Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2808 ATGATTGTGTTGTACTCTTATTGGTTAAGCTCATGCTCATGGCGTATCCGCTTTGCTTTGTGCCTCAAAGGGATTCCTTATGAGTATAAAGCAGTGGATCTTGTAAAAGGGGAACAGTTTAGTCCAGAGTTTGAGAAATTGAACCCTCTCCATTGTGTTCCGGTATTAGCTGATGATCATGTGGTGGTTTCAGACTCTTATGCAATATTTCTGTATTTGGAGGAAAAGTATACTCAAAAGCCACTTTTGCCAGTTGATCCTCAGATCCGAGCTCTCAATCTTCAGATAGCAAGTATGATTAACTCCAGCATTCAACCTTATCATATGATTAGTGCTTTGAAAGATATGGAGAAAATGTTTGGTGCTGAAACAAAACAGTGGGCACAATATAAGATTGACAAAGGTTTCTTGGCTCTTGAGAAGTTATTGAAGGATGTTGCTGGAAAATATGCAACAGGGGAACATATCTACATGGCTGATGTATTCTTGGCTCCACAGATTATGCAAGCAGTTAATAGGTTTGATATTGATATGTCCAAATACCCTACTCTGAGGAGGTTGTCTGAAACATACAAAGGTTTAGCAGAGTTCTATGCCTCATCACCCCAAAGTCAACCTGATGCTTGCATTAGTCAATAG 639 0.3944 MIVLYSYWLSSCSWRIRFALCLKGIPYEYKAVDLVKGEQFSPEFEKLNPLHCVPVLADDHVVVSDSYAIFLYLEEKYTQKPLLPVDPQIRALNLQIASMINSSIQPYHMISALKDMEKMFGAETKQWAQYKIDKGFLALEKLLKDVAGKYATGEHIYMADVFLAPQIMQAVNRFDIDMSKYPTLRRLSETYKGLAEFYASSPQSQPDACISQ* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2808 212 Gene3D - 83 209 - -
Amo12g2808 212 CDD GST_N_Zeta 2 74 IPR034333 -
Amo12g2808 212 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 81 IPR004045 -
Amo12g2808 212 PANTHER GLUTATHIONE S-TRANSFERASE 2-LIKE ISOFORM X1 2 209 - -
Amo12g2808 212 Gene3D Glutaredoxin 4 79 - -
Amo12g2808 212 PANTHER MALEYLACETOACETATE ISOMERASE 2 209 - -
Amo12g2808 212 SFLD Glutathione Transferase (cytosolic) 3 188 IPR040079 -
Amo12g2808 212 SUPERFAMILY Thioredoxin-like 1 84 IPR036249 -
Amo12g2808 212 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 210 IPR010987 -
Amo12g2808 212 TIGRFAM maiA: maleylacetoacetate isomerase 4 208 IPR005955 GO:0003824|GO:0005737|GO:0009072
Amo12g2808 212 SUPERFAMILY GST C-terminal domain-like 81 207 IPR036282 -
Amo12g2808 212 Pfam Glutathione S-transferase, N-terminal domain 4 81 IPR004045 -
Amo12g2808 212 SFLD Main (cytGST) 3 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2808 Amo-Chr12 114253811 114257759 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2808 4 208 Glutathione S-transferase Gene Family AT2G02380 50.485 1.39e-70 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2808 K01800 - gmx:100796296 342.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2808 12 114253811 114257759 Amo12g2808 12 114253811 114257759 ECH