Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3131 ATGCGAGGAAAGAAGGTTGACCAAAAGCTGCTTCAAAGGCTGAAGACCATTCTGAATGTGGTTGAAGCTGTGCTGAATGATGCTGAGAAGAAACAGATTACTGACCCTGCTGTCAAGAGGTGGCTCGAAGATCTCCAAGATGCTGTCTATGATGCTGATGACTTGTTGGATGAAGTCGCCACCAAAGCTGCCACTCAGAAAGATCCACCAGGTAACTTCCTGTCTCGCTTTCTCAATTTGCAAGATAGGGAGATGGTTACTAGGATTGAAGAAATCATTGCTAGACTAGAAGATATTGCAAAACACAAAGATATCCTTCGTCTAGAAAAGATTGCAGCCAAGAACATGTCTGGGAGGATTCCATCAACCTCACTGGTTAAAAAATCTGATATATTTGTTGGAAGGGACAAAGAGAGGGATGCCATAGTGAAATTGTTGTTAGATGACGATGGTGAGCTGTCTGTGATTCCCATCGTGGGCATGGGTGGGATAGGAAAAACTACTTTGGCTAAATTGGTTTATAATGATGACAAAGTGCAGCAGAAGTTTAATGTGAAGGCATGGGTTTGTGTTGGTGAGGAGGAATTTGATGTTCTTAAGGTCACAAAGGCTGTGATAGAGAAAACTTGCAGTCCTTGTTACTCAAATGATTTAGATACAGCTCAAAATCATTTGAAGAATGGGCTAGCGGGGAAGAACTTCTTGGTTGTTCTGGATGATGTATGGAGCAGTAATCGTGAGCATTGGGAAAATTTTCTAACTCCTTTTGAATGTGGAAGTCAGGTCTGCAAGATTCTTGTAACAACACGTCTTGATACAGTTGCTTCTGTGGTGAAAACTAGACATAATGAAGCTCACAATATGAGTTTGTTGGATGAAGAACAATGCTGGTCAGTGTTTGCAAATCGAGCATGGGATCCTGCAGAATCCCGAGATCATTCAGCTTTAGAAGAAATTGGTAGAAAAATTGTTAAAAAATGTAAAGGATTACCTTTGGCAGCTCAAACAGTTGGAGGGTTATTGAGAGGGAAAGATAATGAAAAGGATTGGAATGATGTTTTGAATAGTGAATTCTGGGAACTCTCTGAGGAGGATAGTGGGATTCTTCCTGCATTGAGAATCAGTTATTACCACCTCCCATCCTATTTAAAACGTTGCTTTGTTTATTGTTCTTTGTATCCGAAGGACTTTGAATTTGATAGAGATGAATTGACATTATTGTGGATGGCGGAAGGTCTTTTGCTAGAACCAAAGAGTGGAAACACTTTGGAAGAAATTGGTTATGAATATTTTGATGATTTGGTTTCGAGATCATTTTTTCAACATTCTAACACTTATGTGAATTCATTTGTGATGCACGATCTCATGCATGATTTAGCAAAGTTCTATGGTGGAAAGTTCTTTTCTAGTATCCTTGAACTCAAGAATGCAGCAAAGCATGATACCAGAACTCGCCACTTGTCATGTGCTCGCCGCAAGAATGATGAGGATTTGCTTATGAAGATCACGGAAGCATGCCATAGGTTAAAACATGCGAGGACATTGTTGCAAATTTATAATGAATATGGTCTATTCTCAGTGGGAGATAGAGTAGCCGTTTCTTGTGACTTACTAGAACAATTAAAGTGTTTACGAGTTTTGTCATTTAATTTTCTTTCAGATGATGAAAACTTGATGCATGGTTCAATTGGCAAATTGATCCATTTGCGTTATTTGGATCTTTCATACACATCCATCGTGACTTTGCCCGAGTCTTTAAGTTGCTTGTACAATTTACAAACCTTGAAGTTGAGAAACTGTAGAAAACTTAAAAAGCTTCCTAGCAAGATGCAAAATCTTGTGAATTTGCGTCATCTTGATGTTTTTGAAACTGGTTTGGAAGAGATGCCAAAAAAGATGAGTAAATTAAAAGATTTGCAATTTTTAAGTTGCTATATTGCGGGCAAACATGAAGAGAATGGGATTGGAGAATTGGGAGAGCTAGCACATCTTCATGGATCATTGTGGATTGAGAAATTAGAGAATGTTAAGAATAGTGGTGAAGCATCGAGTGCAAGAATGGATGAAAAAATGCACCTGAATGCTTTAGATTTGAGTTGGACATCATTTGAAGAAAGTGAGGTTTGTGATTCCCAAACTGAAAAAGATATACTTGAGAAATTACGTCCTCACAAAGACTTGAAGAAGCTATCCATCAGGCGTTACAGAGGTACGATGTTTCCGGATTGGGTAGGGCAGTCTTCGTACCACAACATGACTGAGTTGGAGCTGAGTGGATGCAGGAATTGTTGGGTGCTTCCTTCACTTGGACAGTTACCTGCTCTAATGAGATTGGAGATTTCAGGTTGTGATATGGTGAAGAAGATTGGTGGGTCATTCTATAAGGGTGATGGAACTCATCATCATCAGGAGACACCCTTCCGATCCCTTAGATCTCTGGACTTTCGTCATATGCGTTGCTGGGAGGAATGGGAGTCATGCATAGGGGATTTGCCCAATTTTCTTCCGGCTTTGAAAGAACTTTTCATTACTGGATGCAAGCAGCTTGGTTGTTATCTGCCAAGAGCTCCCATGATACGCGAATTAAGAATAGAATGCAAACAGGAAGCAAGAATGCGGGAGCTACCACTTTCTATGTTGGAGAAACTAGTAATTAATGGAGAGCAGCAGGTGGAGTATGTGTTTGAGGCCATGACCCACACCCAACCAACCTCTCTCATACAGCTAGACATCTCAGAGTGCTCATCAGCCATATCATTTCCAGGGGATTCTTTGCCCCCTTCATTGCAAGAGCTGTACATCACAGATTGCAAGAATGTAGAATTCCCAATGCAACACCAACAACATGAGCCACTAAGGAGTCTTACAATAGACAACAGCTGCGATTCACTTACATTCTTCGCATTGCCAGCGTTCCCAAATCTCTTGTTTCTGACAATTGAAAGATGTGAAAATTTGACATCTCTGGAGCTGTCACAGTCACAGTCCCTCCAACACTTATCAATTTCAGAGTGCCTTAAGCTGGAGAACATAATAAGGCTGCCTGCCTCTTTAAGGGAACTCAGAATCGATGACTGTCAGTTGTTGGGTGAAGGCATAGAGAGGAAGGACCCCCACATTTGGCCATCCATTTCCCACATCCCCTACATTAATTGCATACCAAAAACCACTTCCCTTACCCTTTCATACTTTCTTGATCTTGTGAACATGGCTGCTGAACTTGTTGGAGGAGCTTTCCTCTCTTCTTTTCTCAATGTCCTTTTCGACAGGCTGTCTGATCCTGATTTCATCAACATGATGAGAGGAAAGAAGGTTGACCAGAAGCTGCTTCAAAGGCTGAAGACCATTCTGAATGTGGTTGAAGCTGTGCTGAATGATGCTGAGAAGAAACAGATCACTGACCCTGCTGTCAAGAGGTGGCTCGAAGATCTCCAAGATGCTGTCTATGAAGCTGATGACTTGTTGGATGAAGTTGCTACCAAAGCTGCCACTCAGAAGGATCCACCAGGTAACTTCCTGTCTCACTTTCTCAATTCGCAAGATAGGGAGATGGTTACTAGGATTGAAGACATCATTGCTAGACTAGAAGATATTGCAAAACACAAAGATATCCTTCGACTAGAAAAGATTGCAGCCAAGAACATGTCTGGGAGGATTCCATCAACCTCGCTGGTTAAAAAATCTGATATATTTGTTGGAAGGGACAAAGAAAGGGATGCCATAGTGAATTTGCTTTTAGATGATGCTTACAATGGTGAACTGTCCGTGATTCCCATCATGGGCATGGGTGGGATAGGAAAAACTACTTTGGCTAAATTGGTTTATAATGATGACAAAGTGCAGCAGAAGTTTAATGTGAAGGCATGGGTTTGTGTTGGTGAGGAGGAATTTGATGTTCTMAAYGTCACAAAGGCTGTGATAGAGAAAACTTGCAGTCCTTGTTACTCAAATGATTTAGATWCAGCTCAAAATCATTTGAAGAATGGGCTAGCGGGGAAGAACTTCTTGGTTGTTCTGGATGATGTATGGAGCAGTAATCGTGAGCTTTGGGAAAGTTTTCTAACACCTTTTGAATGTGGAAGTGAGGGAGGCAAGATTCTTGTAACAACACGTCTTGATACAGTTGCTTCTGTGGTGAAAACTAAACATAATGAAGCTCACAATTTAAGTTTGTTGGATGAAGAACAATGCTGGTCGGTGTTTGCAAATCGAGCATGGGGTCCTACAGAATCCCGAGATCATTCAGCTTTAGAAGAAATTGGTAGAATAATTGTTAWAAAATGTAAAGGATTACCTTTGGCAGCTCAAACAGTTGGAGGGTTATTGAGAGGGAAAGATAATGAAAAAGATTGGAATGATGTTTTGAATAGTGAATTCTGGGAACTCTCTGAYGAGGATAGTGGGATTCTTCCTGCATTGAGAATCAGTTATTATCACCTCCCATCATATTTGAAACGCTGCTTTGTTTATTGTTCTTTGTTTCCGAAGGACTTTGAATTTGACAGAGATGAATTGACATTATTGTGGATGGCAGAAGGTCTTTTGCTACAACCAAAGAGTGGAAACACTTTGGAAGAAATTGGTTATGAATATTTTGATGATTTGGTTTCGAGATCATTTTTTCAACATTCTAACTCTGCTAAAAATTCATTTGTAATGCACGATCTCATGCATGATTTAGCAAAGTTCTATGGTGGAAAGTTCTTTTCTAGTATCCTTGATCTCAAGAATGCAGCAAAGCATGATACCAAAACTCGCCACTTGTCATGGGCTCGCAAGAATGACGATGATTCGCTTATGAAGATCATGGAAGCATGCAATAGGTTAAAACATGTGAGGACATTGTTGCAACTCAATTTGCATAAAGGTCATGGAACCCGAGAGGGAGATAGAGTAGCCGTTCCTTGTGACTTACTAGAACAATTGAAGTGCTTACGAGTTTTGTCATTTAAWTTTTTTTCAGATGATGAAAACTTGTTGCATCGTTCAATTGGTGAATTGATCCATTTGCGTTATTTGGATCTTTCATACACATCCATCGTGACATTGCCCGAGTCYTTAWGTTTSTTGTACAARTTACAAACCCTGAAGTTGAAACTTTGTAGAAATCTTAAAAAGCTTCCCAGWAACATGCAAAATCTTGTGAAATTACATCATCTTGATATTGGCGGCACTGATTTGGAAGAGATGCCAAAAAAGATGAGCAAATTAAAAGATTTGCAATTTTTAAGTTTCTATATTGCGGGCAAACATGAAGAGAATGGGATTGGAGAATTGGGAGAGCTAGCACATCTTCATGGGTCATTTTGTATTGAGAAATTGGAGAATGTTAAGAATAGTGGTGAAGCATGGAATGCAAGGATGGATGAAAAAATACACCTGAATGCTTTATATTTGAGGTGGTCATGTTCATCATTTGAAGAAAGTGAGGTTTGTGATTCCCAAAGTGAAAAAGATGTACTTGACAAATTACGTCCTCACAAAGACTTGAAGGAGCTATTCATCTGGGATTACAGAGGTACCATGTTTCCGGATTGGATAGGGCAGTCTTGGTACCACAAGATGACTGAGTTGGAGCTGAGTGGATGCAGGAATTGTTGGGTGCTTCCTTCACTTGGACAGTTACCCTCTCTAATGACATTGAAGATTTCAGATTGTGATATGGTGAAGATGATTGGTGGAACATTCTATAAGGGTGATGGAACTCATCATCATCAGCAAACACCCTTCCCATCCCTGAAATATCTGTCATTTTATTATATGAGTTGCTGGGAGGAATGGGAGTCATATGAATGTGATGAAGATGATGCACCATTTCCTCAACTTGAGCATGTATTGATAGCGAACTGTCCTAAGTTAAGAGGAGTTTTGCCCTCTTTCCTTCCTGCTTTGAAAGAACTTGTCATTTCAGGATGCGAGGAGCTTGGTTGTGATCTGCCAAGAGCTCCCATCATACGCCAATTAGAAATATATGGCAAACAGGAAGCAAGAATGCGGGACCTACCACTTTCACTGCAAAATCTAAGAATCGAAGGAAACCAACTTGTGGATTCTCTGTTTGAGGCCATGACCCACACCCAACCAACCTCTCTCAGTTATTTAAGAATCTCAAATTGCTCATCAGTCGTATCATTTCCAGGGGATGCTTTGCCCCCTTCGTTGGAAGATTTGCGCATATACGATTGCAAGAATGTAGAATTCCCAATGCAACACCAACAACATGAGTCACTAACGTATCTTACAATAAAGAACAGCTGTGATTCACTCACATCCTTCGCATTATCAGCATTCTCAAATCTCTATTATCTTAGAATCCAAGAACTTGAAAATTTGACATCTCTGGAGGTGTCACAGTCACAGTCCCTCCAAGACTTATCAATTTCAGGCTGCCCTAAGCTGGAGAACATAATAAGGCTGCCTGCCTGTTTAAGGGTACTAAGAATCAGAGAATGTGGGTTGTTGGGTGAAGGCATAGAGAAGAAGGACCCCCACATTTGGCCATCCATTTCCCACATCTCCTATATTTATGTTGATGACAAACGGATTCGCAATGACTCAACATCTTAA 6567 0.4034 MRGKKVDQKLLQRLKTILNVVEAVLNDAEKKQITDPAVKRWLEDLQDAVYDADDLLDEVATKAATQKDPPGNFLSRFLNLQDREMVTRIEEIIARLEDIAKHKDILRLEKIAAKNMSGRIPSTSLVKKSDIFVGRDKERDAIVKLLLDDDGELSVIPIVGMGGIGKTTLAKLVYNDDKVQQKFNVKAWVCVGEEEFDVLKVTKAVIEKTCSPCYSNDLDTAQNHLKNGLAGKNFLVVLDDVWSSNREHWENFLTPFECGSQVCKILVTTRLDTVASVVKTRHNEAHNMSLLDEEQCWSVFANRAWDPAESRDHSALEEIGRKIVKKCKGLPLAAQTVGGLLRGKDNEKDWNDVLNSEFWELSEEDSGILPALRISYYHLPSYLKRCFVYCSLYPKDFEFDRDELTLLWMAEGLLLEPKSGNTLEEIGYEYFDDLVSRSFFQHSNTYVNSFVMHDLMHDLAKFYGGKFFSSILELKNAAKHDTRTRHLSCARRKNDEDLLMKITEACHRLKHARTLLQIYNEYGLFSVGDRVAVSCDLLEQLKCLRVLSFNFLSDDENLMHGSIGKLIHLRYLDLSYTSIVTLPESLSCLYNLQTLKLRNCRKLKKLPSKMQNLVNLRHLDVFETGLEEMPKKMSKLKDLQFLSCYIAGKHEENGIGELGELAHLHGSLWIEKLENVKNSGEASSARMDEKMHLNALDLSWTSFEESEVCDSQTEKDILEKLRPHKDLKKLSIRRYRGTMFPDWVGQSSYHNMTELELSGCRNCWVLPSLGQLPALMRLEISGCDMVKKIGGSFYKGDGTHHHQETPFRSLRSLDFRHMRCWEEWESCIGDLPNFLPALKELFITGCKQLGCYLPRAPMIRELRIECKQEARMRELPLSMLEKLVINGEQQVEYVFEAMTHTQPTSLIQLDISECSSAISFPGDSLPPSLQELYITDCKNVEFPMQHQQHEPLRSLTIDNSCDSLTFFALPAFPNLLFLTIERCENLTSLELSQSQSLQHLSISECLKLENIIRLPASLRELRIDDCQLLGEGIERKDPHIWPSISHIPYINCIPKTTSLTLSYFLDLVNMAAELVGGAFLSSFLNVLFDRLSDPDFINMMRGKKVDQKLLQRLKTILNVVEAVLNDAEKKQITDPAVKRWLEDLQDAVYEADDLLDEVATKAATQKDPPGNFLSHFLNSQDREMVTRIEDIIARLEDIAKHKDILRLEKIAAKNMSGRIPSTSLVKKSDIFVGRDKERDAIVNLLLDDAYNGELSVIPIMGMGGIGKTTLAKLVYNDDKVQQKFNVKAWVCVGEEEFDVLNVTKAVIEKTCSPCYSNDLDXAQNHLKNGLAGKNFLVVLDDVWSSNRELWESFLTPFECGSEGGKILVTTRLDTVASVVKTKHNEAHNLSLLDEEQCWSVFANRAWGPTESRDHSALEEIGRIIVXKCKGLPLAAQTVGGLLRGKDNEKDWNDVLNSEFWELSDEDSGILPALRISYYHLPSYLKRCFVYCSLFPKDFEFDRDELTLLWMAEGLLLQPKSGNTLEEIGYEYFDDLVSRSFFQHSNSAKNSFVMHDLMHDLAKFYGGKFFSSILDLKNAAKHDTKTRHLSWARKNDDDSLMKIMEACNRLKHVRTLLQLNLHKGHGTREGDRVAVPCDLLEQLKCLRVLSFXFFSDDENLLHRSIGELIHLRYLDLSYTSIVTLPESLXXLYKLQTLKLKLCRNLKKLPXNMQNLVKLHHLDIGGTDLEEMPKKMSKLKDLQFLSFYIAGKHEENGIGELGELAHLHGSFCIEKLENVKNSGEAWNARMDEKIHLNALYLRWSCSSFEESEVCDSQSEKDVLDKLRPHKDLKELFIWDYRGTMFPDWIGQSWYHKMTELELSGCRNCWVLPSLGQLPSLMTLKISDCDMVKMIGGTFYKGDGTHHHQQTPFPSLKYLSFYYMSCWEEWESYECDEDDAPFPQLEHVLIANCPKLRGVLPSFLPALKELVISGCEELGCDLPRAPIIRQLEIYGKQEARMRDLPLSLQNLRIEGNQLVDSLFEAMTHTQPTSLSYLRISNCSSVVSFPGDALPPSLEDLRIYDCKNVEFPMQHQQHESLTYLTIKNSCDSLTSFALSAFSNLYYLRIQELENLTSLEVSQSQSLQDLSISGCPKLENIIRLPACLRVLRIRECGLLGEGIEKKDPHIWPSISHISYIYVDDKRIRNDSTS* 2189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3131 2188 Pfam Rx N-terminal domain 8 72 IPR041118 -
Amo12g3131 2188 Pfam Rx N-terminal domain 1079 1170 IPR041118 -
Amo12g3131 2188 SUPERFAMILY L domain-like 451 854 - -
Amo12g3131 2188 SMART LRR_typ_2 613 636 IPR003591 -
Amo12g3131 2188 SMART LRR_typ_2 1667 1690 IPR003591 -
Amo12g3131 2188 SMART LRR_typ_2 566 589 IPR003591 -
Amo12g3131 2188 SMART LRR_typ_2 1714 1737 IPR003591 -
Amo12g3131 2188 Gene3D Ribonuclease Inhibitor 875 1037 IPR032675 -
Amo12g3131 2188 PANTHER OS05G0414200 PROTEIN 1103 2135 - -
Amo12g3131 2188 SUPERFAMILY RNI-like 1910 2179 - -
Amo12g3131 2188 Coils Coil 1110 1130 - -
Amo12g3131 2188 Gene3D Ribonuclease Inhibitor 1995 2162 IPR032675 -
Amo12g3131 2188 CDD RX-CC_like 11 101 IPR038005 -
Amo12g3131 2188 Gene3D - 1087 1201 - -
Amo12g3131 2188 Gene3D - 4 99 - -
Amo12g3131 2188 PANTHER DISEASE RESISTANCE PROTEIN RP 5 1008 IPR044974 GO:0006952
Amo12g3131 2188 PANTHER DISEASE RESISTANCE PROTEIN RP 1103 2135 IPR044974 GO:0006952
Amo12g3131 2188 Gene3D - 1476 1563 IPR036388 -
Amo12g3131 2188 Gene3D - 375 462 IPR036388 -
Amo12g3131 2188 SUPERFAMILY L domain-like 1552 1975 - -
Amo12g3131 2188 Coils Coil 11 31 - -
Amo12g3131 2188 CDD RX-CC_like 1110 1200 IPR038005 -
Amo12g3131 2188 PANTHER OS05G0414200 PROTEIN 5 1008 - -
Amo12g3131 2188 SUPERFAMILY RNI-like 809 1047 - -
Amo12g3131 2188 Gene3D Ribonuclease Inhibitor 496 874 IPR032675 -
Amo12g3131 2188 Gene3D Ribonuclease Inhibitor 1594 1994 IPR032675 -
Amo12g3131 2188 PRINTS Disease resistance protein signature 587 603 - -
Amo12g3131 2188 PRINTS Disease resistance protein signature 155 170 - -
Amo12g3131 2188 PRINTS Disease resistance protein signature 327 341 - -
Amo12g3131 2188 PRINTS Disease resistance protein signature 228 242 - -
Amo12g3131 2188 Gene3D - 1391 1475 IPR042197 -
Amo12g3131 2188 Gene3D - 290 374 IPR042197 -
Amo12g3131 2188 Pfam NB-ARC domain 137 355 IPR002182 GO:0043531
Amo12g3131 2188 Pfam NB-ARC domain 1237 1456 IPR002182 GO:0043531
Amo12g3131 2188 Gene3D - 1209 1387 IPR027417 -
Amo12g3131 2188 Gene3D - 111 286 IPR027417 -
Amo12g3131 2188 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1220 1491 IPR027417 -
Amo12g3131 2188 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 121 390 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3131 Amo-Chr12 119820077 119860862 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g3131 142 461 WRKY Transcription Factor Family AT5G45050 26.269 5.68e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g3131 - - adu:110278296 1666.74