Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2860 ATGTCAAGCACTTTGTTTTCCATGAATTTGGTTAATTTTGGTGGTTTTAAGTCTCAAGAATTCAAAGAAATAGTTTGTGGTATAAGTGAAGAAGCTGCAAAGCCTAATGTTGTGGATTTCTTTCCAATCTTGAGGATATTTGATCCACAAGGTGCACGTGCTAGAATGACCAAACATTTTAGGAAGATAATTTATATATTTGATGGTATTGTTGAAGAAAGATTGCGATTAAGGGCTCTAGACGAAATGGACACCAAGGAATACAAAGATGTGTTAGATTATTTGCTTGAAGTGATGTTGGAGGAAAATTCTCAAATAAGTCGCATCCATGTATTGCATTTACTTTTGGATCTATTTGTGGCTGGACTAGACACAACATCGATTACCATAGAATGGGCAATGGCAGAATTACTACGCAACCCAGAAAAAATGCAAAAATTGAAAGAAGAGCTTGAACATGTTCTTGGCAAGAATGAAAAACAAATTGAAGAATCACATATCTCAAATCTTCCTTTCCTAGGAGCTGTGGTGAAGGAAACTTTACGCTTTCATACACCAATCCCATTCCTATTGCCACACAAGTCACAACAGGATGTTGAACTATGTGGCTTCACTGTGCCTAAAAATGCACAAGTTTGGGTTAATGTATGGGCTATAGGGAGAGATTCAAGTATTTGGACAAATCCTAATGAATTCATGCCTGAAAGATTTTTGGAGAGTAAGATTGACTTTAAAGGTCAAGACTTTGAGTTAATTCCCTTTGGGGCTGGAAGAAGAATTTGTCCTGGATTACCATTGGCTTATAGGACTATACACATAGTGTTGGGGACTCTTGTTCATGGCTATGATTGGAAGTTAGTTAATGGGCAAAAGGCAAAGGACCTAGATATGTCTGAAAATTTTGGGCTTACCTTGCATAAAGCTCAATCTCTCCAAGCTATTCCCATAAAAACACAGCATTGA 963 0.3718 MSSTLFSMNLVNFGGFKSQEFKEIVCGISEEAAKPNVVDFFPILRIFDPQGARARMTKHFRKIIYIFDGIVEERLRLRALDEMDTKEYKDVLDYLLEVMLEENSQISRIHVLHLLLDLFVAGLDTTSITIEWAMAELLRNPEKMQKLKEELEHVLGKNEKQIEESHISNLPFLGAVVKETLRFHTPIPFLLPHKSQQDVELCGFTVPKNAQVWVNVWAIGRDSSIWTNPNEFMPERFLESKIDFKGQDFELIPFGAGRRICPGLPLAYRTIHIVLGTLVHGYDWKLVNGQKAKDLDMSENFGLTLHKAQSLQAIPIKTQH* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2860 320 Coils Coil 144 164 - -
Amo12g2860 320 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 318 - -
Amo12g2860 320 SUPERFAMILY Cytochrome P450 4 314 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2860 320 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 318 - -
Amo12g2860 320 Pfam Cytochrome P450 3 305 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2860 320 PRINTS P450 superfamily signature 121 138 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2860 320 PRINTS P450 superfamily signature 175 186 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2860 320 PRINTS P450 superfamily signature 252 261 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2860 320 PRINTS P450 superfamily signature 261 272 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2860 320 PRINTS E-class P450 group I signature 110 127 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2860 320 PRINTS E-class P450 group I signature 130 156 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2860 320 PRINTS E-class P450 group I signature 174 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2860 320 PRINTS E-class P450 group I signature 215 239 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2860 320 PRINTS E-class P450 group I signature 251 261 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2860 320 PRINTS E-class P450 group I signature 261 284 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2860 320 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 254 263 IPR017972 GO:0005506|GO:0016705
Amo12g2860 320 Gene3D Cytochrome P450 1 318 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2860 Amo-Chr12 114830289 114832006 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2860 1 319 Cytochrome P450 AT2G45570 47.664 1.52e-108 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2860 - - gmx:100779789 455.292