Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2968 ATGCATGACTTGATACAGCAAATGGGTTGGGAAGTCGTTCGCCAAGAATCAAATAAAGATCCTACAGAGCTCACTCGAATAAATAAGCCTGAAGATTTTCACAATTTATTGAAAAATAGCAAAGGAACAAATTTAGTTGAAGGTATTATGATAGACTTGTCTCAAATTGGAGATCTACACTTCAATGCTGACACCTTTAAAAATATGCCTCAACTAAGGTTTCTTAAGTTTTATGCTCCATGGGATGAAAAACAGTTGAATGTGTACATTCCCATACCCCTGGAGCCGTTTTCTGCTAGACTCAAGTATTTGGAGTGGAATAGTTATCCTCTGAATTCTCTATCATCAATGTTTTGTGTGGAGCAGCTTGTTGAGCTTAGGATGCCAAACAGTCAAATTTCTAAACTTTGGGATGGAACGCAGGAACTTCCGAATTTGATAGTGCTTTACCTTTATGGATGTAAAAAGTTGGTAGAGCTTCCAGATTTCAGTAAAGCAACAAAGCTTAAAACCATAGATCTTTGGAATTGTGAAAAACTATGTCAACTTCATCCATCTATTTTATCCATCCAAACTCTTGAGGAATTATATCTTACTGGTTGCACAAAATTGAAGTGTGTCAAAAGCAATTTGAAGTCTCTTAAAACATTTTATGCTTATAATTGTTTAAGCCTGGAGAAATTTTCAGTGTCATCAGAAAAACTGTCGGATTTGGATATCTCTTTGTGGAGAATTAAAAGTCTACCAAATGAAATATGTAGCTTTTTTTCTCTTGAGTATCTTTGTCTTAGTAATTGCAGAAAGCTAATTGATCTCCCACGCAACATCAAAGCTCAATCAAGGTTAAGGGCTCTTGACGTAAGTGGTTGTAGTAGTCTTCAATCTATACCAGAACTTCCACCATCTATTGAAGAGCTTTATGCTGTTGATTGCACATCACTTGAAACAATATTCAATTTGAAGGCAGTATTTAGTTTGAATAGGAGAAAGATCTCATTTGCAAATTGTGTGAGATTGGAACAAGAGTCAGTGAATGATATTATGGAAGATGCTCATCTCACAATATTCAGAAATGTTTTATTGTTGTCAGCAGATCCAGATCAGATGATAAATTATTATTATTATCATAAAATGTTAGGTTGTGTTTGTTATCCTGGGTACAAAGTTCCAAAGTGGTTCGGATGTGAAACAAGAGGAGCATCCATAATAATTGAACTTCATCAACCTTACTACGAGTTGTTGGGTTTCTTCTTCTGTTGTGTTATTTCTCAAAACTTACCTTCTTATTATTTTGAAGAATTGGATCTTGTCAATATCAAGTGTGAATACCGCCACTTCGGAGATGGCGTAAAGGACACATTTGTAAGTAAAAATCTAAACTTTGTTTCTAAACGACGATGTAGCTGTGATCATGTTTTAATATGGACTGATCCATTTGGTAGTGAAAACATATTGGGTGAAATTGAGAGGTGCAGACTCAGAGGTGGCAGTGATGATGATGATAGCACTTGCAACCAAAAGATGTCATTCAGATTCAGTATTGATAGACCTAAGAGAGGGAAGAGAGTCCAAATAAGGAGAGAAAATGATGAAGATTGTTTTATCAAAGGGTGTGGGGTTATTCCAATGTATGCCTCAACTCTCTTGGATGCCATTCAAAATCTTGAATTGGAGTTCAACTTGAAGCCTCATCATAACCCCATCCCAGGGATAAATCTGGACGAAGTAAGAAGTATGATGATCCGGAAGAGCAAAGGAAAATCAAAACTCCACTGA 1776 0.3604 MHDLIQQMGWEVVRQESNKDPTELTRINKPEDFHNLLKNSKGTNLVEGIMIDLSQIGDLHFNADTFKNMPQLRFLKFYAPWDEKQLNVYIPIPLEPFSARLKYLEWNSYPLNSLSSMFCVEQLVELRMPNSQISKLWDGTQELPNLIVLYLYGCKKLVELPDFSKATKLKTIDLWNCEKLCQLHPSILSIQTLEELYLTGCTKLKCVKSNLKSLKTFYAYNCLSLEKFSVSSEKLSDLDISLWRIKSLPNEICSFFSLEYLCLSNCRKLIDLPRNIKAQSRLRALDVSGCSSLQSIPELPPSIEELYAVDCTSLETIFNLKAVFSLNRRKISFANCVRLEQESVNDIMEDAHLTIFRNVLLLSADPDQMINYYYYHKMLGCVCYPGYKVPKWFGCETRGASIIIELHQPYYELLGFFFCCVISQNLPSYYFEELDLVNIKCEYRHFGDGVKDTFVSKNLNFVSKRRCSCDHVLIWTDPFGSENILGEIERCRLRGGSDDDDSTCNQKMSFRFSIDRPKRGKRVQIRRENDEDCFIKGCGVIPMYASTLLDAIQNLELEFNLKPHHNPIPGINLDEVRSMMIRKSKGKSKLH* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2968 591 Pfam Leucine Rich Repeat 122 141 IPR011713 -
Amo12g2968 591 Gene3D Ribonuclease Inhibitor 213 349 IPR032675 -
Amo12g2968 591 Gene3D Ribonuclease Inhibitor 23 212 IPR032675 -
Amo12g2968 591 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 1 269 - -
Amo12g2968 591 SUPERFAMILY L domain-like 45 332 - -
Amo12g2968 591 Pfam C-JID domain 385 544 IPR045344 -
Amo12g2968 591 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 269 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2968 Amo-Chr12 117008802 117011102 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2968 1 310 WRKY Transcription Factor Family AT4G12020 33.529 1.15e-37 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2968 - - aip:107626076 1109.36