANCE PROTEIN RP	34	978	IPR044974	GO:0006952
	Amo12g3132	1120	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	151	422	IPR027417	-
	Amo12g3132	1120	Gene3D	-	322	406	IPR042197	-
	Amo12g3132	1120	CDD	RX-CC_like	41	131	IPR038005	-
	Amo12g3132	1120	Pfam	Rx N-terminal domain	10	102	IPR041118	-
	Amo12g3132	1120	Pfam	NB-ARC domain	168	387	IPR002182	GO:0043531
	Amo12g3132	1120	Gene3D	-	141	317	IPR027417	-
	Amo12g3132	1120	SUPERFAMILY	L domain-like	872	1088	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo12g3132	Amo-Chr12	119878571	119883396	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Amo12g3132	184	491	WRKY Transcription Factor Family	AT5G45050	27.245	1.05e-09	61.2

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo12g3132	-		-	adu:110278296	1774.21