Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2881 ATGTTTTCACATAAACTTACCAACTTTTCTTCTCTTCTTTGGCTTCCATTGCTTTTGATCCTACTGAGCAATGCTGAAAACTTTTACATTGTTTTCTTAAGAGATCATCCTCTTATTAGAGACAATGCACATGAGGCACATTTAAATGTTCTATCAACTGTTAAAGAAAGCCACATTGAAGCCAAAGAATCCTTGGTATACAGCTACACAAAGAGTTTTAATGCATTTGCTGCTAAACTCTCTGAGGATGAAGCCAAAAAGTTATCTGCCAAGGATGAAGTGCTTTCAGTGTTTCCAAATCGGTATCACAAACTGCACACAACAAGATCATGGGACTTCATTGGATTACCTTTGACTGCTAAGAGAAAATTGCAGTCAGAGAGTGACACCATTGTAGGGCTTTTGGACACAGGGGTTACTCCAGAGTTTCAAAGCTTCAAGGACAATGGACTTGGTCCTCCACCAGCTAAATGGAAAGGAACTTGTGATCACTTTGCTAATTTTTCAGGCTGCAATAACAAGCTTATAGGAGCAAGATACTTCAAGCTTGATAAAATGGAAGATCCAGAAGATATATTGTCTCCCATAGATGTTAATGGGCATGGAACTCACACTTCTTCAACAGCAGCAGGAAGTCTTGTCCCTAAAGCAAGTCTCTTGGGCTTGGCCGAAGGCACTGCTCGCGGCGCAGTTCCATCGGCCAGGCTGGCCATTTACAAGGTCTGCTGGCAGAGCAGTGGATGTGCTGACATGGACTTGTTAGCTGCATTTGAAGCAGCTATCCATGATGGTGTGGATGTCATATCAATTTCAATAGGTGGAGGGGACACAAATTATTTGAAGGACTCCATTGCAATTGGAGCATTTCATGCCATGAGGAATGGCATAATAACTGTGGCCTCGGCCGGAAATGATGGCCCGGCTATGGGGACTGTCACGAATACTGCGCCGTGGATTGTGACAGTTGCAGCTAGTGGCATTGATAGGGAGTTCAAAAGTACTATAGAGTTGGGGAATGGAAAGAATGTTTCTGGGGCAGGAGTAACCACTTTTAGTCCAAAACAAAAAGAGTACCCTCTAATCAATGGTGTTGATGCAGCCAAAAACTCTGATAGCATGGACAGTGCTAGCTTCTGTTTTGAAGACTCTTTAGACCCAAAAAAGGTGAAAGGAAAGATTGTATACTGCAAACAAGGAACTGGTGGAACTGAAGGTGTTATCAAAGGGTATGGAGGAATTGGAACTATACTTGAAAATGAACAATTTCCTGAAGTTGCCCAAATTTTCATGGCTCCTGCTACTATTGTTAATACTACCATAGGTCAAAGTATTACCACTTATATAAAGTCAACAAGATCACCATCAGCAGTGATACTTAAGAGCCATGAAGTAAAAAGACCAGCTCCATTTACTGCTTCATTTTCATCAAGGGGTCCAAATCCAGGTTCCAAAAACATTCTCAAGCCTGATATAGCAGCACCTGGAGTTAACATATTGGCATCTTATACACTAAGGAAATCAATAACTGGTTTGAAAGGAGATACTCAATTCTCAGAATTCACTCTAATGTCAGGAACTTCCATGTCATGCCCTCATGTTGCTGGAGTAGCAGCATATGTCAAATCTTTTCACCCGGATTGGACTCCTGCTGCTATCAGATCTGCCATTATTACCACAGCTAAACCTATGAGCAAGAGAGTTGACAAGGAGGCCGAATTCGCCTTCGGCGCTGGTCAAATAAACCCAACCAAAGCCGTCAACCCCGGTCTAATCTATGACATGGACGACCTTGGTTACATCCAATTCCTATGCCATGAGGGCTACAATGGTTCCAATTTATCAGTACTAGTAGGACACTCTATAAATTGCACCTCTTTGGTACCAGGACTTGGCCATGATGCTATCAACTACCCTACAATACAATTCAATGTGAAAAAAGACAAAGAAACAACCCTTGGTGTGTTTAGGAGAAGAGTGACCAATGTTGGTCCTGTTCCAACAATCTTCAATGCAACCATCACAGCTCCTAAGGGACTGGAAATTACAGTTAAGCCAAGTAGCCTTGTTTTCTCAAAGGCTATGCAACAAAGGAGCTTCAAGGTTGTGGTGAAAGCAAAAACAATGGCAAGCATGAAAGTTGTGTCTGGCTCTCTTGTTTGGAGAAGTCCACGTTACATTGTTAGGAGCCCTATTGTAATCTATAGTCCTTAA 2211 0.4211 MFSHKLTNFSSLLWLPLLLILLSNAENFYIVFLRDHPLIRDNAHEAHLNVLSTVKESHIEAKESLVYSYTKSFNAFAAKLSEDEAKKLSAKDEVLSVFPNRYHKLHTTRSWDFIGLPLTAKRKLQSESDTIVGLLDTGVTPEFQSFKDNGLGPPPAKWKGTCDHFANFSGCNNKLIGARYFKLDKMEDPEDILSPIDVNGHGTHTSSTAAGSLVPKASLLGLAEGTARGAVPSARLAIYKVCWQSSGCADMDLLAAFEAAIHDGVDVISISIGGGDTNYLKDSIAIGAFHAMRNGIITVASAGNDGPAMGTVTNTAPWIVTVAASGIDREFKSTIELGNGKNVSGAGVTTFSPKQKEYPLINGVDAAKNSDSMDSASFCFEDSLDPKKVKGKIVYCKQGTGGTEGVIKGYGGIGTILENEQFPEVAQIFMAPATIVNTTIGQSITTYIKSTRSPSAVILKSHEVKRPAPFTASFSSRGPNPGSKNILKPDIAAPGVNILASYTLRKSITGLKGDTQFSEFTLMSGTSMSCPHVAGVAAYVKSFHPDWTPAAIRSAIITTAKPMSKRVDKEAEFAFGAGQINPTKAVNPGLIYDMDDLGYIQFLCHEGYNGSNLSVLVGHSINCTSLVPGLGHDAINYPTIQFNVKKDKETTLGVFRRRVTNVGPVPTIFNATITAPKGLEITVKPSSLVFSKAMQQRSFKVVVKAKTMASMKVVSGSLVWRSPRYIVRSPIVIYSP* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2881 736 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.14 28 734 - -
Amo12g2881 736 Gene3D - 328 464 - -
Amo12g2881 736 Gene3D Peptidase S8/S53 domain 129 596 IPR036852 GO:0004252|GO:0006508
Amo12g2881 736 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 734 IPR045051 -
Amo12g2881 736 ProSiteProfiles Serine proteases, subtilase domain profile. 110 586 - -
Amo12g2881 736 ProSitePatterns Serine proteases, subtilase family, serine active site. 525 535 IPR023828 -
Amo12g2881 736 CDD PA_subtilisin_like 334 458 - -
Amo12g2881 736 CDD Peptidases_S8_3 103 560 IPR034197 -
Amo12g2881 736 Gene3D - 603 735 - -
Amo12g2881 736 Pfam Fibronectin type-III domain 635 733 IPR041469 -
Amo12g2881 736 Pfam Subtilase family 128 578 IPR000209 GO:0006508|GO:0008236
Amo12g2881 736 SUPERFAMILY Subtilisin-like 126 590 IPR036852 GO:0004252|GO:0006508
Amo12g2881 736 PRINTS Subtilisin serine protease family (S8) signature 197 210 IPR015500 -
Amo12g2881 736 PRINTS Subtilisin serine protease family (S8) signature 127 146 IPR015500 -
Amo12g2881 736 PRINTS Subtilisin serine protease family (S8) signature 524 540 IPR015500 -
Amo12g2881 736 Pfam Peptidase inhibitor I9 29 106 IPR010259 -
Amo12g2881 736 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 106 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2881 Amo-Chr12 115452911 115457369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2881 24 574 Subtilisin-like Serine Gene Family AT4G00230 65.336 0.0 736
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2881 - - ccaj:109800351 1174.46