Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2974 ATGGCTGCATCACTTGTTGAAGGAGCTTTTCTCTCTTCTTTTCTCAATGTTCTTTTCGACAGGCTGTCCGATGATAAGTTTGTCAACTGGATCCGAGGAAAGAAGCTTGACCAGGATCTGCGTGGAATGTTGGAGAATATTTTGAACGTGGTTGAAGCTGTGCTGAATGATGCTGAGAAGAAACAGATCACTCACAATGCTCTCAAGAGGTGGCTCAAAAATCTTCAAGATGCTGATGACTTGTTGGATGAAGTATGCGCCAAAGCTGCCACTCAAAAGGATCCAAGTAACTTCCTGTCTCATATCTTCAATTCACAAGATAGGGATATGGTTGTGACTACGATTGAAGAAGTCATTGCTAGCCTAGAGGATATTGCGAAATATAAAGATATTCTTGGTTTGGAAAAGATTGCAGCGAAGAACATGCTAGGGTGGATTCCATCAACCTCACTAAGGCATACCTTAGTGAAATTGTTGTTAGATGATACTAAAGATGGTGAAATATCTGTGATTCGCATCGTTGGCATGGATGGGATAGAAAAAGCTACTCAGGCAAAATTGGTTTATAATGATGCGGAAGTGAAACAAAAATTTCATGAATTTGATGTTCTTAAGATGACAAAGACTGTGATAGAGAAAACTGGTAATTCTTGTCACCTAAATGATTTAGATACAGTTCAAAATCATTTGAAGGATAAGCTAGAAGGGAAGAAATTCTTGGTTGTTGTAGATGATGTGTGGAGCAGTAATCGTGAGGGTTGGGAAAGCTTTCTAACTCCTTTTGAATGTGGAAGTGAGGGAGGTCATATTATTGTAACATCCCGTCTTGATTCAGTTGCTTCAATGGTGAAGACTAATGACATTCAACCTCTCAATTTGAGTTTGTTGCATGAGGAAGATTGTTGGTTAGTGTTTGCAAAACATACATTTTTTCCTACTAAATCTAGAGACCGTTTATCTTTAGAAATTATTGGTAGAAAAATTGTTCAAAAGTGTAAAGGGTTACTTTTGGCTGTCCAAACACTTGGGGGCTTATTAAGAACAAAAGATCATGAGAGGGAATGGATTGATGTTTTGAATAGCGAGATTTGGGAGTTTTTTGAAGATGAGAGTAGCATTCTTCTTGCATTAAGAATCAGTTATTACTATCTCCCTTCGTACTTAAAACGTTGCTTTGTTTATTGTTCTTTATACCCAAAGGACTACGAATTCAAAAGAGATAAACTGGTGTTATTGTGGAAGGCAGAAGGTCTTTTGCAGCAACCAAAGAGTGACATCAGTATAGAAGAAGTTGATCATTTTTTTCAACATTCTAACTCTGGTAAAAATTTATTTGTGATGCATGATCTCATGCATGATCTAGCGATATTCTGTGATGGAAAGTTCTTTTCTGGAATCATTGAACTCAAAAAAAATGCAGCCAAGTGA 1428 0.3732 MAASLVEGAFLSSFLNVLFDRLSDDKFVNWIRGKKLDQDLRGMLENILNVVEAVLNDAEKKQITHNALKRWLKNLQDADDLLDEVCAKAATQKDPSNFLSHIFNSQDRDMVVTTIEEVIASLEDIAKYKDILGLEKIAAKNMLGWIPSTSLRHTLVKLLLDDTKDGEISVIRIVGMDGIEKATQAKLVYNDAEVKQKFHEFDVLKMTKTVIEKTGNSCHLNDLDTVQNHLKDKLEGKKFLVVVDDVWSSNREGWESFLTPFECGSEGGHIIVTSRLDSVASMVKTNDIQPLNLSLLHEEDCWLVFAKHTFFPTKSRDRLSLEIIGRKIVQKCKGLLLAVQTLGGLLRTKDHEREWIDVLNSEIWEFFEDESSILLALRISYYYLPSYLKRCFVYCSLYPKDYEFKRDKLVLLWKAEGLLQQPKSDISIEEVDHFFQHSNSGKNLFVMHDLMHDLAIFCDGKFFSGIIELKKNAAK* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2974 475 Pfam Rx N-terminal domain 10 96 IPR041118 -
Amo12g2974 475 Gene3D - 144 289 IPR027417 -
Amo12g2974 475 PANTHER OS05G0414200 PROTEIN 31 462 - -
Amo12g2974 475 Gene3D - 295 380 IPR042197 -
Amo12g2974 475 Pfam NB-ARC domain 160 360 IPR002182 GO:0043531
Amo12g2974 475 PRINTS Disease resistance protein signature 332 346 - -
Amo12g2974 475 PRINTS Disease resistance protein signature 233 247 - -
Amo12g2974 475 PRINTS Disease resistance protein signature 170 185 - -
Amo12g2974 475 PANTHER DISEASE RESISTANCE PROTEIN RP 31 462 IPR044974 GO:0006952
Amo12g2974 475 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 395 IPR027417 -
Amo12g2974 475 Gene3D - 381 456 IPR036388 -
Amo12g2974 475 Gene3D - 32 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2974 Amo-Chr12 117071581 117073107 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2974 167 354 WRKY Transcription Factor Family AT5G45050 28.643 9.79e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2974 - - aip:107627934 726.087