Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3115 ATGAGCCGCGGAGCAGGAGCTGGTGGAGCGAAGGGGAAGAAGAAGGGAGCGAGCTTCGTGATCGATTGCGCGAAGCCCGTTGAGGATAAGATCATGGACATCGCATCGCTCGAGAAGTTCCTTCAAGAGAGGATCAAGGTCGGAGGCAAAGCCGGTGCTCTCGGCGATTCCGTCACCGTTACAAGGGACAAGTCCAAGATCACCGTCACCTCCGATTCCAGCTTCTCCAAGCGATACCTGAAATACTTGACTAAGAAGTACTTGAAAAAGCACAATGTGAGGGATTGGCTTCGTGTGATCTCCTCCAACAAGGACAGGAATGTGTATGAGTTGAGATACTTCAACATTGCCGAGAATGAGGGTGAAGAGGAAGAGTGA 378 0.5132 MSRGAGAGGAKGKKKGASFVIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTRDKSKITVTSDSSFSKRYLKYLTKKYLKKHNVRDWLRVISSNKDRNVYELRYFNIAENEGEEEE* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3115 125 Pfam Ribosomal L22e protein family 15 123 IPR002671 GO:0003735|GO:0005840|GO:0006412
Amo12g3115 125 Gene3D - 7 125 IPR038526 -
Amo12g3115 125 PANTHER 60S RIBOSOMAL PROTEIN L22 1 125 IPR002671 GO:0003735|GO:0005840|GO:0006412
Amo12g3115 125 PANTHER - 1 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3115 Amo-Chr12 119641799 119643210 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g3115 1 125 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 86.400 6.30e-66 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g3115 K02891 - pop:7487786 202.601