Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2819 ATGGATTGTGATGAAAATAATCAACAAAGAGGTGGGCCTTGTGGAGCTTGCAAGTTCTTGAGAAGGAAGTGTGTGAAGGGATGCATATTTGCACCATACTTTGACTCAGACCAAGGAACTTCACACTTTGCTGCGGTGCATAAGGTTTTTGGTGCAAGCAATGCATCTAAGCTTCTCATGAGGATCCCTCCTCATAAGAGGCTTGATGCTGTTCTCACTCTTTCTTATGAGGCTCTTTCTAGGGTTAGAGACCCTGTTTATGGTTGTGTTGCTCATATCTTTGCTCTTCAACAACAGGTTGTGAACTTGCAAGCAGAATTAACATATGTTCAGGCCCGTCTTGCTACAATGCATCGCATCCCTATAGCTGCTGCTGCTGCTTCACCACCAACTCTTCATTCATCATCATCCTTAGATCACTTGGCATCATCAAATGCTGACTTGCAAAATGCCTCTAACAATATGGGCATGAACTTTAATCCTCCTCCTCAGCCACCACCACACTCAACACCATTAGAATCAAGTATCTTCATCAACTCATCAGATGAACCACCACCACCACTACTACTTGAGGATGGGGATCTTCAAACTTTGGCAAGAGAATTTGTCACTAGGTACTTGCCCGGAGTAAGATTCCAGCCATCTAATAATTCTCACTAA 660 0.4348 MDCDENNQQRGGPCGACKFLRRKCVKGCIFAPYFDSDQGTSHFAAVHKVFGASNASKLLMRIPPHKRLDAVLTLSYEALSRVRDPVYGCVAHIFALQQQVVNLQAELTYVQARLATMHRIPIAAAAASPPTLHSSSSLDHLASSNADLQNASNNMGMNFNPPPQPPPHSTPLESSIFINSSDEPPPPLLLEDGDLQTLAREFVTRYLPGVRFQPSNNSH* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2819 219 PANTHER LOB DOMAIN CONTAINING PROTEIN 7 208 - -
Amo12g2819 219 PANTHER LOB DOMAIN-CONTAINING PROTEIN 19 7 208 - -
Amo12g2819 219 ProSiteProfiles LOB domain profile. 12 114 IPR004883 -
Amo12g2819 219 Pfam Lateral organ boundaries (LOB) domain 13 111 IPR004883 -
Amo12g2819 219 MobiDBLite consensus disorder prediction 149 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2819 Amo-Chr12 114381723 114386627 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2819 11 216 AS2 family AT4G00210 54.054 6.01e-71 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Amo12g2819 LOB 5.7e-36 No_clan