Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2888 ATGGAAAAGGGAAGTTTGTTCTATAACCTAGCCATTAATGAAGAAGCTCAAGTGCTGAACTGGAGTAAGAGAGTAAACATTATCAAAGGGACTGCATTTGCTCTCACTCATATGCACCATCATTGCACTTCACCCATTGTCCATCGAGATGTAACTAGTACCAATGTTTTGTTGACTTTAAATTTAGAGGCTTGTCTATCAGATTTTGGTACAGCTAAACTACTTTCTTCTGATTCATCTAATCAAACTCTATTAGCTGGCACTCCTGGATACATTGCTCCAGAGATGGCTTATAACATCAAYGTGACAACAAAATGTGATGTTTATGRTTTTGGTGTGGTGACTTTGGAAACAATAATGGGCGAACACCCTAAGGAACTAATTTCCAATGTGTCAAAACCATCTGCTCCAAAGATCATGCTCAAAGATATACTGGATTCACGTATTCGATTGCCTTTTCTTCGAAAAGAAATGCAGGATATTGTACTTGTTGTAACATTAGCACTAGCATGCTTGCATCCCAACCCAACATCAAGACCTTCAATGCAGGACATAGCTAATAAGCTTTTGTTTTCAAACTCAGCCATTGCTTTGGCATTTTGA 603 0.3814 MEKGSLFYNLAINEEAQVLNWSKRVNIIKGTAFALTHMHHHCTSPIVHRDVTSTNVLLTLNLEACLSDFGTAKLLSSDSSNQTLLAGTPGYIAPEMAYNINVTTKCDVYXFGVVTLETIMGEHPKELISNVSKPSAPKIMLKDILDSRIRLPFLRKEMQDIVLVVTLALACLHPNPTSRPSMQDIANKLLFSNSAIALAF* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2888 200 Pfam Protein kinase domain 1 188 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo12g2888 200 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 1 192 - -
Amo12g2888 200 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 192 - -
Amo12g2888 200 Gene3D Transferase(Phosphotransferase) domain 1 1 196 - -
Amo12g2888 200 ProSiteProfiles Protein kinase domain profile. 1 191 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo12g2888 200 ProSitePatterns Tyrosine protein kinases specific active-site signature. 46 58 IPR008266 GO:0004672|GO:0006468
Amo12g2888 200 SUPERFAMILY Protein kinase-like (PK-like) 1 192 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2888 Amo-Chr12 115572767 115573446 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2888 1 189 Receptor kinase-like Gene Family AT1G72180 35.500 1.26e-34 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Amo12g2888 Pkinase 4.8e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2888 - - adu:107475713 348.206