Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2864 ATGGAGTATCTTGAACTTCTTTTGCTTATTTCTTTTGTGTTAGCATGTATTCATCTTCTATTCTCCAACTTAGCAATGAAAACACCCAAAATTAAACTTCCACCAGGGCCTAAGCCTTTTCCTCTAATAGGAAACATTTTAGAACTTGGTACCCACCCTCATCTATCACTTTCTAGGCTTTCTCAAATTTATGGACCAATAATGACTCTTAAGCTTGGTAACATAACCACCATAGTTATTTCATCTCCACAATTAGCCAAAGAAGTGCTTCATAAACATGATAAAACCTTCTGTGACAGGCAAACCCCGGATACTCTTACGGCGATGGATCACCATAAAGTTTCGGTGATATGGTTGCCATTAAGAAAGAAGTGGAGGAATCTTAGGAGAATTTGCGCGGACAATTTGTTCTCAATTCAAAAGCTTGATTCTACGCAAGTTCTTCGGCAAAAGAAAGTCCAAGAACTTTTGGATTTTGTGAAAGAAAAAAGTGAAAAAGGCGAATCTTTAGATATGAGTAATGCGGCTTTTATAACCGTACTTAATTTCATATCAAACACTTTCTTCTCCATTGATTTGGCTCATTACGATTCCTTCAAGTCTCAAGAGTTCAAGGACATCGTTTGGGGGATTATGGAAGAAATTGGAAGGCCTAATGTTGTGGACTTCTTTCCAATGTTGAGGATGCTTGATCCACAAGGTACACGTGGAAGAATGAAAAGGTATTTCAAAAAGTTAATTAACTTTTTTGATGGGCTTGTAGAAGAAAGAGTGCAAAGGAGAGGTCTGGAAGGAGAATCAAATGGAAGAAAAGACTTGCTAGATTCCATGGTAGATCTCATGTTGGAAGATAATTCAGAATTGAGCCGATCTCAAGTGCTGCATTTATTAATGGATTTATTTAATGCTGGAATAGACACAACAAGCAGTATGATAGAATGGACAATGGCAGAACTTGTACGTAATCCAAAAGAATTAAAAAAAGTAAGAGAAGAGCTTCATCAAGTTCCTGGAAAAGAACAACAAATTGAAGAATCACATATTTCAAAGCTTCCTTTTCTAAGAGCAGTTGTGAAAGAAACGTTTCGCTTGCACCCACCAGCTCCATTACTACTACCACACAAGTCACCACAAGAGGACATTGAACTATGTGGTTTCATGGTGCCTAAAAATGCACAAGTTTTGGTCAATGTATGGGGCATGGGAAGAGATTCAAGTATTTGGACAAACCCAAATGAATTCATGCCTCAAAGATTCTTGGAGAGTAATATTGATTTTAGAGGCAATGATTTTGAGTTGATTCCTTTTGGAGCTGGAAGAAGAATTTGCCCTGGATTGCCATTAGCTTTTAGAAGTGTTCATATTGTGTTAGCTTCTCTTCTATATGGATATGATTGGAAACTCCCAAATGAATTAGAGGCAAAGGATATTGATATGTCTGAAAAATTTGGGATTACCTTGCACAAAGCCCAACCTCTCCAAATTATTCCCATAAAATCATAA 1503 0.3713 MEYLELLLLISFVLACIHLLFSNLAMKTPKIKLPPGPKPFPLIGNILELGTHPHLSLSRLSQIYGPIMTLKLGNITTIVISSPQLAKEVLHKHDKTFCDRQTPDTLTAMDHHKVSVIWLPLRKKWRNLRRICADNLFSIQKLDSTQVLRQKKVQELLDFVKEKSEKGESLDMSNAAFITVLNFISNTFFSIDLAHYDSFKSQEFKDIVWGIMEEIGRPNVVDFFPMLRMLDPQGTRGRMKRYFKKLINFFDGLVEERVQRRGLEGESNGRKDLLDSMVDLMLEDNSELSRSQVLHLLMDLFNAGIDTTSSMIEWTMAELVRNPKELKKVREELHQVPGKEQQIEESHISKLPFLRAVVKETFRLHPPAPLLLPHKSPQEDIELCGFMVPKNAQVLVNVWGMGRDSSIWTNPNEFMPQRFLESNIDFRGNDFELIPFGAGRRICPGLPLAFRSVHIVLASLLYGYDWKLPNELEAKDIDMSEKFGITLHKAQPLQIIPIKS* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2864 500 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2864 500 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2864 500 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2864 500 PRINTS P450 superfamily signature 443 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2864 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Amo12g2864 500 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 499 - -
Amo12g2864 500 SUPERFAMILY Cytochrome P450 34 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2864 500 Gene3D Cytochrome P450 22 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2864 500 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 499 - -
Amo12g2864 500 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2864 500 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2864 500 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2864 500 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2864 500 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2864 500 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2864 500 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2864 500 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2864 500 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2864 500 Pfam Cytochrome P450 34 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2864 Amo-Chr12 114870240 114875414 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2864 6 499 Cytochrome P450 AT2G45550 48.297 9.56e-180 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2864 - - gmx:100809483 674.855