Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2956 ATGAGTGGGGAAATGCAACTAAAGAGGTTCAACACAATGGAGAGAAGGCCTCTTAGAACCCTAAGGGACCTATTGAGTGAGAATAATAATAATAGTTATTATTGTTCAAACTCATCATCATCATGTTCTTCAAGTGGATTCAAATCACTACCAAGAAGGATTAATCAAACAAATAAAAGTAGCATGCAAACCCAAATGAAGAATCCCTCAACCTTTCAAACCCTAATAAACACATTCAAGACCATCTTAGTGAAGAAATCACCCTCTATGATCTTGCCACGTAGCATCTCACGCAAGCTTTCGTCATCAAGAAGGTCAAGGAGAATAAGGAACCAAACATTTTGCAAAGGAAGCACTGATGAAGTCGAAATCAGCACCGTCAAGATCAAGGACATCATACGGTGGAGATCTTTCAAGGATGTTACTGTGGAGGAGGAGCACAATAACAAATATCCACTGTCACAATCTCAACCGTTGGATTTTCACCGTTGCGTGATGATGGGGTCCACTACTACAACAACTACTACGACAACCACTACCACGTGTAGTAGCAGCAATGGGTCTAGCTGGAATGAGAGTGATTTTACCTCAATAGCCTCAGGGTACTCGTCTTCATGGGAACCACAAAACGACGACGTTTTGATAAGTGAAAATTTTCCACTTTCACCCTTTGATGTTGTTGTCGGCAAGGATTTGGTGCAACAAAAAACAAATATGGCGGGGCCCAAGCAAATTTCAAGTTTCCAAGAAGATGAACAACATAGTCCAATTTCAGTTCTTCAAATTGGAAAAGATGAATTCCCACACTATAATCAAAGCCTTGCCGATATTGAAAGAAGAAAACAAAAGTTCATGGACACCTTTCAAATAATTGAGAGCCTTGCAAAATTTGACCTACCAAACTTAGACCAATATATCATATTGGATGAGAACTTTAGCTATAATGAAGATTGTGATAATTATGATTATGAAGTTGAAGAACAAGATTATGTTGAGCAAAGGGCAATGAAGCTACTAAATTGTGTCAAGGCCATATGTTCATTCCAAAGCTATGATTTTGATATTCTATTGTTAGATTTTTTCAAGGAGGAGTTAAGTAAGAATATTGATGATGAGGAGTGTGAAAGTGAGTCAGAGATGTTGAGAATAGGTAAGGAATGGGTAAAAGGGTCATTTGGTTATGACATAGGTCATGTGAATAATTATGTTTGTATCAAAGACATGGATAAAAGAGGTGAATGGAGCAAGTTTGAGAAAGAGAAAGAAGAAATGGTTTTGGAGATTGAAAAGGAGATGTTGCATAGTTTGGTTGCTGAACTTTTGGACTTACATGATTAA 1338 0.3767 MSGEMQLKRFNTMERRPLRTLRDLLSENNNNSYYCSNSSSSCSSSGFKSLPRRINQTNKSSMQTQMKNPSTFQTLINTFKTILVKKSPSMILPRSISRKLSSSRRSRRIRNQTFCKGSTDEVEISTVKIKDIIRWRSFKDVTVEEEHNNKYPLSQSQPLDFHRCVMMGSTTTTTTTTTTTTCSSSNGSSWNESDFTSIASGYSSSWEPQNDDVLISENFPLSPFDVVVGKDLVQQKTNMAGPKQISSFQEDEQHSPISVLQIGKDEFPHYNQSLADIERRKQKFMDTFQIIESLAKFDLPNLDQYIILDENFSYNEDCDNYDYEVEEQDYVEQRAMKLLNCVKAICSFQSYDFDILLLDFFKEELSKNIDDEECESESEMLRIGKEWVKGSFGYDIGHVNNYVCIKDMDKRGEWSKFEKEKEEMVLEIEKEMLHSLVAELLDLHD* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2956 445 Coils Coil 362 382 - -
Amo12g2956 445 PANTHER OS04G0572500 PROTEIN 5 443 - -
Amo12g2956 445 PANTHER DUF4378 DOMAIN PROTEIN 5 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2956 Amo-Chr12 116882934 116885375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2956 13 441 TRM (TON1 Recruiting Motif) Superfamily AT4G00770 29.870 3.96e-34 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2956 - - adu:107475793 764.222