Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2897 ATGGCTGGAGTAGACTCAACATCAATCACCATAGAATGGGCAATGACAGAGTTATTACGTAATCCAGAAAAATTGGAAAAACTTAGAAAAGAGCTTCAATGTGTTCTTGGCAAAGGTGAACAAAATCATGAACAAATTGAAGAATCACATATCTCAAAGCTTCCTTTTCTAAGAGCAGTGGTTAAAGAAACTTTGCGCTTGCATCCACCTGCCCCATTATTAGCACCACACAAGGCACATGAAGATGTTGAGATAACTGGATTCATGATTCCTAAGAATGCACAAATTTTGGTTAATGTATGGGCCATGGGAAAAGATTCAAGTATTTGGGAACATCCAAATGAATTCATGCCTGAAAGATTCTTAGATAGTAAAATTGATATTCATGGACATGATTTTGAATTAATTCCATTTGGTGCTGGAAGAAGGATATGCCCTGGATTGCCATTGGGTTATAGAAGTGTGCACATTGCGTTGGCTACTCTTCTAAATGGCTATGATTGGAAGCTAGCAAATGGACAAAAATCAAAAGATTTGGATATGTCTGAGAAATTTGGACTTACTTTGCATAAGGCTCAACCTCTCCAAGCCATTCCCATTAAATCACAATAA 612 0.3725 MAGVDSTSITIEWAMTELLRNPEKLEKLRKELQCVLGKGEQNHEQIEESHISKLPFLRAVVKETLRLHPPAPLLAPHKAHEDVEITGFMIPKNAQILVNVWAMGKDSSIWEHPNEFMPERFLDSKIDIHGHDFELIPFGAGRRICPGLPLGYRSVHIALATLLNGYDWKLANGQKSKDLDMSEKFGLTLHKAQPLQAIPIKSQ* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2897 203 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 201 - -
Amo12g2897 203 SUPERFAMILY Cytochrome P450 1 199 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2897 203 Gene3D Cytochrome P450 1 201 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2897 203 Pfam Cytochrome P450 1 188 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2897 203 PRINTS P450 superfamily signature 59 70 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2897 203 PRINTS P450 superfamily signature 136 145 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2897 203 PRINTS P450 superfamily signature 2 19 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2897 203 PRINTS E-class P450 group I signature 135 145 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2897 203 PRINTS E-class P450 group I signature 145 168 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2897 203 PRINTS E-class P450 group I signature 58 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2897 203 PRINTS E-class P450 group I signature 11 37 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2897 203 PRINTS E-class P450 group I signature 99 123 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2897 203 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 138 147 IPR017972 GO:0005506|GO:0016705
Amo12g2897 203 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2897 Amo-Chr12 115734894 115735505 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2897 2 203 Cytochrome P450 AT2G45570 58.911 2.98e-87 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2897 - K20556 aip:107626003 359.762