Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2829 ATGGAAGCCAAGTCTCTTGAAGCTGTTCCCCCTTCACACAACACTTCTGGTGGACCCCAGAAGAAGATTGACATGGGACAAAAGATGGATGGTGGTGGTGGTGTTGGAGTGATCAAAGAAGAGAAGAAGAACACAACAAGTTTTGAAACACTGAAGAGAGCAGAAGAGGAAGAAGGAGGAACAATAAGAAAACCTGCTATGAACAAAGCATGGCAACAACAAGAAGAAGATAGGTGCTGTTGTTTATTGTTCACAGAAGCTCAAAGGCGTGAGCTTCATCATCAAGTTCTTACCTTCAACTACTTTGCTTATAATCTCCCTCTTCCTCTTCCTCTTCCTCTCCCTCACCCTCATCATCACCTTGTGCTACCCTTTGGTTCTGGCTTTGGTGTTTTTCATAAGCAATTTCCAAGCTATATGTCAGGAGAATACAATCACTACCAATGTTTTGACTATGGAAGTATGATGGATCCTGAACCGAATAGGTGTAGAAGAACCGATGGAAAGAAATGGAGGTGCAGCAAGAACACAGTACCTTATCATAAGTATTGTGAACGACACGTGCACAGAGGCCGGAACCGTTCAAGAAAGCCTGTGGAAACATCCAAAGTTGTTAACTCAAATTCGATAACAAAGCCTTGTAGCAAGCTACATACTACCGTAGCTTCAAACACAAAATCTGCTGTTTCAATTCCAACACCTAAGGTAACAAACTTTGGCAACAGGACATCGGTTGCTTCGGATAACAGAAGTAGCCGAGATTTATGCAAGAAGGATAACCAGATCAAGAACTGTGTCGGCTACAGTATCAGTGTTATGAGTAGTGGTAAAGGAAGTGTTACCAATGATAGTAATTGCATCTCTGCCGGCATAGGCTTCTCCCCAAGGAGTGTTCTCCAAGTTTCTGGTTGCAATAGTTCACACCACAACTACACAAACAGTACAGAGCTTGAACCAGGCAGGTGCCGGAGAACAGACGGCAAGAAGTGGCGGTGCAAGAGCGCTGTTCTACCTGGTCAGAAGTATTGCACCACTCACGTGCACAGAGGAGCTAAAAGGCGTTGTTCCACAGATCATGAGCCAGTCACTACTCCTACTCCTACTCCTCGCTATGCCAATACCAATTCTCGGCCGATTTACTCTGCCGCGAACAGGACAACGATAACCGAAGCTCGGAAAACAGTTTGCACAGTTCCTAACACAAAACTTTCTATGTCAATCCCAGCAAGTGCACCATTGAGACACAACAATGGGAAGAGTCCTAATAGGAGCAGTGACACAGACACCACCATCACTGACACCATCAATGAGTGTAGCTATGCTTCTTTCTAA 1332 0.4467 MEAKSLEAVPPSHNTSGGPQKKIDMGQKMDGGGGVGVIKEEKKNTTSFETLKRAEEEEGGTIRKPAMNKAWQQQEEDRCCCLLFTEAQRRELHHQVLTFNYFAYNLPLPLPLPLPHPHHHLVLPFGSGFGVFHKQFPSYMSGEYNHYQCFDYGSMMDPEPNRCRRTDGKKWRCSKNTVPYHKYCERHVHRGRNRSRKPVETSKVVNSNSITKPCSKLHTTVASNTKSAVSIPTPKVTNFGNRTSVASDNRSSRDLCKKDNQIKNCVGYSISVMSSGKGSVTNDSNCISAGIGFSPRSVLQVSGCNSSHHNYTNSTELEPGRCRRTDGKKWRCKSAVLPGQKYCTTHVHRGAKRRCSTDHEPVTTPTPTPRYANTNSRPIYSAANRTTITEARKTVCTVPNTKLSMSIPASAPLRHNNGKSPNRSSDTDTTITDTINECSYASF* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2829 443 Pfam WRC 318 354 IPR014977 -
Amo12g2829 443 Pfam WRC 158 200 IPR014977 -
Amo12g2829 443 PANTHER - 302 422 IPR031137 GO:0005634|GO:0006351|GO:0032502
Amo12g2829 443 PANTHER - 51 237 IPR031137 GO:0005634|GO:0006351|GO:0032502
Amo12g2829 443 ProSiteProfiles WRC domain profile. 157 201 IPR014977 -
Amo12g2829 443 ProSiteProfiles QLQ domain profile. 83 118 IPR014978 GO:0005524|GO:0005634|GO:0006355
Amo12g2829 443 PANTHER GROWTH-REGULATING FACTOR 9 51 237 - -
Amo12g2829 443 PANTHER GROWTH-REGULATING FACTOR 9 302 422 - -
Amo12g2829 443 MobiDBLite consensus disorder prediction 354 376 - -
Amo12g2829 443 MobiDBLite consensus disorder prediction 1 44 - -
Amo12g2829 443 MobiDBLite consensus disorder prediction 360 376 - -
Amo12g2829 443 ProSiteProfiles WRC domain profile. 316 361 IPR014977 -
Amo12g2829 443 MobiDBLite consensus disorder prediction 406 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2829 Amo-Chr12 114627680 114630781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2829 87 358 GRF Transcription Factor Family AT2G45480 31.845 1.38e-35 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2829 - - ahf:112753949 840.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2829 12 114627680 114630781 Amo12g2829 12 114627680 114630781 ECH