Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2994 ATGGCTTCTTCTTCTTCTTCTTCTTTTTTATTGGATGCTCCCAGAATCAAACATGATGTCTTCATCAGCTTCAGAGGAGAAGATATCCGCACTTCTTTTCTTAGCCATTTGAGAAAAGAGTTGCATCGTTACCATATCGATTTCTTCGTGGACGACGAAAAACTGCACCCTGGAGATGATATTTCATCCACGCTTATTCAAGCCATTGAAGAGTCTTCTATTTCCTTGGTCATCTTTTCGGAAAACTATGCTTCTTCCACTTGGTGCTTGAATGAACTTGTGAAAGTAATTCAATGCATGAAACAAGATCGAAGGATTGTGATACCTGTTTTCTACAAAGTTGTTCCCTCTGATGTGCGGCATCAGAATAATTCCTTTAAGGAGGCTTTTGATAAACACCAACACAGATTGAAGGGAAATATGATGAAGGTGCAAAGTTGGAGATTTGCTTTAAAGGAAGCTTCTAATTTATCTGGATTTCATTATCCATCAAAATATCAGGATGAATCTAAATTCATTGAAGAAATTGTGAATGATATTTCAGAGAAATTGTCATATATTTTCTCAATAGAATCCAAATGTCTTGTTGGAATTGATGATAATTTTACAAGTATTGAATCATTATTGGAAATTGAATCCGTCAAGGTCCGAATCATAGGAATTTGGGGGATGGGAGGAATAGGTAAAACTACTATTGCTGAATTCTTATTTGACAAATATTCTTCCCAATATGAAGGCAGTTGTATGTTGAAAAATGTAAGAGAAGAATCACAAAAGTTTGGTGTGCCTTATTTATGTGAGAAACTTATTTCTGAGTTATTAGCCGGAGAAAGCCTTGTTTTGAAAGGATCATCCAAAGCAAGATCCGCTTTTATCCAGAGAAAGTTGAGTCGAAAAAAAGTTTTCATAGTGCTTGATGATATGGATACATTAGAACAGTTTGAACATCTTGCTACAAAATGGTTGGGACCAGGTAGTAGGATCATTATAACTACCAGAGACAAGCATGTCCTTAGAAAAGTTCATGGAATATATGAAGTCCAGGGCTTGAGCTTTAAAAATTCCCTTAAGCTATTTTGCTTGAATGCTTTTGACAAAGTCTATCCTGAAACTGGATATGAAGAGTTTTCTGAAATAGCAGTCAATTATGCAAATGGCGTCCCATTGGCTTTACGAGTTTTGGGTTCTTTTTTATACTCTAAAACCATAGAAGAATGGGAAAGTGCTTTGGGAAAACTCAAGATTTATCCTAATATAGACATTTTTAATGTCTTAAAATTGAGTTATGATGGGCTAGATGATTTAGAGAAGGACATATTCCTTGACATTGCATTTTTTTTCAAAGGAGAAGATAAGGATGTTGTCATATCATTTCTAGAATCCTGTGGTTTTTTTCCTGCTATTGGCATAGGCAACCTTTCACGTAAAGCTCTCATAACTATTTCAAATCGTAATACAATAGAAATGCATGATTTGATAGGGCAAATGGGTCGAGAAATAGTTCGTCAAGAATCAATTAAAGACCCAGGAAGACGTAGCCGCTTAAGTAACCATGAGGATGTCTACAATGTACTGAACAATAATAAGGGAACAGACTCAGTTGAAGGCATTATGTTGGACTTGTCTCAAATTAAAAGAGATCTACATTTAGATGCCGACACTTTTAAAAGGATGCCTAATATAAGGTTTCTTAAATTTTATGATTCATGGAGGCAAAAAGAATCAGCAAATGTGCACGTTTCTTCAACTTTTGATTCATTTCCAAAGGAACTAAGATACTTGGAGTGGAGTGGCTGCCCTGTGAAGTCTCTTCCGCCAAATATTTGTGCTGAGAAGCTTGTTAAGCTTTCTATGCCAGATAGCCAAGTTTCTAAACTTTGGGATGGAGTTCAGGATCTTGTAAATTTAAAGAAGATTAACCTTAGGGGATGCAAGCAGCTAGTGGAGCTTCCAGATTTTTCTCGTGCATCAAACCTTGAAGAAATATGCCTCATTGAATGCGTAAGGTTGTTTGAACTTCATCCATCCATTTTATCCATCCACAAGCTCGAAAATTTAAGTGTTTGGGGTTGCAAAGCACTAAAGAGTCTTAAAAGCAATATCCATTTAAAATCTCTTAAAAAACTCGATGTTCGTTGCTGCTCAAGCATGAAGGAATTTTCAGTGTCATCAGAGGAATTAATGAGCTTGAATTTCAATGGGACAATAATTGAAATGTTGCAATCATCAGTTGGCCGTCTCAGCAAACTTGTAGAGTGTGATCTGAGTAATGTGAGACTTGAAACTCTTCCAAACGAGCTGTGTCTCTTAGTATCCCTTGAGAAACTAAATCTTGAAGGATGCAAACAGTTGATTGAACTCCCTCACAATATGAAAGCCCTGTCGCGGTTACAGGATCTCAACATAACAGGTTGCTGCAGCCTTGGATCTTTACCGGAGCTTCCACCGTCTCTTATACATTTATCTGCCACAAACTGCAGATCGCTGGAGAAATTGTTCAATATAAAGACACTATTCAGTTTAAATCTAAAATCCATCTCATTTGAAAACTGCGAGAGGCTTGATGAGCATTCATTCTTAGAATATGTGCATCTTACAATGATGGGAGTAGCAATTAGAGATATATTGGCTGACATGCTGCAATACAAAATTGAACCTCATGCTGATGATGACGATACTACGTTCTTCCCTGAATCCAACAATCAGGTTTTTTATCCCGGAAGCAAGGTTCCACCATGGTTCATATATCAGACAAGAGAGGCTTCAGTAACTATTGACCTTCCTGCAGATCAACCATTGAACCAGCTAGTTGGTTTCATTCTCTGTTGTGTTGTTTATCATATTCCTTCCCATATAGAGTCTCCCACCACTAGTCGTGCTTTTTCTTCAAAACGGCCTCCCATAATCCGTTGTCAATACAGTGGTTTTGGGTATAGCAAACAGTTTGCTAAAACGAGTCGATGGAACTCAGATCATGTTTGCATATGGTTTCATGCTGCTCATAATCGTCAATGGCATGGCAACAATGCCACATTTAAATTCAAAGCTGAAACTCTATCTGAATTCAAAGTTGAAACTCGATGTGAAGATTATACGCCATGGAATAAACGTATCCCATATGTATGGAGGGTCATAGAGGAATGGGAGGTCATAGGGTGTGGGGTTTACCCAATATATGCCTCAGACATCCTAGATGTCTTTCAAAAAGTGGATCCTCAGTTCCAGTTTTTTAAAGATAGAAGCAGTTGGGAACGGAAATCTGGGATTGGGAGGACTGATCTTCAATCGGTTTACACTCTCGAGGAAGTCAAGACAAGGATGATTCACAAGATGGAAGCAGACCAAAAAAGGTTCTCATCGGTTTCCAGGATTTGTCGAATTTCTAATAACAGGACCAGGATGTCAATGGTTTCCTTAAAACCAAAAGAAGTATCTCAAAGCTTGAATGAAGAAGAAAACCAAGTCGATCAGAGAAACAGTTCTCCATTACCTTGGCGTTTGGTAACAAAGATGTTTAAGTGCTTGTATGGGTGCTGTTAA 3540 0.3766 MASSSSSSFLLDAPRIKHDVFISFRGEDIRTSFLSHLRKELHRYHIDFFVDDEKLHPGDDISSTLIQAIEESSISLVIFSENYASSTWCLNELVKVIQCMKQDRRIVIPVFYKVVPSDVRHQNNSFKEAFDKHQHRLKGNMMKVQSWRFALKEASNLSGFHYPSKYQDESKFIEEIVNDISEKLSYIFSIESKCLVGIDDNFTSIESLLEIESVKVRIIGIWGMGGIGKTTIAEFLFDKYSSQYEGSCMLKNVREESQKFGVPYLCEKLISELLAGESLVLKGSSKARSAFIQRKLSRKKVFIVLDDMDTLEQFEHLATKWLGPGSRIIITTRDKHVLRKVHGIYEVQGLSFKNSLKLFCLNAFDKVYPETGYEEFSEIAVNYANGVPLALRVLGSFLYSKTIEEWESALGKLKIYPNIDIFNVLKLSYDGLDDLEKDIFLDIAFFFKGEDKDVVISFLESCGFFPAIGIGNLSRKALITISNRNTIEMHDLIGQMGREIVRQESIKDPGRRSRLSNHEDVYNVLNNNKGTDSVEGIMLDLSQIKRDLHLDADTFKRMPNIRFLKFYDSWRQKESANVHVSSTFDSFPKELRYLEWSGCPVKSLPPNICAEKLVKLSMPDSQVSKLWDGVQDLVNLKKINLRGCKQLVELPDFSRASNLEEICLIECVRLFELHPSILSIHKLENLSVWGCKALKSLKSNIHLKSLKKLDVRCCSSMKEFSVSSEELMSLNFNGTIIEMLQSSVGRLSKLVECDLSNVRLETLPNELCLLVSLEKLNLEGCKQLIELPHNMKALSRLQDLNITGCCSLGSLPELPPSLIHLSATNCRSLEKLFNIKTLFSLNLKSISFENCERLDEHSFLEYVHLTMMGVAIRDILADMLQYKIEPHADDDDTTFFPESNNQVFYPGSKVPPWFIYQTREASVTIDLPADQPLNQLVGFILCCVVYHIPSHIESPTTSRAFSSKRPPIIRCQYSGFGYSKQFAKTSRWNSDHVCIWFHAAHNRQWHGNNATFKFKAETLSEFKVETRCEDYTPWNKRIPYVWRVIEEWEVIGCGVYPIYASDILDVFQKVDPQFQFFKDRSSWERKSGIGRTDLQSVYTLEEVKTRMIHKMEADQKRFSSVSRICRISNNRTRMSMVSLKPKEVSQSLNEEENQVDQRNSSPLPWRLVTKMFKCLYGCC* 1180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2994 1179 Gene3D - 188 346 IPR027417 -
Amo12g2994 1179 SUPERFAMILY "Winged helix" DNA-binding domain 420 525 IPR036390 -
Amo12g2994 1179 Pfam C-JID domain 905 1062 IPR045344 -
Amo12g2994 1179 Pfam Leucine Rich Repeat 612 631 IPR011713 -
Amo12g2994 1179 Pfam TIR domain 17 190 IPR000157 GO:0007165
Amo12g2994 1179 PRINTS Disease resistance protein signature 701 717 - -
Amo12g2994 1179 PRINTS Disease resistance protein signature 384 398 - -
Amo12g2994 1179 PRINTS Disease resistance protein signature 218 233 - -
Amo12g2994 1179 PRINTS Disease resistance protein signature 295 309 - -
Amo12g2994 1179 Gene3D - 13 187 IPR035897 -
Amo12g2994 1179 Gene3D - 350 433 IPR042197 -
Amo12g2994 1179 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 160 IPR035897 -
Amo12g2994 1179 Gene3D Ribonuclease Inhibitor 719 881 IPR032675 -
Amo12g2994 1179 Pfam NB-ARC domain 205 414 IPR002182 GO:0043531
Amo12g2994 1179 Gene3D Ribonuclease Inhibitor 525 718 IPR032675 -
Amo12g2994 1179 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 1026 IPR044974 GO:0006952
Amo12g2994 1179 SUPERFAMILY L domain-like 549 860 - -
Amo12g2994 1179 ProSiteProfiles TIR domain profile. 16 184 IPR000157 GO:0007165
Amo12g2994 1179 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 12 1026 - -
Amo12g2994 1179 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 443 IPR027417 -
Amo12g2994 1179 SMART till_3 17 157 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2994 Amo-Chr12 117408632 117412849 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2994 18 823 WRKY Transcription Factor Family AT4G12020 34.634 4.22e-113 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2994 - - ahf:112728432 2343.15