Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3106 ATGGCTGCAAGATTTGTGGGAGAAGCTTTTCTCAACTCTGCACTTGGCACTATCTACGACATGCTGATTTCACCCTTACTTGTCAACTTCATCCAGMGAAAGAAGCTTAACCGGAAGCTGGTTGAGAAGCTGGAGACAGTTCTGAAGGCTGCTCATGCTGTGATCAATGACGCCGAGCGGAGGCAGATCGAAGAGGAAGMTGTGAAGVACTGGCTGGACAGGCTGAAGTATGCTGTGTACGATGCTGAAGACATACTKGATGAAGTCACCACCAAAGCTGCCATTCAAAAGGTTCAAGGTAACTCTCTGTCTCGCTATGTCAATTTGCATGGTGATGGTGAGATAGTAACCAAGATAGAAGAGATCATTRMTGCATTAGAGTCAATTGTAAATGAGAAAGATGGTCTTGGCTTGAAGGAGATACCGGTGGAGGACATGTCATGGAGGATCCCCTCAACATCTCTGGTTGGTGTGCATCAAATATATGGCAGGGACCAAGACAGGGAGGCCATAGTAAAACTGTTGTTAGATGTTACCAATGACGGTGGAATATCCGTGATTCCTATGGTCGGCATGGGTGGAATAGGAAAGACTACTTTGGCTCAGATGGTTTACAATGATGACCGAGTGAAACAAAAATTTGATGTTAAGGCATGGGTTTGTGATGGGCAAGAAGAATTTGATGTTCTTAAGGCGACAAAGACGGTGATGGAGAAAGTAACTTCTAGTTCTTGCAACTCAACTGAGCTAAACACAATTCAGGAGAGTTCAAAGGAAGTCCTAGCAGGGAAGAAGTTGTTGGTTGTTTTGGACGACATGTGGAGTAACAATTATGATGCCTGGATAAGTTTTTTAAAGCCTTTCAAATCTAGTAACGGGGGTGTTAAGATTCTTGTAACAACTCGTCTTGATTCGATTGCTGATATGGTGAAAACTATTCCAACTTTCCGTTTGAGTTTGTTGGGTGATGATCACTGCTGGTCAGTGTTTGCAGATCATGCATGTCTTAATTCTGCTGAACCTCATATCCGTTCTGCTTTAGAAGTAGTTGGTCGAAAAATTGTCAAAAAGTGTAATGGGTTAGCTTTGGCTGCTCAAACACTTGGAGGTTTATTAAGAGCAAGAAAAGAAATAGCAGATTGGGAGTTTATATTGAGGAATGAAATTTGGGAACTTCCCAAAAAAGATAGTGGGATTCTTCCAGCATTAAGAATTAGTTATCACTACCTCCCTTCCCACTTAAAACGTTGCTTTGTTTATTGTTCTTTATTCCCAAAAGACTATGAATTCAAAAGAGATGAACTGGTGTTATTGTGGATGGCAGAAGGTCTTTTGCAGCAACCGAAGAGTGGCAGCACTTTAGAAGAAGTTGGTTCTAAATATTTTAATGATTTGGTTTCAAGATCGTTTTTCCAACATTCTAAAACCAATGAAAATTTATTTGTGATGCACGATCTCATGCATGATTTAGCAATATTCTACGGTGGAAAGTTCTTTTCTAGAAACTTTGAACTCAAAACTGCAGACAAGCATGATGCTTGTCCTCGTCATCTTTCATATGGTCTTGTCATCGATGATTCGTTATTCTCAGAGATCTCGGAAGTATGTGATTATTTAAAAAATGCAAGGACATTGCTGAATATCAGTTTTGAAACATGGGAGGATTCCACAGAGGAAGTTGATCTTTGTGGCTTATTTGCACAGTTGAAGCGCTTAAGGGTTTTGTCATTTAAATTCTTTCCTCTTTCATTGCTCGATTCAATAGGTGATTTGATCCATTTGCGTTATTTGGATCTCTCTCATTCACCTATTGAGACATTGCCAGAGTCAATGTGCAAATTTTATAATTTACAAACACTGAAGTTGAGTCATTGTGCAAGACTAGAAAAGCTTCCAATCAACATGCAGGATCTTGTAAATTTGCTTCATTTGGATCTCTCTTATTCGGCAATTGGGGTATTGCCCGAGTCATTGAGCAAATTGCATAATTTACAAACACTGAAGTTGACAGGATGTGGAGGACTCAAAAAGCTCCCAAGCAAGATGCAAGATCTTGTAAATATGCGCTATCTGGATATTGAAGATACTAATTTAGAAGAGATGCCAAAAGGGATGAGCAAATTAAAAGATTTGCAGATTCTGCATTACTATATTGTTGGCGAGCATGAAGAGAATGGGATAGGGGAATTGGGAGAACTTGTAAATCTTCAAGGGTCATTTCATATTAAGCAACTAGAGAATGCCGTTAATAGCAGTGAAGCTTGGAAAGCAAGAATGGTTGATAAGAAACACATCAATAATCTATGGTTGGAGTGGACATCAGCTGAAGATGGTGATATTGTTGATTCCGAAATCGAAAAAGATGTACTTGACAAATTACGTCCTCACAAAGACTTGAAGAAGCTATTCATCTGGGATTACAGAGGTACCATGTTTCCGGATTGGGTAGGGCAGTCTTCGTACCACAACATAACTGTGTTGGTGCTGAGGGGATGCAGGAATTGTTGGGTGGTTCCATCACTTGGACAGTTACCCTCTCTGGAGAGGCTAGTCATTAAAGAGCTCGAGAAGGTGAAGAAGATTGGTGGGTCATTCTATAAGGGTGATGGAACTCATCAGCATCAGGAGACACCCTTCCGATCCCTTAAATATCTGGCATTCCGTGATATGCCTTGCTGGGAGGAATGGGAGTCATATGAATGTAATGATGATGATGATGATGCACCATTTCCGAAACTTGAGGAGCTTATAATAGAGGACTGCCCTAAGTTAAGAGGAGATTTGCCCACTTTCCTTCCATCTTTGGAAGAACTCCACATTAGAGGATGCGAGGAGCTTGGTTGTTATCTGCCAAGAGCTCCCATCATACGCCAATTAATAATAGATGGCAAACAGGAAGCAAGAATGCGGGAGCTACCACTTTCCATGTTGGAGAGACTATGGGTTAATGGAGAGCAGCAGGTGGAGTATGTGTTTGAGGCCATGACCCACACCCAACCAACCTCTCTCATAGACCTAAGGATCTCAGAGTGCTCATCAGCTATATCATTTCCAGGGGATTCTTTGCCCCCTTCGTTGAAAGAGTTGCGCCTATACGATTGCAAGAATGTAGAATTCCCAATGCAACACCAACAACATTACTCACTAACGAGTCTTACAATAGACAACAGCTGTGATTCGCTTACATCCTTCGCATTGCCAGCGTTTCCAAATCTGAAGTTTCTCACAATCGCAAGAAGTGAAAATTTGACATCTCTGGAGCTGTCACAGTCACAGTCCCTCCGAGAATTAATAATTTCAGAGTGCCCTAAGCTGGAGAAGATAATAAGGGTGCCTGGCTCTTTAAGGGAACTCAGAATCAGAGAATGTGGGTTGTTGGGTGAAGGCATAGAGAGGAAGGACCCCCACATTTGGCCATCCATTTCCCACATCCCTCAAATTTATGTTGACGGCACAAAGATCCTCAATGACTCAACATCTTAA 3483 0.414 MAARFVGEAFLNSALGTIYDMLISPLLVNFIQRKKLNRKLVEKLETVLKAAHAVINDAERRQIEEEXVKXWLDRLKYAVYDAEDILDEVTTKAAIQKVQGNSLSRYVNLHGDGEIVTKIEEIIXALESIVNEKDGLGLKEIPVEDMSWRIPSTSLVGVHQIYGRDQDREAIVKLLLDVTNDGGISVIPMVGMGGIGKTTLAQMVYNDDRVKQKFDVKAWVCDGQEEFDVLKATKTVMEKVTSSSCNSTELNTIQESSKEVLAGKKLLVVLDDMWSNNYDAWISFLKPFKSSNGGVKILVTTRLDSIADMVKTIPTFRLSLLGDDHCWSVFADHACLNSAEPHIRSALEVVGRKIVKKCNGLALAAQTLGGLLRARKEIADWEFILRNEIWELPKKDSGILPALRISYHYLPSHLKRCFVYCSLFPKDYEFKRDELVLLWMAEGLLQQPKSGSTLEEVGSKYFNDLVSRSFFQHSKTNENLFVMHDLMHDLAIFYGGKFFSRNFELKTADKHDACPRHLSYGLVIDDSLFSEISEVCDYLKNARTLLNISFETWEDSTEEVDLCGLFAQLKRLRVLSFKFFPLSLLDSIGDLIHLRYLDLSHSPIETLPESMCKFYNLQTLKLSHCARLEKLPINMQDLVNLLHLDLSYSAIGVLPESLSKLHNLQTLKLTGCGGLKKLPSKMQDLVNMRYLDIEDTNLEEMPKGMSKLKDLQILHYYIVGEHEENGIGELGELVNLQGSFHIKQLENAVNSSEAWKARMVDKKHINNLWLEWTSAEDGDIVDSEIEKDVLDKLRPHKDLKKLFIWDYRGTMFPDWVGQSSYHNITVLVLRGCRNCWVVPSLGQLPSLERLVIKELEKVKKIGGSFYKGDGTHQHQETPFRSLKYLAFRDMPCWEEWESYECNDDDDDAPFPKLEELIIEDCPKLRGDLPTFLPSLEELHIRGCEELGCYLPRAPIIRQLIIDGKQEARMRELPLSMLERLWVNGEQQVEYVFEAMTHTQPTSLIDLRISECSSAISFPGDSLPPSLKELRLYDCKNVEFPMQHQQHYSLTSLTIDNSCDSLTSFALPAFPNLKFLTIARSENLTSLELSQSQSLRELIISECPKLEKIIRVPGSLRELRIRECGLLGEGIERKDPHIWPSISHIPQIYVDGTKILNDSTS* 1161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3106 1160 Pfam Rx N-terminal domain 11 102 IPR041118 -
Amo12g3106 1160 Coils Coil 41 61 - -
Amo12g3106 1160 Gene3D Ribonuclease Inhibitor 675 958 IPR032675 -
Amo12g3106 1160 Gene3D Ribonuclease Inhibitor 526 674 IPR032675 -
Amo12g3106 1160 SUPERFAMILY L domain-like 911 1127 - -
Amo12g3106 1160 SMART LRR_typ_2 685 708 IPR003591 -
Amo12g3106 1160 SMART LRR_typ_2 638 661 IPR003591 -
Amo12g3106 1160 SMART LRR_typ_2 591 614 IPR003591 -
Amo12g3106 1160 Gene3D - 147 314 IPR027417 -
Amo12g3106 1160 Gene3D - 14 122 - -
Amo12g3106 1160 PRINTS Disease resistance protein signature 260 274 - -
Amo12g3106 1160 PRINTS Disease resistance protein signature 358 372 - -
Amo12g3106 1160 PRINTS Disease resistance protein signature 186 201 - -
Amo12g3106 1160 PRINTS Disease resistance protein signature 659 675 - -
Amo12g3106 1160 CDD RX-CC_like 7 129 IPR038005 -
Amo12g3106 1160 Gene3D - 406 492 IPR036388 -
Amo12g3106 1160 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 421 IPR027417 -
Amo12g3106 1160 Gene3D Ribonuclease Inhibitor 959 1130 IPR032675 -
Amo12g3106 1160 PANTHER OS05G0414200 PROTEIN 30 667 - -
Amo12g3106 1160 PANTHER OS05G0414200 PROTEIN 650 1016 - -
Amo12g3106 1160 Gene3D - 321 405 IPR042197 -
Amo12g3106 1160 PANTHER DISEASE RESISTANCE PROTEIN RP 30 667 IPR044974 GO:0006952
Amo12g3106 1160 PANTHER DISEASE RESISTANCE PROTEIN RP 650 1016 IPR044974 GO:0006952
Amo12g3106 1160 SUPERFAMILY L domain-like 482 945 - -
Amo12g3106 1160 Pfam NB-ARC domain 166 385 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3106 Amo-Chr12 119558744 119562816 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g3106 184 707 WRKY Transcription Factor Family AT5G45050 24.643 3.41e-13 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g3106 - - aip:107626171 2194.08