Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3100 ATGGCTGCTGAACTTGTTGGAGGAGCTTTTCTATCTTCTTTTCTCAATGTTCTTTTTGACCGGCTGTCTGATCCTGAGATCGTCAACATGATGAGAGGAAAGAAGGTTGACCAGAAGCTGCTTCAAAGGCTGAAGACCATTCTAAATGTGGTTGAAGCTGTGCTGAATGATGCTGAGAAGAAGCAGATCACTGACTCTGCTGTCAAGAGGTGGCTCGAAGATCTCCAAAATGCTGTGTATGATGCTGATGACTTGTTGGATGAAGTCGCTACCAAAGCTGCTACTCAGAAGGATCCACCAGGTAACTTCTTGTCTCGCTTTCTCAATTTGCAAGATAGGGAGATGGTTAGTAGGATTGAAGAAATCATTGCTAGACTAGAGGATATTGCAAAACACAAAGATATCCTTCGTCTGGAAAAGATTGCAGCCAAGAACATGTCTGGGAGGATTCCTTCAACCTCCTTAGTTAAAAAATCTGATATATTTGTTGGAAGGGACAGAGAGCGAGATACCATAGTGAAATTGTTGTTAGATGATGTTAACAATGGTGAACTGTCTGTCATTCCCATTGTTGGCATGGGTGGGATAGGAAAAACTACTTTGGCTAAATTGGTTTACAATGATGACATGGTGCAGCAAACATTTAATGTGAAGGCATGGGTTTGTGTTGGTGAGGAGGAATTTGATGTTCTTAAGGTGACAAAGGCTGTGATAGAGAAAACTTGTAGTCCTTGTTACTCAAATGATTTAGATACAGCTCAAAATCATTTGAGGAATGGGCTAGCAGGGAAGAAATTCTTGGTTGTTCTGGATGATGTATGGAGCAGTAATCGTGAGCATTGGGAAAGTTTTCTAAATCCTTTTGAATGTGGAAGTGAGGTAGGCAAAATTCTTGTAACAACACGTCTTGATACAGTTGCTTCTGTGGTGAAATCTAAACATAATGAAGCTCACAATTTGAGTTTGTTGGATGAAGATCAATGCTGGTCAGTGTTTGCAAATCGAGCATGGGATCCTGCAGAATCCCGAGATCATTCAGCTTTAGAAGAAATTGGTAGAAAAATTGTTGAAAAATGTAAAGGATTACCTTTGGCAGCTCAAACAGTTGGAGGGTTATTGAGAGGGAAAGATAATGAAAAGGATTGGAATGATGTTTTGAATAGTGAATTCTGGGAACTCTCTGAGGAGGATAGCGTGATTCTTCCTGCATTGCGAATCAGTTATTTCCACCTTCCTTCGTATTTAAAGCGTTGCTTTGTTTATTGTTCTTTGTATCCGAAGGACTTTGAATTTAATAGAGATGAATTGACATTATTGTGGATGGCAGAAGGTCTTTTGTTACAACCAAAGAGTGGAAACACTTTGGAAGAAATTGGTTGTGAATATTTTGATGATTTGGTTTCGAGATCATTTTTTCAACATTCCAACTCTGATGATAATACATTTGTGATGCACGACCTCATGCATGATTTAGCAACATTTTATGGTGGAAAGTTCTTTTCTAGAATCTTTGAACTCAAGAACACAGAAAAGCATGATACCAAAACTCACCACTTGTCATATGCTCTCAACATTGATAATGATTCGTTTATGAAGATCGCAGAAGTACGCGAAAGGTTAAAACATGCGAGGACATTGTTGCAAATTAATTCGGCTACATATGGTAGATTGTTTACGAGAGTAACTGTTCCCTGTCACTTACTAGAACAATTGAAGTGCTTACGAGTTTTGTCACTTCAATTCTTTTTAGCTGATGAAAACTTGTTGCATGGTTCAATTGGTGAATTGATCCATTTGCGTTATTTGGATCTTTCATATACATCCATCGCGGCATTGCCCGAATCGTTAAGTTGCTTTTACAATTTACAAACCTTGAAGTTGAGAGACTGTGATAAACTTAAAAAGCTTCCGTCCAACATGCAAAATCTTGTGAATTTGCGTCATCTTGATATTGAGGGCACTGGTTTAGGAGAGATGCCAAAAAAGATGAGCAGATTAAAAGATTTGCAATTTTTAAGTTGTTATATTGCGGGCAAACATGAAGAGAATGGGATTGAAGAATTGGGAGAGCTAACACATCTTCATGGGTCACTGCGGATTGAGAAACTAGAGAATGTTAAGAATAGTGGTGAAGCATCGAATGCAAGGATGGATGAAAAAATACAACTGAATACTTTATATTTGAGTTGGTCATCATTTGAAGAAAGTGAGGTTTGTGATTCCCACACTGAAAAAGATATACTTGAGAAATTACGTCCTCACAAAGACTTGAAGGAGCTATTCATCAGGGGTTACAGAGGTACCATGTTTCCGGATTGGGTAGGGCTGTCTTCGTACCACAAGATTACTAAGTTGGAGCTGAGGAGATGCGGGAATTGTTGGATGCTTCCTTCACTTGGACAGTTACCCGCTCTAACGAGATTGGAGATTTCAGGATTTGATATGGTGAAGAAGATTGGGGGATCATTCTATAAGGGTGATGGAACTCATCAGCATCAGGAGACACCCTTCCGATCCCTTAAATCTCTGGAATTTTATAATATGGGTTGGTGGGAGGAATGGGAGTCATATGAATATGATGATGATGATGATGCACCATTTCCGAAACTTGAGGAGCTCCGTATTTATAACTGTCCCAAGTTAAGAGGAGATTTGCCCACTTTCCTTCCGTCTTTGGAGGAGCTTTGGATTGAAGGATGCGAGGAGCTTGGTTGTTATCTGCCAAGAGCTCCCATGATACGCTCATTAAGAATACATGGCAAACAGGAAGCAAGAATGCGGGACCTACCACTTTCCATGTTGGAGAAACTAGCTATTAATGGAGAGCAGCAGGTGGAGTATGTGTTTGAGGCCATGACCCACACCCAACCAACCTCTCTCAGTTATTTACAGATCTCAAACTGCTCAACAGCCATATCATTTCCAGGGGATTCTTTGCCCCCTTCATTGAAAGAGCTGGCCATCCACGATTGCAAGAATTATTCCTGTCCCAAGAAACTCATTCCTCAACTTCTACCCTCAACTCATTTCTACTCACGTTCATACTCTTGTGAAGTAACAGATTTTTTGGCTCCAATTGGGAATTCAAAAAGAAATTTTGGATCAAGGAGACACATGGGCCAATTAGAATGCAGCAAGGAGTCTCCCAATGATGAGGATACAGCAACAATGTAA 3174 0.4004 MAAELVGGAFLSSFLNVLFDRLSDPEIVNMMRGKKVDQKLLQRLKTILNVVEAVLNDAEKKQITDSAVKRWLEDLQNAVYDADDLLDEVATKAATQKDPPGNFLSRFLNLQDREMVSRIEEIIARLEDIAKHKDILRLEKIAAKNMSGRIPSTSLVKKSDIFVGRDRERDTIVKLLLDDVNNGELSVIPIVGMGGIGKTTLAKLVYNDDMVQQTFNVKAWVCVGEEEFDVLKVTKAVIEKTCSPCYSNDLDTAQNHLRNGLAGKKFLVVLDDVWSSNREHWESFLNPFECGSEVGKILVTTRLDTVASVVKSKHNEAHNLSLLDEDQCWSVFANRAWDPAESRDHSALEEIGRKIVEKCKGLPLAAQTVGGLLRGKDNEKDWNDVLNSEFWELSEEDSVILPALRISYFHLPSYLKRCFVYCSLYPKDFEFNRDELTLLWMAEGLLLQPKSGNTLEEIGCEYFDDLVSRSFFQHSNSDDNTFVMHDLMHDLATFYGGKFFSRIFELKNTEKHDTKTHHLSYALNIDNDSFMKIAEVRERLKHARTLLQINSATYGRLFTRVTVPCHLLEQLKCLRVLSLQFFLADENLLHGSIGELIHLRYLDLSYTSIAALPESLSCFYNLQTLKLRDCDKLKKLPSNMQNLVNLRHLDIEGTGLGEMPKKMSRLKDLQFLSCYIAGKHEENGIEELGELTHLHGSLRIEKLENVKNSGEASNARMDEKIQLNTLYLSWSSFEESEVCDSHTEKDILEKLRPHKDLKELFIRGYRGTMFPDWVGLSSYHKITKLELRRCGNCWMLPSLGQLPALTRLEISGFDMVKKIGGSFYKGDGTHQHQETPFRSLKSLEFYNMGWWEEWESYEYDDDDDAPFPKLEELRIYNCPKLRGDLPTFLPSLEELWIEGCEELGCYLPRAPMIRSLRIHGKQEARMRDLPLSMLEKLAINGEQQVEYVFEAMTHTQPTSLSYLQISNCSTAISFPGDSLPPSLKELAIHDCKNYSCPKKLIPQLLPSTHFYSRSYSCEVTDFLAPIGNSKRNFGSRRHMGQLECSKESPNDEDTATM* 1058
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3100 1057 Coils Coil 41 61 - -
Amo12g3100 1057 Gene3D Ribonuclease Inhibitor 526 925 IPR032675 -
Amo12g3100 1057 PRINTS Disease resistance protein signature 260 274 - -
Amo12g3100 1057 PRINTS Disease resistance protein signature 594 610 - -
Amo12g3100 1057 PRINTS Disease resistance protein signature 187 202 - -
Amo12g3100 1057 PRINTS Disease resistance protein signature 359 373 - -
Amo12g3100 1057 Pfam NB-ARC domain 172 388 IPR002182 GO:0043531
Amo12g3100 1057 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 422 IPR027417 -
Amo12g3100 1057 MobiDBLite consensus disorder prediction 1037 1057 - -
Amo12g3100 1057 Pfam Rx N-terminal domain 10 102 IPR041118 -
Amo12g3100 1057 SUPERFAMILY L domain-like 483 995 - -
Amo12g3100 1057 PANTHER OS05G0414200 PROTEIN 34 973 - -
Amo12g3100 1057 PANTHER DISEASE RESISTANCE PROTEIN RP 34 973 IPR044974 GO:0006952
Amo12g3100 1057 CDD RX-CC_like 41 131 IPR038005 -
Amo12g3100 1057 Gene3D - 407 493 IPR036388 -
Amo12g3100 1057 Gene3D - 141 317 IPR027417 -
Amo12g3100 1057 Gene3D - 15 132 - -
Amo12g3100 1057 Gene3D - 322 406 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3100 Amo-Chr12 119394786 119398636 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g3100 184 660 WRKY Transcription Factor Family AT5G45050 22.662 3.20e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g3100 - - adu:110278296 1489.17