Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2992 ATGAGTGGGGAAATGCAACTAAAGAGGTTCAACACAATGGAGAGAAGGCCTCTTAGAACCCTAAGGGACCTATTGAGTGAGAATAATAATAATAGTTATTATTGTTCAAACTCATCATCATCATGTTCTTCAAGTGGATTCAAATCACTACCAAGAAGGATTAATCAAACAAATAAAAGTAGCATGCAAACCCAAATGAAGAATCCCTCAACCTTTCAAACCCTAATAAACACATTCAAGACCATCTTAGTGAAGAAATCACCCTCTATGATCTTGCCACGTAGCATCTCACGCAAGCTTTCGTCATCAAGAAGGTCAAGCAGATTAAGGAACCAAACATTTTGCAAAGGAAGCACTGATGAAGTTGAAATCAGCACCGTCAAGATCAAGGACATCATACGGTGGAGATCTTTCAAGGATGTTACTGTGGAGGAGGAGCACAATAACAAATATCCACTGTCACAATCTCAACCGTTGGATTTTCACCGTTGCATGATGATGGGGTCCACTACTACAACAACTACGACAACCACTACCACGTGTAGTAGCAGCAATGGGTCTAGCTGGAATGAGAGTGATTTTACCTCAATAGCCTCAGGGTACTCGTCTTCATGGGAACCACAAAACGACGACGTTTTGATAAGTGAGAAATTTCCACTTTCACCCCTTGATGTTGTTGTCGGCAAGGATTTGGTGCAACAAAAAACAAATATGGCGGGGCCCAAGGAAATTTCAAGTTTCCAAGAAGATGAACAACATAGTCCAATTTCAGTTCTTCAAATTGGAAAAGATGAATTCCCACACTATAATCAAAGCCTTGCCGATATTGAAAGAAGAAAACAAAAGTTCATGGACACCTTTCAAATAATTGAGAGCCTTGCAAAATTTGACCTACCAAACTTAGACCAATATATCATATTGGATGAGAACTTTAGCTATAATGAAGATTGTGATAATTATGATTATGAAGTTGAAGAACAAGATTATGTTGAGCAAAGGGCAATGAAGCTACTAAATTGTGTCAAGGCCATATGTTCATTCCAAAGCTATGATTTTGATATTCTATTGTTAGATTTTTTCAAGGAGGAGTTAAGTAAGAATATTGATGATGAGGAGTGTGAAAGTGAGTCAGAGATGTTGAGAATAGGTAAGGAATGGGTAAAAGGGTCATTTGGTTATGACATAGGTCATGTGAATAATTATGTTTGTATCAAAGACATGGATAAAAGAGGTGAATGGAGCAAGTTTGAGAAAGAGAAAGAAGAAATGGTTTTGGAGATTGAAAAGGAGATGTTGCATAGTTTGGTTGCTGAACTTTTGGACTTACATGATTAA 1335 0.3768 MSGEMQLKRFNTMERRPLRTLRDLLSENNNNSYYCSNSSSSCSSSGFKSLPRRINQTNKSSMQTQMKNPSTFQTLINTFKTILVKKSPSMILPRSISRKLSSSRRSSRLRNQTFCKGSTDEVEISTVKIKDIIRWRSFKDVTVEEEHNNKYPLSQSQPLDFHRCMMMGSTTTTTTTTTTTCSSSNGSSWNESDFTSIASGYSSSWEPQNDDVLISEKFPLSPLDVVVGKDLVQQKTNMAGPKEISSFQEDEQHSPISVLQIGKDEFPHYNQSLADIERRKQKFMDTFQIIESLAKFDLPNLDQYIILDENFSYNEDCDNYDYEVEEQDYVEQRAMKLLNCVKAICSFQSYDFDILLLDFFKEELSKNIDDEECESESEMLRIGKEWVKGSFGYDIGHVNNYVCIKDMDKRGEWSKFEKEKEEMVLEIEKEMLHSLVAELLDLHD* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2992 444 PANTHER OS04G0572500 PROTEIN 5 442 - -
Amo12g2992 444 PANTHER DUF4378 DOMAIN PROTEIN 5 442 - -
Amo12g2992 444 Coils Coil 361 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2992 Amo-Chr12 117398310 117400771 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2992 19 440 TRM (TON1 Recruiting Motif) Superfamily AT4G00770 28.571 8.37e-34 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2992 - - adu:107475793 757.673