Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2845 ATGGAAGTTTTATCCACCATGTTGACTTTCATACCCTTTTCTTTTCTATGTCTCTTCTTAGGCTTATGTTTCATGATGTTAAAAGGAAAATCCATAGGTAACTCAAACTATGCCCCATGCAAAGGCACAGTGTTTAACCAACTCCTCCACTTCAAGAACCTCCATGACTACCATACAGAACTGGCCAAGACGAATCCGACTTTCCGGCTACTCACGCCGGATCAGAGCGAATTGTACACGGTGGACACGAGAAACGTGGAGCACATATTGAAAACAAAGTTTGATAAGTACTCAAAAGGGAAGTACAATCAAGATGTTTTGAGTGATCTTTTTGGTGAAGGGATTTTTGCTGTTGATGGTGAGAAGTGGAGGCAACAAAGGAAGCTTGCTAGCTATGAATTTTCCACAAGAGTTCTTAGGGACTTTAGTTGCTCTGTTTTTAGAAGGAATGCTTCTAAGTTTGTTAGAGTTTTATCTGAATTTTCTCATCAAGGTGTGGCTTTTGATTTGCAAGATTTATTAATGAGATCCGCTTTGGACTCAATTTGTGAAGTTGGGTTTGGAACAGAATTGAATTGCTTAGAAGAATCAAGCAAAGAAGGAGTTGAGTTCATGAAGGCCTTTGATGAATCAAATGCATTGATCTATTGGCGCTATGTTGATCCATTTTGGAAGATCAAAAGGTTCCTTAACATTGGTAGTGAAGCTACCCTTAAGAAAAAGGTTAAATTAATGGATGATTTTGTCCATGGAATAATTAAGGCCAGAAAAGCACAATTGACAGTTCAACAAGAAGAGTCTTCTTCTAATGTTAAAGAGGATATACTGTCAAGGTTTTTGATGGAGAGCAAGAAGGATCCAAAAACTATGACAGATAAGTATTTGAGGGATATAATTATGAACTTTATGTTAGCTGGAAAAGACTCGAGTGCAAACACTCTCACATGGTTCTTCTACATGCTTTGCAAGAACCCTCTTCTTCAGGAAAAGATTGCACAAGAAGTGAGAGATAATGTCACTTGTTACAGTAGCCATGAAGGAGAAGAAAACATTGATGAGTTTGTGTCCAATTTAACAGATGATACCATTGATAAAATGCATTATCTTCATGCTGCGTTGACAGAGACATTGAGACTCTACCCTGCTGTCCCTCTGGATGGAAGAACAGCAAATGAAGCAGACATTCTGCCAGATGGATACAAAGTGAAGAAGGGAGATGGAGTGTACTACTTAACATATTCTATGGGAAGAATGTCTTCCATTTGGGGTGAAGATGCTGAAGAATTTCTTCCTCAAAGATGGCTCCATCATGGAGTTTTTCAACCTCAATCTCCATTCAAATTCGTAGCTTTCCATGGTGGACCACGTATATGCTTAGGAAAGGAGTTTTCTTACAGACAGATGAAAATAGTGGTAATGGCTCTTCTACGCTTCTTCAGGTTTAAACTAGCAAATGAAACACAATGTGTGACTTATAAGGTCATGTTTACTCTTCAAATGGATAAGGGTCTCCCTCTCTATGCACTTCCAAGGTCATTAAAGTAA 1545 0.3858 MEVLSTMLTFIPFSFLCLFLGLCFMMLKGKSIGNSNYAPCKGTVFNQLLHFKNLHDYHTELAKTNPTFRLLTPDQSELYTVDTRNVEHILKTKFDKYSKGKYNQDVLSDLFGEGIFAVDGEKWRQQRKLASYEFSTRVLRDFSCSVFRRNASKFVRVLSEFSHQGVAFDLQDLLMRSALDSICEVGFGTELNCLEESSKEGVEFMKAFDESNALIYWRYVDPFWKIKRFLNIGSEATLKKKVKLMDDFVHGIIKARKAQLTVQQEESSSNVKEDILSRFLMESKKDPKTMTDKYLRDIIMNFMLAGKDSSANTLTWFFYMLCKNPLLQEKIAQEVRDNVTCYSSHEGEENIDEFVSNLTDDTIDKMHYLHAALTETLRLYPAVPLDGRTANEADILPDGYKVKKGDGVYYLTYSMGRMSSIWGEDAEEFLPQRWLHHGVFQPQSPFKFVAFHGGPRICLGKEFSYRQMKIVVMALLRFFRFKLANETQCVTYKVMFTLQMDKGLPLYALPRSLK* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2845 514 Pfam Cytochrome P450 48 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2845 514 PANTHER CYTOCHROME P450, FAMILY 704, SUBFAMILY A, POLYPEPTIDE 1 7 512 - -
Amo12g2845 514 PANTHER CYTOCHROME P450 7 512 - -
Amo12g2845 514 SUPERFAMILY Cytochrome P450 48 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2845 514 Gene3D Cytochrome P450 39 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2845 514 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2845 514 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2845 514 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2845 514 PRINTS P450 superfamily signature 458 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2845 514 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2845 514 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2845 514 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2845 514 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2845 514 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2845 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2845 Amo-Chr12 114694023 114699399 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2845 1 512 Cytochrome P450 AT2G45510 59.223 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2845 - - aprc:113851122 830.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2845 12 114694023 114699399 Amo12g2845 12 114694023 114699399 ECH
Amo12g2845 12 114694023 114699399 Amo02g0557 02 6953113 6957579 hybridization