Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3025 ATGGGTTCGAAACCGTGGCTCTACCCTGCTCCTACGTATCGGCCATTAGAGACGTTTTGGGACACTGATGAAGACGCGCCGGGGCCACGATGCGGCCACACACTCACCGCCGTCGCCGCCACCAAATCTCACGGACCAAGGCTTATCCTTTTCGGCGGCGCCACCGCCATCGAGGGAGGATCTTCCTCAGCTCCCGGAATCAGGTTAGCTGGAGTTACCAATTCGGTTCATTCGTATGATGTTCTAACGAGAAAATGGAGTAGTCTTAAACCTGCCGGAGAGCCTCCATCCCCTCGGGCAGCTCATGCTGCTGCCGCCGTTGGTACTATGGTTGTTTTTCAGGGTGGCATAGGTCCTGCTGGGCATTCTACTGATGATCTCTATGTGCTTGACATGACCAATGATAAATTCAAATGGCACAGAGTTGTTGTACAAGGGCAAGGACCTGGACCTCGCTATGGCCATGTAATGGATTTGGTTGCTCAGAGATATCTTGTTACTGTCAGCGGAAATGATGGGAAAAGAGTTGTTTCTGATGCTTGGGCTTTGGATACGGCACAAAAACCTTACATGTGGCAGAAGCTGAACCCAGAAGGTGATAGACCTTCTGCTAGAATGTATGCTACTGCTAGTGCTCGTTCAGATGGAATGTTTTTGCTTTGTGGTGGAAGAGACTCTTCTGGAGCGCCACTAGCAGATGCATATGGACTGCTCATGCATAGGAACGGCCAGTGGGAATGGACACTCGCACCTGGAGTTTCCCCTTCACCAAGGTATCAACATGCTGCGGTTTTTGTTGGTGCACGATTGCACGTTACAGGAGGTGTTCTCAAAGGTGGACGGGCTGTAGAAGGTGAAGCAGCCATTGCAGTACTCGACACAGCGGCTGGGGTTTGGTTGGATAGAAATGGCATTGTGGCCTCGTCACGCCCAAACAAAGGTCATGATTATGACCCTCCTTTGGATCTTTTGCGTCGTTGTCGGCATGCAGCAGCGGCCGTTGGTGTTCGTATATACATCTATGGTGGTCTTAGAGGAGATTCACTACTAGATGATTTATTAGTGGCAGAAAATTCACCCTTTCAATCTGACACTAATTCTCCTGTGTTAACATCTGAGAGAACTTCACCTATTTCAAGCCCCAAATTCGGCCAGTCTAATGTAAATTATAGCGTAACAACACCAAGTTCAGATTCTGGGCCAGATGTTCCCTCATCTGGTGGCTTAGGAATGGATAGAAACTCCATGGAGAAACTTAGGGAAGCATCAGCTGCAGAAGCTGAGGTAGCGAATGCAGTCTGGCAAGCTGTGCAGGCATCAAATAGTCCTGCTGAAGAAACATCGCTATCAGATGACAACTCACAAGCTGCAGAAACAGTTTCAGATGGCAGTGATACAGAAGGCGATGTTCGCCTTCATCCCAGAGCGGTTGTAGTTGCTAAAGAGGCCGTAGGTAACCTAGGTGGAATGGTGAGACAGCTATCGCTGGATCAATTTGAAAATGAAAGCAGACGCATGGTTCCTGTAAATAATGATACACCATATCCTACCAAAAAATTCACTAGGCAGAAATCCCCTCAGGGATTACATAAAAAGATAATTTCGAATTTGCTTAGGCCACGCAACTGGAAAGCACCTGCAAACAGACGATTCTTCTTAGATTCTTATGAAGTCGGTGAATTATGCTATGCTGCCGAGCAAATATTTATGCAAGAACCAACTGTTCTTCAGTTAAAAGCTCCTATCAAAGTATTTGGTGATCTTCATGGTCAGTTTGGTGATTTGATGCGACTATTTGATGAATATGGATTTCCTTCAACTGCGGGAGACATCACGTATATTGACTACCTGTTTTTGGGAGATTATGTTGATAGAGGACAGCACAGCTTGGAAACCATTACCTTGCTGCTTGCGCTTAAGATTGAGTATCCTGAGAATGTTCACCTGATACGTGGTAACCATGAAGCTGCTGACATAAATGCACTATTTGGTTTTCGTATTGAGTGTATTGAAAGGATGGGGGAAAATGATGGAATCTGGGCATGGACGAGGTTCAATCAACTTTTCAACTATCTTCCACTTGCAGCTCTTATTGAAAAGAAAATTATCTGTATGCATGGTGGCATTGGAAGGTCTATCAATTCTGTAGAACAGATAGAGAAGCTTGAAAGGCCCATAACAATGGATGCAGGATCTATTATTTTGATGGACCTTCTGTGGTCCGATCCTACAGAAAATGATAGCGTAGAGGGTTTGAGACCAAATGCCAGAGGACCAGGCCTTGTCACTTTTGGGCCTGACCGTGTAACTGAGTTCTGCAAGAAAAACAAACTACAGCTAATTATAAGGGCCCATGAATGCGTGATGGATGGCTTTGAACGATTCGCACAGGGACAATTGATTACGCTTTTTTCTGCAACTAACTATTGTGGAACGGCAAACAATGCTGGTGCCATACTGGTCGTTGGCCGGGGCTTGGTAGTGGTTCCAAAATTGATCCACCCCCTACCGCCACCCCTTCAGTCTCCAGAGACATCTCCTGAGCGTGTCATGGATGAAACATGGATGCAGGAACTTAATATTCAGAGGCCACCAACTCCGACACGTGGTCGACCACAGCCAGACCTTGACCGCGGCTCGCTAGCATACATATGA 2655 0.4674 MGSKPWLYPAPTYRPLETFWDTDEDAPGPRCGHTLTAVAATKSHGPRLILFGGATAIEGGSSSAPGIRLAGVTNSVHSYDVLTRKWSSLKPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDMTNDKFKWHRVVVQGQGPGPRYGHVMDLVAQRYLVTVSGNDGKRVVSDAWALDTAQKPYMWQKLNPEGDRPSARMYATASARSDGMFLLCGGRDSSGAPLADAYGLLMHRNGQWEWTLAPGVSPSPRYQHAAVFVGARLHVTGGVLKGGRAVEGEAAIAVLDTAAGVWLDRNGIVASSRPNKGHDYDPPLDLLRRCRHAAAAVGVRIYIYGGLRGDSLLDDLLVAENSPFQSDTNSPVLTSERTSPISSPKFGQSNVNYSVTTPSSDSGPDVPSSGGLGMDRNSMEKLREASAAEAEVANAVWQAVQASNSPAEETSLSDDNSQAAETVSDGSDTEGDVRLHPRAVVVAKEAVGNLGGMVRQLSLDQFENESRRMVPVNNDTPYPTKKFTRQKSPQGLHKKIISNLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLKAPIKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRIECIERMGENDGIWAWTRFNQLFNYLPLAALIEKKIICMHGGIGRSINSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVTEFCKKNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPLPPPLQSPETSPERVMDETWMQELNIQRPPTPTRGRPQPDLDRGSLAYI* 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3025 884 Gene3D - 509 854 IPR029052 -
Amo12g3025 884 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 884 - -
Amo12g3025 884 Pfam Calcineurin-like phosphoesterase 581 788 IPR004843 GO:0016787
Amo12g3025 884 SUPERFAMILY Kelch motif 70 356 IPR015915 GO:0005515
Amo12g3025 884 MobiDBLite consensus disorder prediction 438 469 - -
Amo12g3025 884 MobiDBLite consensus disorder prediction 859 884 - -
Amo12g3025 884 Gene3D - 194 368 IPR015915 GO:0005515
Amo12g3025 884 MobiDBLite consensus disorder prediction 361 413 - -
Amo12g3025 884 MobiDBLite consensus disorder prediction 438 462 - -
Amo12g3025 884 Pfam Serine-threonine protein phosphatase N-terminal domain 532 579 IPR031675 -
Amo12g3025 884 PRINTS Serine/threonine phosphatase family signature 581 608 IPR006186 GO:0016787
Amo12g3025 884 PRINTS Serine/threonine phosphatase family signature 616 643 IPR006186 GO:0016787
Amo12g3025 884 PRINTS Serine/threonine phosphatase family signature 649 673 IPR006186 GO:0016787
Amo12g3025 884 PRINTS Serine/threonine phosphatase family signature 687 713 IPR006186 GO:0016787
Amo12g3025 884 PRINTS Serine/threonine phosphatase family signature 717 744 IPR006186 GO:0016787
Amo12g3025 884 PRINTS Serine/threonine phosphatase family signature 777 797 IPR006186 GO:0016787
Amo12g3025 884 PRINTS Serine/threonine phosphatase family signature 799 815 IPR006186 GO:0016787
Amo12g3025 884 PIRSF STPPP_BSU1 1 884 IPR012391 GO:0004721|GO:0009742
Amo12g3025 884 Gene3D - 8 193 IPR015915 GO:0005515
Amo12g3025 884 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 884 - -
Amo12g3025 884 SUPERFAMILY Metallo-dependent phosphatases 535 845 IPR029052 -
Amo12g3025 884 Pfam Kelch motif 96 133 - -
Amo12g3025 884 CDD MPP_Bsu1_C 533 835 IPR041758 -
Amo12g3025 884 MobiDBLite consensus disorder prediction 361 403 - -
Amo12g3025 884 SMART pp2a_7 553 839 IPR006186 GO:0016787
Amo12g3025 884 ProSitePatterns Serine/threonine specific protein phosphatases signature. 650 655 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3025 Amo-Chr12 117896013 117903965 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g3025 561 780 Calmodulin-binding Proteins AT5G63870 30.469 8.61e-28 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g3025 K01090 - gmx:100805538 1635.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g3025 12 117896013 117903965 Amo12g3025 12 117896013 117903965 ECH