Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2964 ATGACTATATTATTCAGAATTGTAACAACCACTAACAATGCAATAACAGCACTGAAGCTATTAAGAGAAAAGAAGAACAAGTTTGAAGAGGTTCCGCTGTTTCAGCTTTGCTCCTTCGTCCCTGCTGGTGCCTTCGTCTCTACCATTCCCTACTCAGCCTTCTCTGCCATTGATACAAGGATTCAATCATCAAACAAGACCTTTTCCCTTGCTGAGTTCACTGCCGCCAAAACCGACTACCAAGATCCCATCGTGCTCCCCACCGGTCCGCGCCAGCGCACCGCCGAGGAGCTTGACCGCGACCGCAACCGTCTTGGCAGCGGCTTCAGGAACTACGGCGATGACCGCGCCAACAGAAGCTTCGGTGATGGTGATGATTCCTCCAATTCAAGGTGGGGTTCCTCTAGGGTTTCTGACAAGCCGAGGCAGAACGGTGGGTTTAGGGATTCGAACCGTGAATTGGCTCCTTCCCGCGCTGACGAGATTGATAATTGGGCTGCCGCGAAGAAATCAACGGTCGGTAATGGTTTCAAGAGGAGGGAAAGGGATAGGGATATAGAAAGGAGCGGTTTTTTCGATTCCCAATTGCGTGCTGATGAATCCGATAGTTGGGTTACGAACAAGAGTTATGTGCCGTCAGAGAGTCGGAGATTTGGTTCCAACGGCGGTTTTGGTGGTCTTGGGTTTGAAAGAGAGAGGAAGGTAGGGTTTGGGTCTAGCGGCGGCGAAGATTCTGATAATTGGAACAAGAAAAAGGTTGAATTTAACGGTGAAAGTGAGAGGAGTGAGGGTGGTGGTGGGAGACCTAGGCTTGTTTTGCAACCTCGTACAACGCCTGTGAACAATGAGAGCCAGGAGGGTCGGCAACCACCACAAGTGTCAGAGGAAGAGTCTGTGAAAGAGGTCCTATTAGAAACATCCATTGCCAAACGAAATCAAGTTCCAATTTTGAAGCCAGAATCGGACACCCTTCTGCCTCCTCTTCAAAACCCTGATGACAAAATCGAATCAAAGAACCCACATCCCATTCCCAACCCCATTATCATCAACAAAAAAGAAGGTGAAGTCTCAGAGGTAGTGTCTCAGCTCTCAGAAGAACCATGCAGCATCAGTGGAAGCTTCTCCACCGCTACCACAGTTACGGAGAAGAGAGAAAAAGAAGTAACCAGTAAAAGAAGCATCAGGGAGGGAACAACAACAATGATGAAGAATCATAAGTGGAACAGCAACAGATCCCCGTCGATGAAGCGCCCTCACGCCTGTGATGGCAATGTCGCCTCCGGGAGGGAGCGGAGTGTTGAGGAAGAAGGCACCAGAGTGGGTATTGGAGAGTGA 1335 0.4944 MTILFRIVTTTNNAITALKLLREKKNKFEEVPLFQLCSFVPAGAFVSTIPYSAFSAIDTRIQSSNKTFSLAEFTAAKTDYQDPIVLPTGPRQRTAEELDRDRNRLGSGFRNYGDDRANRSFGDGDDSSNSRWGSSRVSDKPRQNGGFRDSNRELAPSRADEIDNWAAAKKSTVGNGFKRRERDRDIERSGFFDSQLRADESDSWVTNKSYVPSESRRFGSNGGFGGLGFERERKVGFGSSGGEDSDNWNKKKVEFNGESERSEGGGGRPRLVLQPRTTPVNNESQEGRQPPQVSEEESVKEVLLETSIAKRNQVPILKPESDTLLPPLQNPDDKIESKNPHPIPNPIIINKKEGEVSEVVSQLSEEPCSISGSFSTATTVTEKREKEVTSKRSIREGTTTMMKNHKWNSNRSPSMKRPHACDGNVASGRERSVEEEGTRVGIGE* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2964 444 MobiDBLite consensus disorder prediction 275 292 - -
Amo12g2964 444 MobiDBLite consensus disorder prediction 255 345 - -
Amo12g2964 444 Pfam Plant specific eukaryotic initiation factor 4B 81 283 IPR010433 GO:0003743
Amo12g2964 444 MobiDBLite consensus disorder prediction 394 415 - -
Amo12g2964 444 MobiDBLite consensus disorder prediction 123 141 - -
Amo12g2964 444 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 69 302 IPR010433 GO:0003743
Amo12g2964 444 MobiDBLite consensus disorder prediction 369 444 - -
Amo12g2964 444 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B3 69 302 - -
Amo12g2964 444 MobiDBLite consensus disorder prediction 82 155 - -
Amo12g2964 444 MobiDBLite consensus disorder prediction 93 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2964 Amo-Chr12 116963510 116966057 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2964 66 280 Eukaryotic Initiation Factors Gene Family AT4G38710 43.852 2.33e-36 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2964 - - aip:110269318 471.855