Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2882 ATGACCTCTAGGACATTGCTACTTTTCTTGGCCTTAATGGTAACAAATTCAATTGCTATCATGGACAAACAGACATATATAGTACACATGGACAAGACCAAGATCAAATCCTCAATTCATTCACAAGACAGCACTAAACCATGGTTTCAATCTGTCATTGATTTCATCACTGAGGTTTCAGTGCAAGAAAATGAAGAAGAGGAAATAGCTCCTCAGCTTCTTTATGTCTATGAAACCAACATGTTTGGTTTTTCTGCACATCTTTCAAGTAAACAACTTGAATACTTGAACCAAGTTGATGGTTTCCTTGCAGCAATGCCTGATGAGCTATTAACCCTTCACACAACACACACCCCACATTTTCTTGGCCTACAAAATGGGAGAGGACTTTGGAGTGCTCCTAGTTTGGCCTCTGATGTGATCGTAGGGATCCTTGACACCGGTATATGGCCGGAACACATCAGTTTCCAAGACACTGGTTTGACAGAAGTACCCTCTAGATGGAAAGGTTCTTGTGAAGAAGGGACCAAGTTCTCTGCCTCAAATTGTAACAAGAAGCTAATTGGAGCAAGAGCCTTTTATAAAGGGTATGAAAAAGTTATCGGGAGAATCAATGAAACGCTGGATTATCGTTCGCCAAGAGATTCTCAAGGGCATGGAACACACACAGCCTCAACTGCAGCCGGTAACATGGTGAACAATGCAAGCCTATTCGGCATGGCTAAAGGTTCAGCAAGTGGAATGAGGTATACCTCAAAAGTTGCGGCTTATAAAGTATGCTGGCCACTAGGCTGCGCCAATTCGGATATATTGGCAGCTATGGATCAAGCTGTTGCTGATGGGGTAGACATATTGTCACTCTCTTTAGGCGGCATTGCAAAGCCTTACTACAATGATAGTATTGCCATAGCTTCATTTGGGGCAACTCAAAATGGAGTTTTTGTTTCTTGCTCTGCAGGGAATTCGGGCCCTTTCAGATCAACCGTTGGAAATGTTGCACCATGGATCATCACTGTTGCTGCTAGCTACACTGATAGAAGCTTTCCAACCAAAGTGAAGCTAGGGAATGGACAGGTTTTCAAAGGGGCATCTTTGTATCATGGCAAGACAATCCAATTGCCTCTTGTGCATGCTAATACCACAGGAACACAAAGGACAGCACAATTTTGCACCAAAGGTTCACTTGATCCAAAGCTAGTCCATGGAAAAATAGTTGCTTGTGAACGAGGAATGAATTCCAGAACTGAAAAGGGCGAGGTGGTGAAAATGGCAGGCGGGGCAGGAATGCTACTACTAGTGAATCAAGGAGAAGAGCTTTTTGCTGACTCTCACATTTTGCCAGCAACTTCCTTAGGTGCCTCAGCAAGCAATGCAATTCGGAACTACATCCACTCTGCCAAATCTCCAACAGCTTCAATTTCATTCATAGGAACAATGTATGGTGACCCTGCACCAGTTATGGCAGGATTTTCTGCTAGAGGGCCAAGTATAGTGGGGCCAGATGTGATTAAACCAGATGTAACTGCACCTGGTGTGAACATCTTGGCTTCATGGCCACCATTAACTGCTCCAAGCCTGCTTAAGAGTGACAAAAGGCGTGTGCTATATAACATAGTTTCCGGCACCTCGATGTCTTGCCCTCATGTTACCGGCATAGCAGCACTTCTCAAATCTGTGCACAAAGATTGGTCACCAGCAGCTATCAAATCTGCACTGATGACCACAGCTTACACAGTGAACAACAGAGGTTCCCCTCTTTTAGACATTGCATCGAACACCTCATCTGCATTCGCCAACCCTTTTGCATTTGGTTCAGGCCATGTCAACCCAGAATGTGCCTCTGATCCAGGGTTAGTCTATGATATCACCAACAAAGATTACCTAAACTACTTGTGCAGCCTTAACTATACTCCTACCCAAATTGCTATAATCTCAAAGGGTCATTTCAAATGCTCCAAAGATACATTTTTTCAACTTGGTGACCTAAACTACCCTTCATTTTCTGTCTCATTTGACATAAATGGCACAAATTCTAGTGTTACATACAAGAGGGTAGTCACAAATGTTGGATATCCTAGTAGTTCTTATACAGTGAAAGTTGAAGAACCAAATGGAGTATCAGTTAAGGTTGAACCAAGGAATTTGAGTAATGGATCTCCAAGCCAAAATCGGAACTCTAGGTCTAGGAGCCCTTCTGATCATGCAAGAGCTCAATCTCCAATTCCACATGGTGGTTCTGATCCACATGCACCATCAACTCATCATCACCCTGCATATTCATTCTCTTATCCTCCGGGACCATATTCCCACAACTATTACCCTCCACCTCCTTTATCACCTTCTTCACACCCTTCTCTTCCACACTCACCATGTAGCCATAGATATGCATACACCTCACTTCCTGTGTCACCCAGCCCCGGTTCTAGCTCCCCTGGTCCTCCAATTAACCGCCCTCCGCCTCAATTGGTTGCCTTTAACCGCCCTCTTCCGCGATTAGACTATCCCCTGAGTATCGGGGGGCCAACAACTAAACGGCGGCCTCCACCACGGCTGGACTATCCTCTGAGTCCGGGGCAAAAGTCAGCTTATTCTCCACCTCATTATTATACTTTCCCCTACCATCAAGGTCCTAAAAGTCCAGGAGTATCATCACAATCTAGTCAGAGTCCCATTTCCAGCTCTCCTAGGAGTCCTTCTTTGGAAAATGTTATATGCAATGTTCAGATATCAGATAGCAAGCTCGGTGCTCCTGCATCACCCTCTGCTCCTGCATCACCCCCTGCTCCTGCTGCACAAACTGGCCCTTTTGCACCACATTTTGCGCATTCGAATTCAGTTCCATTTCATGGGAGGAATGATGAATTTAATGGTTGTTCGGATAAATTCTCAGGCAGGAGACGTTCTACCTCTGATGTAGGGGATTTAAAGACTTCGCCTAGTGTGTCTAATGAATCGCCACGTAACCAGAGTTTGCAGCTTGCAAGCTATAAAGGGTCTTCTTTGAGAGCTTTGCTTCTACATGGAAATTTAGATATATGGATTCATGAAGCCAATAATCTTCCAAATCTAGACATGTTCCACAGAACTTTGGGGGATATGTTTGGCAAAATGCCTGGTAGTCCGGGCAAGGGCAATACCAGCGATCCTTATGTGTCAATTCGTGTATCAAGTGCTGTGATTGGGAGGACTTTTGTGATTAAGAACTGTGAGGACCCCGTTTGGGAGCAGCATTTTTGTGTTCCTGTTGCGCATAATGCTGCTGAAGTTATCTTTCATGTTAAGGACAGTGACGTCGTGGGATCAGAACTCATTGGTGTTGTGGCGATTCCAGTCGAACAAATACACTCAGGGGAAGTAATAAAAGGGGCCTACCCGATTTTGAATAGTAATGGGAAACCTGTTAAGCAAGGTGCTGTATTGAGCCTAACCATACAGTACACTCCAATTGATAAACTAGTCATGTATCAACAAGGAGTTGGAGCAGGTCCTGAGTATATCGGGGTTCCCGGCACTTATTTTCCATTGAGGAGAGGTGGAACTGTTACTCTATATCAAGATGCTCATGTTCCAGATGGCTGTCTCCCTAATTTGATGCTTGATAATGAGATGCATTATGTGCATGGAAAGTGTTGGTTTGACATATTTCAAGCAATAAGTCAAGCTCAACGGTTGATATATATCACGGGCTGGTCAGTATGGCACAAAGTTCAGTTGATTAGGGATGCCGGCCCAACGGAAAGCCTTGGCCATCTTTTGAGGTCTAAGTCACAGGAAGGAGTAAGAGTGCTTCTCCTTGTTTGGGATGACCCTACATCAAGAAACATCCTTGGTATACAAACGGATGGTCTCATGGCAACTCATGATGAGGAAACTCGAAAATTTTTCAAGCATTCTTCAGTACAAGTGCAGCTTTGTTCTCGCAATGCAGGAAAACGACATAGCTGGGCAAAACAAAAGGAAATTGAAGCAATATATACACATCATCAAAAAACTGTAATGGTGGATGCTGCTGCTGGAAATGGCAAAAGAAAAATTATAGCATTTGTTGGTGGACTTGATTTGTGTGACGGGCGATACGATAATCCATACCATCCTCTCTTTAGGACATTGCAGACACTGCATAAGGATGACTATCACAATCCATGTTTCGCGGGTAATACTGGTGGTTGCCTGCGAGAGCCGTGGCATGACTTGCACTCTAAAATTGATGGTCCAGCGGCTTATGATGTTTTGGCAAACTTTGAGGAGAGATGGTTAAGAGCTGCAAAACCTAAAGGGGTTTCAAAGGTAAAAGGTAATGCATATGATGATGCACTGCTTAGATTAGAACGGATTCAAGATTTTTTGACTGTGAATGATGTTCCTAGTGTCGATGACGATAATCCTGAGGCTTGGCATGTTCAGATATTTCGCTCGATTGATTCTAATTCTGTCAAGGGATTTCCAAAGGATCCAAAAATAGCACAAAGCATGGTGAACCCAAGACCTTTTTTGTGTATTTCTTCCTTTTTATGTTTATTTTCAAGTCTAAACTTCCGTCGCCACGAGAATGTTAAGCTTATTGTGGTTTTACAGAACTTGGTATGCAGAAAGAATGTGATGATTGACATGAGCATACATGAAGCATATGTGAAGGCGATCCGTTCAGCACAACATTACATTTATATAGAGAACCAATATTTCATTGGATCCTCATTCAATTGGAGTCAGACTCAATATAAGGATCTTGGTGCTGATAATTTAATTCCAATAGAAATTGCTTTGAAGATTGCTGAAAAGATTAGAGAAAATCAGAGATTCGCTGTGTACATTGTTATTCCAATGTGGCCAGAAGGTATTCCAACAGGGGCTGCCACCCAAAGGATTCTATATTGGCAGAACAAAACAATGCAAAATATGTATCAGACAGTATATAATGCTTTGGTTGAGACTGGACTTGAAACTGCATTCTCTCCACAAGACTATTTGAACTTTTTCTGTCTTGGCAATCGCGAGGCCTGTGGTATATATGAGAATGTTAATGGAACTGGAGCTCCTCCCCCAGCAAATAGTCCACAGGCACAAAGTCGAAATAATGGAAGATTCATGATTTATGTTCATTCAAAGGGTATGATAGTTGATGATGAATATGTGATAATTGGTTCTGCAAACATCAACCAGCGCTCCATGGACGGAGGAAGGGACACAGAGATTGCAATGGGAGCCTACCAACCTCATCATACATGGGCAAGAAACAATTCTGCTCCTCGTGGACAGGTCCATGGCTATAGGATGTCACTATGGGCAGAACACACAGGGACAATTGAAGAGTGCTTCTTCCAACCGGAGAGCCTTGAATGTGTCTCAAGGGTTAGAACAATGGGTGAACTGAATTGGAAACAATACTCAGCTAAAGAGGTATCAGAAATGAGAGGCCATCTTATGAAGTACCCTGTAGATGTTGATAGGAAGGGTAAGATTAAACCCATTCCTGGCTTTGAAGAGTTTCCTGATGTTGGAGGCAAGATTGTTGGTTCATGCTTTGGCATTCAGGAGAATCTAACCATTTAG 5550 0.4323 MTSRTLLLFLALMVTNSIAIMDKQTYIVHMDKTKIKSSIHSQDSTKPWFQSVIDFITEVSVQENEEEEIAPQLLYVYETNMFGFSAHLSSKQLEYLNQVDGFLAAMPDELLTLHTTHTPHFLGLQNGRGLWSAPSLASDVIVGILDTGIWPEHISFQDTGLTEVPSRWKGSCEEGTKFSASNCNKKLIGARAFYKGYEKVIGRINETLDYRSPRDSQGHGTHTASTAAGNMVNNASLFGMAKGSASGMRYTSKVAAYKVCWPLGCANSDILAAMDQAVADGVDILSLSLGGIAKPYYNDSIAIASFGATQNGVFVSCSAGNSGPFRSTVGNVAPWIITVAASYTDRSFPTKVKLGNGQVFKGASLYHGKTIQLPLVHANTTGTQRTAQFCTKGSLDPKLVHGKIVACERGMNSRTEKGEVVKMAGGAGMLLLVNQGEELFADSHILPATSLGASASNAIRNYIHSAKSPTASISFIGTMYGDPAPVMAGFSARGPSIVGPDVIKPDVTAPGVNILASWPPLTAPSLLKSDKRRVLYNIVSGTSMSCPHVTGIAALLKSVHKDWSPAAIKSALMTTAYTVNNRGSPLLDIASNTSSAFANPFAFGSGHVNPECASDPGLVYDITNKDYLNYLCSLNYTPTQIAIISKGHFKCSKDTFFQLGDLNYPSFSVSFDINGTNSSVTYKRVVTNVGYPSSSYTVKVEEPNGVSVKVEPRNLSNGSPSQNRNSRSRSPSDHARAQSPIPHGGSDPHAPSTHHHPAYSFSYPPGPYSHNYYPPPPLSPSSHPSLPHSPCSHRYAYTSLPVSPSPGSSSPGPPINRPPPQLVAFNRPLPRLDYPLSIGGPTTKRRPPPRLDYPLSPGQKSAYSPPHYYTFPYHQGPKSPGVSSQSSQSPISSSPRSPSLENVICNVQISDSKLGAPASPSAPASPPAPAAQTGPFAPHFAHSNSVPFHGRNDEFNGCSDKFSGRRRSTSDVGDLKTSPSVSNESPRNQSLQLASYKGSSLRALLLHGNLDIWIHEANNLPNLDMFHRTLGDMFGKMPGSPGKGNTSDPYVSIRVSSAVIGRTFVIKNCEDPVWEQHFCVPVAHNAAEVIFHVKDSDVVGSELIGVVAIPVEQIHSGEVIKGAYPILNSNGKPVKQGAVLSLTIQYTPIDKLVMYQQGVGAGPEYIGVPGTYFPLRRGGTVTLYQDAHVPDGCLPNLMLDNEMHYVHGKCWFDIFQAISQAQRLIYITGWSVWHKVQLIRDAGPTESLGHLLRSKSQEGVRVLLLVWDDPTSRNILGIQTDGLMATHDEETRKFFKHSSVQVQLCSRNAGKRHSWAKQKEIEAIYTHHQKTVMVDAAAGNGKRKIIAFVGGLDLCDGRYDNPYHPLFRTLQTLHKDDYHNPCFAGNTGGCLREPWHDLHSKIDGPAAYDVLANFEERWLRAAKPKGVSKVKGNAYDDALLRLERIQDFLTVNDVPSVDDDNPEAWHVQIFRSIDSNSVKGFPKDPKIAQSMVNPRPFLCISSFLCLFSSLNFRRHENVKLIVVLQNLVCRKNVMIDMSIHEAYVKAIRSAQHYIYIENQYFIGSSFNWSQTQYKDLGADNLIPIEIALKIAEKIRENQRFAVYIVIPMWPEGIPTGAATQRILYWQNKTMQNMYQTVYNALVETGLETAFSPQDYLNFFCLGNREACGIYENVNGTGAPPPANSPQAQSRNNGRFMIYVHSKGMIVDDEYVIIGSANINQRSMDGGRDTEIAMGAYQPHHTWARNNSAPRGQVHGYRMSLWAEHTGTIEECFFQPESLECVSRVRTMGELNWKQYSAKEVSEMRGHLMKYPVDVDRKGKIKPIPGFEEFPDVGGKIVGSCFGIQENLTI* 1850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2882 1849 MobiDBLite consensus disorder prediction 710 735 - -
Amo12g2882 1849 SUPERFAMILY Phospholipase D/nuclease 1538 1781 - -
Amo12g2882 1849 ProSitePatterns Serine proteases, subtilase family, serine active site. 541 551 IPR023828 -
Amo12g2882 1849 PANTHER PHOSPHOLIPASE D 917 1491 IPR015679 -
Amo12g2882 1849 Pfam Phospholipase D Active site motif 1696 1722 IPR001736 GO:0003824
Amo12g2882 1849 Pfam Phospholipase D Active site motif 1325 1358 IPR001736 GO:0003824
Amo12g2882 1849 SMART C2_3c 1009 1123 IPR000008 -
Amo12g2882 1849 PANTHER PHOSPHOLIPASE D ALPHA 1 1525 1849 - -
Amo12g2882 1849 Gene3D Endonuclease Chain A 1509 1745 - -
Amo12g2882 1849 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 1695 1722 IPR001736 GO:0003824
Amo12g2882 1849 CDD C2_plant_PLD 1003 1147 - -
Amo12g2882 1849 MobiDBLite consensus disorder prediction 954 972 - -
Amo12g2882 1849 MobiDBLite consensus disorder prediction 973 990 - -
Amo12g2882 1849 Pfam Subtilase family 138 581 IPR000209 GO:0006508|GO:0008236
Amo12g2882 1849 Gene3D Endonuclease Chain A 1202 1441 - -
Amo12g2882 1849 Pfam Phospholipase D C terminal 1769 1839 IPR024632 -
Amo12g2882 1849 PANTHER PHOSPHOLIPASE D 1525 1849 IPR015679 -
Amo12g2882 1849 Pfam Fibronectin type-III domain 661 724 IPR041469 -
Amo12g2882 1849 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 142 153 IPR023827 -
Amo12g2882 1849 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 1323 1358 IPR001736 GO:0003824
Amo12g2882 1849 PANTHER PHOSPHOLIPASE D ALPHA 1 917 1491 - -
Amo12g2882 1849 MobiDBLite consensus disorder prediction 914 990 - -
Amo12g2882 1849 MobiDBLite consensus disorder prediction 806 825 - -
Amo12g2882 1849 MobiDBLite consensus disorder prediction 797 900 - -
Amo12g2882 1849 Gene3D - 631 728 - -
Amo12g2882 1849 PRINTS Subtilisin serine protease family (S8) signature 137 156 IPR015500 -
Amo12g2882 1849 PRINTS Subtilisin serine protease family (S8) signature 540 556 IPR015500 -
Amo12g2882 1849 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Amo12g2882 1849 Pfam Peptidase inhibitor I9 25 114 IPR010259 -
Amo12g2882 1849 CDD Peptidases_S8_3 111 577 IPR034197 -
Amo12g2882 1849 Gene3D Peptidase S8/S53 domain 139 627 IPR036852 GO:0004252|GO:0006508
Amo12g2882 1849 MobiDBLite consensus disorder prediction 705 761 - -
Amo12g2882 1849 Gene3D C2 domain 1004 1138 IPR035892 -
Amo12g2882 1849 SMART pld_4 1695 1722 IPR001736 GO:0003824
Amo12g2882 1849 SMART pld_4 1323 1358 IPR001736 GO:0003824
Amo12g2882 1849 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 14 114 IPR037045 -
Amo12g2882 1849 ProSiteProfiles Serine proteases, subtilase domain profile. 118 614 - -
Amo12g2882 1849 SUPERFAMILY Subtilisin-like 113 618 IPR036852 GO:0004252|GO:0006508
Amo12g2882 1849 CDD PA_subtilisin_like 352 473 - -
Amo12g2882 1849 Gene3D - 345 480 - -
Amo12g2882 1849 MobiDBLite consensus disorder prediction 877 900 - -
Amo12g2882 1849 ProSiteProfiles C2 domain profile. 986 1124 IPR000008 -
Amo12g2882 1849 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1006 1149 IPR035892 -
Amo12g2882 1849 Pfam C2 domain 1008 1126 IPR000008 -
Amo12g2882 1849 Pfam PA domain 373 458 IPR003137 -
Amo12g2882 1849 SUPERFAMILY Phospholipase D/nuclease 1201 1422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2882 Amo-Chr12 115460112 115469766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2882 932 1849 Phospholipase D Gene Family (Wang group) AT2G42010 66.492 0.0 1291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2882 K01115 - gmx:100805294 1360.13