Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3098 ATGGCTGCTGAACTTGTTGGAGGAGCTTTCCTCTCTTCTTTTCTCAATGTCCTTTTCGACAGGCTGTCTGATCCTGATTTCATCAACATGATGAGAGGAAAGAAGGTTGACCAGAAGCTGCTTCAAAGGTTGAAGACCATTCTGAATGTGGTCGAAGCTGTGCTGAATGATGCTGAGAAGAAACAGATCACTGACCCTGCTGTCAAGAGATGGCTCGAAGATCTCCAAGATGCTGTATATGATGCTGATGACTTGTTGGATGAAGTCGCCACCAAAGCTGCCACTCAGAAGGATCCACCAGGTAACTTACTGTCTCGCTTTCTCAATTCGCAAGATAGGGAGATGGTTACTAGGATTGAAGAAATCATTGCTAGACTAGAAGATATTGCAAAACACAAAGATATCCTTCGCCTAGAAAAGATTGCAGCCAAGAACATGTCTGGGAGGATTCCATCAACCTCACTTGTTAAAAAATCTGATATATTTGTTGGAAGGCACAAAGAGAGAGATACCATAGTGAAATTGTTGTTAGATGATGCTAACAATGGTGAGCTGTCTGTGATTCCCATCGTGGGCATGGGTGGGATAGGAAAAACTACTTTGGCTAAATTGGTTTATAATGATGACATAGTGCAACAAAAGTTTCATGTCAAGGCATGGGTTTGTGTTGGTGAGGAGGAATTTGATGTTCTGAAGGTCACAAAGGCGGTGATAGAGAAAACTTGCAGTGCTTGTTACTCAAATGATTTAGATACAGCTCAAAATCATTTGAAGAATGGGCTAGTGGGGAAGAACTTCTTGGTTGTTCTGGATGATGTCTGGAGCAGTAATCGTGAGTGTTGGGAAAGTTTTCTAACACCTTCTGAATGTGGAAGTGAGGGAGGCAAGATTCTTGTAACAACACGTCTTGATACAGTTGCTTCTGTGGTGAAAACTAAACATAATGAAGCTCACAATTTGAATTTGTTGAATGAAGAACAATGCTGGTCAGTGTTTGTAAATCGTGCATGGGATCCTTTGGAATCTCGAGATCGTTCAACTTTAGAAGAAATTGGTAGAAAAATTGTTAAAAAATGTAAAGGATTACCTTTAGCAGCTCAGACCCTTGGAGGATTATTGAGAGGGAAAGATAATGAAAAAGACTGGATTGATGTTTTGAAGAGTGAATTCTGGGAACTCTCTGAGGAGGATAGTGGGATTCTTCCTGCATTGAGAATCAGTTATTACCATCTTCCTTCGTATTTAAAACGTTGCTTTGTTTATTGTTGTTTGTATCCGAAGGACTTTGAATTTTATAGAGATGAATTGACATTATTGTGGATGGCAGAAGGTCTTTTGCTACAACCAAAGAGTGGAATCACTTTGGAAGAAATTGGTTATGAGTATTTTGATGATTTGGTTTCGAGATCATTTTTTCAACATTCTAACACTTATGTGAATTCATTTGTGATGCACGATCTCATGCATGATTTAGCAACGTTCTATGGTGGCAAGTTCTTTTCTAGAATCCTTGAATTCAAGAATGCAGCAAAGCATGATGCCAAAACTCGCCATTTTTCATGTGCTTGCAAGAATGAAGATGATTTGCTTATGAAGATCACAGAAGCATGCGACAAGTTAAAACATGCGAGGACATTGTTGCAAATTTTTAATAAATATGGTGTATTCTCAGCGGGAGATAGAGTAGCCGTATCTTGTGACTTACTAGAACAATTGAAGTGCTTACGAGTTTTGTCATTTAATTTTTTTTCAGATGATGAAAACTTGATGCATGGTTCTATTGCCAAATTGATCCATTTGCGTTATTTGGATCTTTCATACACATCCATCGTGACTTTGCCTGAGTCTTTAAGTTGCTTGTACAATTTACAAACCTTGAAGTTGAGAAGCTGTGTAAAACTTAAAAAGCTTCCGTCCAACATGCAAAATCTTGTGAATTTGCGTCATCTCGATAGTGGCGGCACAGATTTAGAAGAGATGCCAAAAAAGATGAGCAAATTAAAAGATTTGCAATTTTTAAGTGACTATATTGTGGGGAAACATGAAGAGAATGGGATTGGAGAACTGGGAGGACTAACACATCTTCATGGGTCATTGTGGATTCCGAAACTAGAGAATGTTAAGAATGGTGGTGAAGCATCGAGTGCAAGAATGGATGAAAAAATACACCTGAATGCTTTATATTTGAGTTGGTCGTCATTTGAAGAAAGTGAGGTTTGTGATTCTCAAAGTGAAAAAGATGTACTTGAGAAATTACGTCCTCACAAAGACTTGAAGGAGCTATTCATCTGGCGTTACAGAGGTACCATGTTTCCGGATTGGGTAGGGCAGTCTTCGTACCACAAGATGACTTGGTTGGAGCTGTGGGGATGCAGGAATTGCTGGGTGGTTCCTTCACTTGGACAGTTACCCTCTCTGGAGAGGCTGGTCATTGCAGGGTTCAACAAGGTGAAGAAGATTGGTGGGTCATTCTATAAGGGTGATGCAACTCATCAGCAGCATCAGGAGACACTCTTCCGATCCCTTAAATATCTCAGTATTAAAGGAATGCCTTGCTTGGAGGAATGGGAGTCATATGAATGTGATGATGATGATGATGCACCATTTCCGAAACTTGAGATCTCTCAATATGGGACTGTCCTAAGTTAA 2649 0.3975 MAAELVGGAFLSSFLNVLFDRLSDPDFINMMRGKKVDQKLLQRLKTILNVVEAVLNDAEKKQITDPAVKRWLEDLQDAVYDADDLLDEVATKAATQKDPPGNLLSRFLNSQDREMVTRIEEIIARLEDIAKHKDILRLEKIAAKNMSGRIPSTSLVKKSDIFVGRHKERDTIVKLLLDDANNGELSVIPIVGMGGIGKTTLAKLVYNDDIVQQKFHVKAWVCVGEEEFDVLKVTKAVIEKTCSACYSNDLDTAQNHLKNGLVGKNFLVVLDDVWSSNRECWESFLTPSECGSEGGKILVTTRLDTVASVVKTKHNEAHNLNLLNEEQCWSVFVNRAWDPLESRDRSTLEEIGRKIVKKCKGLPLAAQTLGGLLRGKDNEKDWIDVLKSEFWELSEEDSGILPALRISYYHLPSYLKRCFVYCCLYPKDFEFYRDELTLLWMAEGLLLQPKSGITLEEIGYEYFDDLVSRSFFQHSNTYVNSFVMHDLMHDLATFYGGKFFSRILEFKNAAKHDAKTRHFSCACKNEDDLLMKITEACDKLKHARTLLQIFNKYGVFSAGDRVAVSCDLLEQLKCLRVLSFNFFSDDENLMHGSIAKLIHLRYLDLSYTSIVTLPESLSCLYNLQTLKLRSCVKLKKLPSNMQNLVNLRHLDSGGTDLEEMPKKMSKLKDLQFLSDYIVGKHEENGIGELGGLTHLHGSLWIPKLENVKNGGEASSARMDEKIHLNALYLSWSSFEESEVCDSQSEKDVLEKLRPHKDLKELFIWRYRGTMFPDWVGQSSYHKMTWLELWGCRNCWVVPSLGQLPSLERLVIAGFNKVKKIGGSFYKGDATHQQHQETLFRSLKYLSIKGMPCLEEWESYECDDDDDAPFPKLEISQYGTVLS* 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3098 882 PRINTS Disease resistance protein signature 359 373 - -
Amo12g3098 882 PRINTS Disease resistance protein signature 187 202 - -
Amo12g3098 882 PRINTS Disease resistance protein signature 260 274 - -
Amo12g3098 882 PRINTS Disease resistance protein signature 595 611 - -
Amo12g3098 882 Coils Coil 41 61 - -
Amo12g3098 882 Gene3D - 407 493 IPR036388 -
Amo12g3098 882 PANTHER DISEASE RESISTANCE PROTEIN RP 33 862 IPR044974 GO:0006952
Amo12g3098 882 Gene3D Ribonuclease Inhibitor 527 862 IPR032675 -
Amo12g3098 882 SUPERFAMILY L domain-like 483 852 - -
Amo12g3098 882 Gene3D - 141 317 IPR027417 -
Amo12g3098 882 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 422 IPR027417 -
Amo12g3098 882 Gene3D - 322 406 IPR042197 -
Amo12g3098 882 CDD RX-CC_like 41 131 IPR038005 -
Amo12g3098 882 PANTHER OS05G0414200 PROTEIN 33 862 - -
Amo12g3098 882 Pfam Rx N-terminal domain 10 102 IPR041118 -
Amo12g3098 882 Pfam NB-ARC domain 170 387 IPR002182 GO:0043531
Amo12g3098 882 Gene3D - 17 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3098 Amo-Chr12 119358159 119360807 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g3098 184 492 WRKY Transcription Factor Family AT5G45050 26.625 5.79e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g3098 - - adu:110278296 1374.76