Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3080 ATGGCTGCAATGAAACTCCATGGAAACCCTATGTCACCAGCCTCCATGCGAGTTGCTGCTGTCTTGTATGAGAAAGAGCTTGATTTTGAGTTTGTTACTATTGACATGAGGAATAGTGAACATAAAAAGGAGCCTTTTCTTTCTCTCAATCCATTTGGTCAAGTTCCAGCATTTGAAGATGGAGATTTGAAACTCTTCGAATCAAGGGCAATTACAAAATACATTGCACATGAATATGCTGATAAGGGGACTCAGCTAATAGTAACCAATGATTCAAAGAAGATGGCTATAATCACTCTATGGCTTGAAGTTGAAGCTCAACAATATGATCAAGCAGCTTCAAAACTTCTATGGGAGCTTCATTTTAAGCCACTCTTTGGCATCCCAACAGACCCAAAAGTTGTTGAAGAGAATGAATCAAAGCTTAGTAGTGTTCTTGGAATATATGAGAAGAGGCTCTCTGAGACAAAGTACTTGGCTGGTGAATGTTTCACTTTGGCTGATCTTCATCACCTTCCAACCCTTCATTTCTTGATGTTAACGCAGGTGAAGAAGCTGTTTGAGCCTCTGCCACGTGTCAGTGCTTGGGTGGCTGATATTACGGCTAGGCCAGCTTGGTCTAAGGTCACTGCCATGCTCAATTAA 645 0.414 MAAMKLHGNPMSPASMRVAAVLYEKELDFEFVTIDMRNSEHKKEPFLSLNPFGQVPAFEDGDLKLFESRAITKYIAHEYADKGTQLIVTNDSKKMAIITLWLEVEAQQYDQAASKLLWELHFKPLFGIPTDPKVVEENESKLSSVLGIYEKRLSETKYLAGECFTLADLHHLPTLHFLMLTQVKKLFEPLPRVSAWVADITARPAWSKVTAMLN* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3080 214 CDD GST_C_Phi 93 209 IPR034347 -
Amo12g3080 214 SFLD Main.5: Phi-like 1 212 - -
Amo12g3080 214 CDD GST_N_Phi 3 77 - -
Amo12g3080 214 PANTHER GLUTATHIONE S-TRANSFERASE RHO 3 213 - -
Amo12g3080 214 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 214 IPR010987 -
Amo12g3080 214 SUPERFAMILY Thioredoxin-like 1 83 IPR036249 -
Amo12g3080 214 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 83 IPR004045 -
Amo12g3080 214 SUPERFAMILY GST C-terminal domain-like 91 209 IPR036282 -
Amo12g3080 214 Pfam Glutathione S-transferase, N-terminal domain 3 76 IPR004045 -
Amo12g3080 214 PANTHER GLUTATHIONE S-TRANSFERASE F6-RELATED 3 213 - -
Amo12g3080 214 SFLD Glutathione Transferase (cytosolic) 1 212 IPR040079 -
Amo12g3080 214 Pfam Glutathione S-transferase, C-terminal domain 114 204 IPR004046 -
Amo12g3080 214 Gene3D - 90 214 - -
Amo12g3080 214 Gene3D Glutaredoxin 1 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3080 Amo-Chr12 119120716 119122755 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g3080 1 209 Glutathione S-transferase Gene Family AT1G02930 56.459 4.74e-86 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g3080 K00799 - gmx:100799868 327.405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g3080 12 119120716 119122755 Amo12g3080 12 119120716 119122755 ECH