Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2867 ATGAAAGCTCAAAGCCCCGAAGAAGAAGAAGAAGAAGAAACACAAACACCACGCTTTTGCTGCCTCTCGCACGAGTTCTTCCGCGCCGCTTCTGCCAATCCTAACAAAACCGCCGTCATTCACGCGTCTGGCGTCGCCCACCTCTCCACGCGCCTGCGCCAAACTGCTCATCCTTTTCCCCCTCCTGCCTCCTCAAATTTCAACCATGACAATATTTCCACGCTCTTAGAACAGCGCGTGGAGTCACTCTCTCCCCCGGTCTACAACGGTGACCGTTGCTTTACTTACTCTCATCTCTTGAAAGCCGTTGATTCCCTCGCCTCTCGTATAAGCTCTATCCTGCTTGGTGCGGATGACCCTCACCTTATCACGCCCAAACCTCAAGCATTGGCATCCGGTGTTTGTGCTGCAGGTGACAATGCGGTTAACCATGAAAAGGGAACTATTTATGCAGCTGAGAACTTGGAAACTAATGTGCCTAGCTCAGAGTCGGTGGTTGACTCGAGTGAAGAGTATAGGCCAAAGATAGTGGGAATATATATGCCACCTTCTGCGGAATATATTGTAGCCGTTCTTTCTGTATTGAGATGCGGGGAGGCTTTCTTGCCTTTGGACCCTTATTGGCCGAAAGAAAGGTTATTGTCAATTGTCGCTTCCTCAAGCGCTGATCTCATTATAGGTTCCAAATCTTCATTTGGTAGTGAGTTGGACGAGCTTGATGAATCGCATTGGCTGGTAAAGTCAGTAAGTTGTCCTGTTTTAAGCGTCTCCATTGAAGAAAGCCTTCAAGAATATAGTGATTTGACAGATTTGTTATGGCCTTGTGCCAATGAAAAGAAGAGATCATTCTGTTATTTAATGTATACTTCTGGTTCAACTGGAAAGCCGAAAGGAGTGTGTGGCACTGAACAAGGTCTTTCAAATCGCTTTTTGTGGATGCAAGGATTGTATCCTCTGAATGGGCAGGAATCATTGTTGTTTAAAACATCAATCAGCTTCGTTGATCACCTGCAAGAATTTTTCAGTGCTATTTTGACAGCTTGTATGTTAGTTATTCCTCCTTTCAGTGTTCTCAAAGAAAACATATATTCTATAATAGATTTTCTTCAGGCTTATAGTATTAATAGGCTTACAGCTGTTCCATCRCTAATGAAGACAATTCTTCCTGGATTACAAACTCATGTTGGCCTGCGGGTTCAAAGKTCACTGAAATTACTTKTGCTAAGTGGTGAACTGTTTCCCYTGACCTTGTGGGAGAAGCTTTCAACTGTTTTACCAAACACATTTATCTTGAATTTATATGGAAGTACCGAGGTCTCAGGTGACTGTACATATTTTGATTGCAAGAGAATGCCACTGGTTTTGAAGGAAGATATGCTAACTAGTGTGCCAATAGGTTTACCAATTTATAATTGTGATGTTGTGCTTCTTTGTGAAAATGCCTCGTCAAAGGAGGGAGAGCTATATGTTGGTGGTTCCTGCATCTCTAGAGGCTACTATACTGAGTCTAATATGAAGTCTGAAAATTTTGTAAAATTGCCTCAAAGTTATTGGATGAATTCCATGAATGATTGCAAAAGCAAATTATACTTCAGAACTGGTGATTTTGTCAAACAGTTGTCAAGTGGTGACTTTGTATTTTTGGGAAGAAAAGACCGCATTGTAAAAATCAATGGTCATCGTATTGCCCTGGAAGAAATTGAAGATTTGTTAAGAAAGCATCCATATATAAATGATGCTGCTGTAATTTGTCGGAATATTGAAGAGCTTTTGCTTCTGGAAGCCTTTATAATATTAGAAGACAAGGAAAGATTGGACGAATCATTAATACCTGCAATTAGAAGTTGGATGATTAGCAAACTTCCATCGGCTGTGGTTCCTAATTATTTCATCTTCGTGGATTCATTTCCTGTGTCATCTAGTGGTAAAGTTAATTATGAGTTGTTGGTGGACTCAAGATTATTGACAATGAATGTCAAGGACAAGGTTGTTAACATTGACTGCAGCAGTCTTCTGCGACGAATTCAAAAGGCCTTTCATGATGCTTTAATGGTTGAAAAGGTTTGCAACGATGATGATTTCTTTACCATGGGTGGTAACTCTCTTTCTGCTGCACATGTTGCTCACAGTTTGGGGATYGACATGAGATTTCTTTATTACCACCCAAGTCCTTTTAAGCTTTGTATGGCTCTTCTTCAGAAAAGAGGATCCYGCGCTTTGCATAACAAGTTGGATGATTGTTTTGAACTAATTACAGAAAGACAAGATAACCATGTCTCATCCAATCATATTGAAAATTCTAATACCCATGAGTCATGGATGATTTCTAAAGGTAATGATGATAATTCTTTACCTTCTAAGCGCTTGAAGAGGGGTATTACAGATGTTATGTTGAGTGCTGATGAATCTTCCCCATGGCATTTCTCTCCAATATTTGAATCATCTTCATTTAGCCGATGCAACAAGGTGTTGCATAAAGGGCAGCCTGCAGTTACTGGTSCTCAGCAAACAACTTGGTTGGCAAATGCSCCAAGGGGCAGCAGAGGTCATATAAAGGACTGTTGGAAAGTTTACATGGAATCTTGTGTTGATGCTTCCCCAATGCTTGTGTCTAAAGGCTCAGACATTTATTTATTCATTGGATCTCATTCACATAAATTTCTCTGTATAAATGCCAGAAGTGGTTCTGTCCAGTGGGAGATCAAACTAGATGGACGCGTTGAATGTACAGCAGCAATTGTATCAGATTTCTCTCAGGTGGTTGTTGGATGCTACATGGGAAAAATTTATTTTCTAGATTTTTCAAGTGGAACCATCTGTTGGAGTTTTCAAACGTCTGGTGAGGTAAAGTCACAACCAGTTGTAGACACAAGAAGACATTTGATCTGGTGTGGCTCTCATGATCATAACTTATATGCGCTTGATTACAAAAATCATTGCTGTGTTTATAAACTACCTTGTGGAGGCAGTATATTTGGGTCACCTGTAATTGATGAGGTTCGCGGATTGCTTTATGTGGCTTCTACTGGTGGTAGAATTACAGCTATATCAATATCGGATTTTTCTTTTACTGTATTGTGGCTAAATGACTTGGAAGTCCCTGTCTTTGGTTCTCTGGGCATCACCGAAATTGGAACTGTAATATGTTGCTTAGTAGATGGCCATGTTCTTGCATTGGATCCAAACGGATCCACAGTTTGGAAGCAAACAACTGATGGACCTATATTTTCTGGGCCATGCATGCCTTCTACACTTCCTCATGAGGTGCTAGTATGCTCCAGAAAGGGAAGCGTGTACTCTTTTAAACCGGAGAATGGGGATTTATTATGGGAACAYAATGTTGGAGATCCAATAACTTCATCTGCTTATGTTGATGAGCACTTGCAGCTAGTCTCTGATGATGCCTCACATTCCTCAGACAGGTCAATCTCCATTTGTTCAAGTTCTGGAAGAATACACTTACTTAGAGAGAACCTGAATTCCTCCGATGACACAATTCTACGGAAAATTGATGTGCAGGAATTTGCAAGACTTGACTTGCTCGGCGATATATTCTCTTCGCCGTTAATGATTGGAGGCCGGATTTTCGTTGGTTGTCGGGACGATTACTTGCATTGTGTTACCCTTGAAATGCCAAAGCAACACGAAAGTTAA 3654 0.4089 MKAQSPEEEEEEETQTPRFCCLSHEFFRAASANPNKTAVIHASGVAHLSTRLRQTAHPFPPPASSNFNHDNISTLLEQRVESLSPPVYNGDRCFTYSHLLKAVDSLASRISSILLGADDPHLITPKPQALASGVCAAGDNAVNHEKGTIYAAENLETNVPSSESVVDSSEEYRPKIVGIYMPPSAEYIVAVLSVLRCGEAFLPLDPYWPKERLLSIVASSSADLIIGSKSSFGSELDELDESHWLVKSVSCPVLSVSIEESLQEYSDLTDLLWPCANEKKRSFCYLMYTSGSTGKPKGVCGTEQGLSNRFLWMQGLYPLNGQESLLFKTSISFVDHLQEFFSAILTACMLVIPPFSVLKENIYSIIDFLQAYSINRLTAVPSLMKTILPGLQTHVGLRVQXSLKLLXLSGELFPLTLWEKLSTVLPNTFILNLYGSTEVSGDCTYFDCKRMPLVLKEDMLTSVPIGLPIYNCDVVLLCENASSKEGELYVGGSCISRGYYTESNMKSENFVKLPQSYWMNSMNDCKSKLYFRTGDFVKQLSSGDFVFLGRKDRIVKINGHRIALEEIEDLLRKHPYINDAAVICRNIEELLLLEAFIILEDKERLDESLIPAIRSWMISKLPSAVVPNYFIFVDSFPVSSSGKVNYELLVDSRLLTMNVKDKVVNIDCSSLLRRIQKAFHDALMVEKVCNDDDFFTMGGNSLSAAHVAHSLGIDMRFLYYHPSPFKLCMALLQKRGSXALHNKLDDCFELITERQDNHVSSNHIENSNTHESWMISKGNDDNSLPSKRLKRGITDVMLSADESSPWHFSPIFESSSFSRCNKVLHKGQPAVTGXQQTTWLANAPRGSRGHIKDCWKVYMESCVDASPMLVSKGSDIYLFIGSHSHKFLCINARSGSVQWEIKLDGRVECTAAIVSDFSQVVVGCYMGKIYFLDFSSGTICWSFQTSGEVKSQPVVDTRRHLIWCGSHDHNLYALDYKNHCCVYKLPCGGSIFGSPVIDEVRGLLYVASTGGRITAISISDFSFTVLWLNDLEVPVFGSLGITEIGTVICCLVDGHVLALDPNGSTVWKQTTDGPIFSGPCMPSTLPHEVLVCSRKGSVYSFKPENGDLLWEHNVGDPITSSAYVDEHLQLVSDDASHSSDRSISICSSSGRIHLLRENLNSSDDTILRKIDVQEFARLDLLGDIFSSPLMIGGRIFVGCRDDYLHCVTLEMPKQHES* 1218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2867 1217 Gene3D - 138 551 IPR042099 -
Amo12g2867 1217 SMART ire1_9 1040 1070 IPR018391 -
Amo12g2867 1217 SMART ire1_9 870 902 IPR018391 -
Amo12g2867 1217 SMART ire1_9 1083 1113 IPR018391 -
Amo12g2867 1217 SMART ire1_9 911 944 IPR018391 -
Amo12g2867 1217 PANTHER EBONY 14 1211 - -
Amo12g2867 1217 Pfam PQQ-like domain 1001 1164 IPR002372 -
Amo12g2867 1217 Pfam PQQ-like domain 937 976 IPR002372 -
Amo12g2867 1217 Gene3D - 669 731 IPR036736 -
Amo12g2867 1217 SUPERFAMILY ACP-like 669 728 IPR036736 -
Amo12g2867 1217 ProSitePatterns Phosphopantetheine attachment site. 696 711 IPR006162 -
Amo12g2867 1217 CDD A_NRPS 173 649 - -
Amo12g2867 1217 SUPERFAMILY Acetyl-CoA synthetase-like 93 651 - -
Amo12g2867 1217 Pfam AMP-binding enzyme 176 557 IPR000873 -
Amo12g2867 1217 Pfam AMP-binding enzyme C-terminal domain 566 643 IPR025110 -
Amo12g2867 1217 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 863 1213 IPR011047 -
Amo12g2867 1217 ProSitePatterns Putative AMP-binding domain signature. 286 297 IPR020845 -
Amo12g2867 1217 Gene3D - 552 658 IPR045851 -
Amo12g2867 1217 Gene3D - 842 1021 IPR015943 GO:0005515
Amo12g2867 1217 Gene3D - 1022 1214 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2867 Amo-Chr12 114929754 114937227 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2867 279 663 Monolignol Biosynthesis Gene Families AT4G19010 23.940 6.08e-13 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2867 K00142 - gmx:100820175 1763.81