Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3113 ATGGTTGGGCTCTTCAGTGTAATGGGGCATGAGAAATGTGAAAGCTACTTAATTTTCAGTGGAGAGGCTGCTCTTGGTGACAATTTCAGAACTTTTCTGTATTTTCTTGGTCTTGCATATTGTTTCCTTGGATTATCAGCTATAACAGCTCGTTTCTTCAAGTCCATGGAAAATGTGGTGAAGCACACAAGGAAAGTTGTGGAGATAGATCCTGTTACTCAGACTGAAGTAGTTAGACATGAGAAAGTTTGGAATTACACCATTGCGGATATTAGCCTATTAGCCTTCGGAACTAGCTTTCCTCAGATATCATTAGCCACCATTGATGCTATACGGAATGTCGGGAACTTGTATGCTGGAGGTTTGGGGCCCGGAACACTTGTTGGTTCTGCAGCTTTTGACCTTTTCCCTATCCATGCTGTCTGTGTAGTAGTTCCAAAAGCAGGGGAGCTGAAAAAGATTGCTGACATAGGAGTATGGTTGGTGGAGTTGTTTTGGTCATTTTGGGCTTATATTTGGTTATACATTATTTTGAAGGTGTGGACTCCAGATGTGGTGACTCTATGGGAGGCCTTGTTGACAGTACTGCAGTATGGATTACTGTTGACCCATGCTTATGCTCAAGACAAGCGATGGCCATATATTTCTCTACCTATTGAACGAGATGAGAGGCCTGAGGAATGGGTGCCAGAAGAATCTCCTTATTTTATACAAGAAAGCCTCGACAAAATGGACTTTTCTGAGACAAGTCCCATGAGTGAAGAATATGGGGAGACTGTTGATATTTTCTCCATTCATTCAGTAAATCCCACCGACCAAAAATATGAAAGAGTACATCAAATAGATGATAATGTTGCTCAAATTTCTGATAAAGCTAAGGAAATGATGACAGAGGATGTGCATTTGCTTAAAATTTGGAGGCAGCAATTTGTGGATGCACTGACGTTGGAGAGCCTGGAGACAAAAAAATTGAAGAATTCCTATCTCCGCATGGGTAGAATATTATGGCAATCACTGCTTATACCATGGAGGTTTCTGTTTGCTTTTGTTCCTCCATGCCATATAGCTCATGGATGGATCTCCTTCATTTGCTCTTTGCTTTTCATCAGTGGAATAGCTTACATTGTTACTAGGATCACAGATCTTATAAGTTGTGTCACAGGAATAAATGCTTATGTCATAGCGTTTACAGCACTGGCCAGCGGAACCTCGTGGCCCGATTTAGTGGCAAGCAAGATTGCTGCAGAACGTCAAATAACTGCAGACTCAGCAATTGCAAACATCACTTGCAGTAATTCGGTGAACATATATGTTGGCATTGGTGTTCCATGGCTTATTGATACCTTATACAACTTCATAGCATATAGAGAACCTCTTCGGATCCAAGATGCAGGGGGGCTAAGCTTTTCCTTGCTTGTTTTCTTCTCTACTTCTGTTGGGTGTATATCAGTTTTGGTTTTACGGCGTTTAATTTTTGGCGCGGAGCTAGGAGGACCAAGGATCTGGGCATGGATTACTTGTGTGTACTTCATGTTTCTGTGGATTATTTTTGTTGTACTATCTTCACTCAAAGTTTCTGGGTTCATTTAG 1590 0.4138 MVGLFSVMGHEKCESYLIFSGEAALGDNFRTFLYFLGLAYCFLGLSAITARFFKSMENVVKHTRKVVEIDPVTQTEVVRHEKVWNYTIADISLLAFGTSFPQISLATIDAIRNVGNLYAGGLGPGTLVGSAAFDLFPIHAVCVVVPKAGELKKIADIGVWLVELFWSFWAYIWLYIILKVWTPDVVTLWEALLTVLQYGLLLTHAYAQDKRWPYISLPIERDERPEEWVPEESPYFIQESLDKMDFSETSPMSEEYGETVDIFSIHSVNPTDQKYERVHQIDDNVAQISDKAKEMMTEDVHLLKIWRQQFVDALTLESLETKKLKNSYLRMGRILWQSLLIPWRFLFAFVPPCHIAHGWISFICSLLFISGIAYIVTRITDLISCVTGINAYVIAFTALASGTSWPDLVASKIAAERQITADSAIANITCSNSVNIYVGIGVPWLIDTLYNFIAYREPLRIQDAGGLSFSLLVFFSTSVGCISVLVLRRLIFGAELGGPRIWAWITCVYFMFLWIIFVVLSSLKVSGFI* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3113 529 PANTHER SODIUM/CALCIUM EXCHANGER 304 529 - -
Amo12g3113 529 PANTHER SODIUM/CALCIUM EXCHANGER 10 212 - -
Amo12g3113 529 PANTHER NA/CA-EXCHANGE PROTEIN, ISOFORM G 304 529 - -
Amo12g3113 529 PANTHER NA/CA-EXCHANGE PROTEIN, ISOFORM G 10 212 - -
Amo12g3113 529 Gene3D - 86 223 IPR044880 -
Amo12g3113 529 Gene3D - 316 523 IPR044880 -
Amo12g3113 529 Pfam Sodium/calcium exchanger protein 34 206 IPR004837 GO:0016021|GO:0055085
Amo12g3113 529 Pfam Sodium/calcium exchanger protein 358 521 IPR004837 GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3113 Amo-Chr12 119625458 119630332 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g3113 7 529 Antiporters AT2G47600 71.970 0.0 771
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g3113 K03452 K05849 gmx:100792839 887.1