Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2844 ATGGAAGAAGATAACTTGCAGCGGCAATGGTCCCTCAAAGACTTCGAGATCGGAAAACCTCTTGGCAGAGGAAAATTTGGCAGAGTCTACGTTGCGAGAGAAGTCAAGAGCAAATATGTAGTTGCATTGAAGATTATATTCAAGGAACAAATTGAGAAGTACAGACTTCACCATCAGCTAGGGAGGGAGATGGAAATACAATCCAACCTTCACCACCCGAACATCCTACGACTATACGGCTGGTTTCATGATCCAGAGCGTGTTTTCTTGATTCTTGAATATGCTCATAATGGTGAGCTCTACAAGGAGCTTAGAAAAAGAGGCCACCTCACTGAGATGCAAGCAGCCACGTATATTTTGAGTCTCACAGAGGCATTGGCATATTGTCATGAGAAGCATGTTATTCATAGGGATATCAAGCCAGAAAATTTGTTGCTTGACCATGAGGGTCGTCTTAAAATTGCAGATTTTGGTTGGTCTGTACAATCTAGGGGCAAGAGACACACTATGTGCGGAACATTAGACTACTTAGCTCCCGAAATGGTAGAAAACAAAGCTCATGATTATGCAGTCGATAACTGGACTCTGGGTATCCTTTGTTATGAGTTCCTCTATGGCGTTCCTCCATTTGAGGCCGAGAGTCAAGCTGATACCTTCAAAAGGATCATGAAGGTTGACCTATCCTTCCCTGCTACGCCAGTTGTTTCTTTAGAAGCAAAAAATCTGATTAGTCGGCTCTTGGTGAAAGACTCCTCAAGAAGGCTCTCGCTTCAGAAAATAATGGAGCATCCATGGATAATCAAGAATGCAAATCCCATGGGTAGCTGCACCTAG 834 0.4341 MEEDNLQRQWSLKDFEIGKPLGRGKFGRVYVAREVKSKYVVALKIIFKEQIEKYRLHHQLGREMEIQSNLHHPNILRLYGWFHDPERVFLILEYAHNGELYKELRKRGHLTEMQAATYILSLTEALAYCHEKHVIHRDIKPENLLLDHEGRLKIADFGWSVQSRGKRHTMCGTLDYLAPEMVENKAHDYAVDNWTLGILCYEFLYGVPPFEAESQADTFKRIMKVDLSFPATPVVSLEAKNLISRLLVKDSSRRLSLQKIMEHPWIIKNANPMGSCT* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2844 277 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 6 275 IPR030616 GO:0004672
Amo12g2844 277 CDD STKc_Aurora 14 266 - -
Amo12g2844 277 PIRSF ILK 2 270 - -
Amo12g2844 277 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Amo12g2844 277 Gene3D Transferase(Phosphotransferase) domain 1 99 275 - -
Amo12g2844 277 Gene3D Phosphorylase Kinase; domain 1 3 98 - -
Amo12g2844 277 ProSitePatterns Protein kinases ATP-binding region signature. 21 48 IPR017441 GO:0005524
Amo12g2844 277 Pfam Protein kinase domain 15 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo12g2844 277 SUPERFAMILY Protein kinase-like (PK-like) 8 270 IPR011009 -
Amo12g2844 277 ProSiteProfiles Protein kinase domain profile. 15 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo12g2844 277 SMART serkin_6 15 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2844 Amo-Chr12 114688877 114691422 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2844 1 271 CBL-interacting serine-threonine protein kinases AT5G25110 40.072 1.43e-64 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Amo12g2844 Pkinase 1.3e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2844 K08850 - gmx:100800111 511.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2844 12 114688877 114691422 Amo12g2844 12 114688877 114691422 ECH