Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2780 ATGGCTGCAGGTATGCTTAGTTGCGTGGAGTCTGAGTTGCAGGAAACATTATCCGGCTTGTCCCGGCAGGCGGGTCTAGTAACAACGTTGGAGAGAACATTAAAGATGTGTGCATCATTGAGAACTCTAGTTGAAGATGCGGAACATAAACAACTGTTTGATATTCAGGCGAAGCTGTGGATGCAACGCACTGTGGATATATGCTATGACATGGTGTACATATTGGACGAACTGAATCTGCAAGAGGTTGGAAAGGTACGTGTTTTTAGCCATCAGTTCTCTTTCTTCAATCCTTTCCGACGTCATCACAAGGGTATATATGCTCTTGGGCTGCGTCATAATAAGCTGAGAGAAATCATCAGTGGATTTGAAAGCCTAGCAGAGGAAGCACGTGTGTATGGAATTCGAAGGTCTGCTAAACTGGAGAACTGGAATATTTGTGAGCGGCAATTCAATCCTCTTTTTGAGTATGAGGTTTATGGCAGAGAAGTAGAAAGAGAATTTTTGGTCAGCAACTTATTAGACGGCAACGATGATATTCGAGTGATTTTCATTGAAGGAATGGCTGGAATGGGAAAGACTACACTGGCCAAACTTGTGTACCAAAATTATCAAGTGAAGGCTTATTTTGGTTATAAGGCATGGGTATCTGTCTCGGAAGAGTTCAATCTCAGAAAAATTGTCATGGCCATCCTAGGGTTTTCAACTTCTGATCTAATGAATGATGTTGAAATGGAATTACTGGTACTCATATTTCGTCGAGTTACTGCCGGAGAAAGATGTCTCTTTGTTCTGGACGACGTAGCCAACTATACTCTTGAGCACTGGCAACTAATAAGGGAGTTTTTCAATAATTTTTGTGTTGCGGGAAGTAGAATTTTGGTAACCACACGGAAGAAATCTGTCCCATACCGACTGGGATTCCCATCGGATGTTGTCGCATATCTGCTGCCACTAACTGAAGAAGATTCTTGGGCAATTGTTCGGGATACTGCATTTGGTCCACTAACACACACTGATTTCCGATACCCGAGAATGAAAATCACAGAGAAATGTCGTAACGTGCCGCTATATCTGAGATCTATTGGTGCTATCATGCGTTACAAACACAGCGAAATAGAATTTCGAGAGATATTGGAAAGTCAGATATGGGAGGTAGCACACGAAAATCAAATGGGGCCTTTCTTGATTATGCTCTATTGTCAACTCCCCTCTTATTTGAAACAATGCTTATTGTATTGTTCCATCTTTCCCAAGGATCACATAATCGTTATAGATCAACTGATCCGATTATGGATGGCACAGGGTTTTATTCACACGGAAGAACAAGGCCAGAGAATATTTAATGGGTTGTTGGGCTATTCCATCTTCAATGAAGTTACACTACATGGTACTCCGGGTTCCACATGCCGATTAGAGGGCGGAATCAGCAGTCTCAGCCACGCTATCGCAGAGAACGAATATCGCAGAATGCTTCTTGATAGTGGGGACGAACCTATAGAAGACCATGATCTTCCCAGGAATTGTCGCCATTGCACTCTTACTATTGCCACTCACACTTGTTTACCAGAGTCCATTCCCAATGCAGAGAAACTCTGCACTTTGATGATTTTGTCTGAGTATTCCTCAGTAGATGCAACAAACCTTTCTAGTCTGCTAAGTAATTTGAGGAGGCTCAGGGCACTGATCTTGAGCTCTTGTTCCATACAAGAACTTCCAACAAAGGTAGGAAAATTGTTTCATCTAAGATACCTTGACTTGTCTTTCAATCATGATTTAAAGCGCTTGCCTGGAGTAATATGCAATCTGCTCAATCTTCAAACTTTAAATCTCAATGGATGTCGTAGTCTTCAGAAACTACCCAAAGGTATCGGAAAATTGATCAAGCTACGGCATCTTGAGATTCTTTGGACAACCAGTCTTACTTACTTACCAAAAGGGATTGCATGTTTAACCTCGCTCAGAACCTTAAGCCGTTTCTTTGGGAATTCTCTTGTTGGAAGCAAAGCATGCAACATTGGAGACTTGGAAAAGCTGAACAATATCCAAGGGAATATCACCATAGATGGGTTGGGAGCTGAAACTGATGCTTCTGATGCTGAAAGAGCAGGTCTAGAGAATAAGAAAGGTTTGCGTGGCTTAGAGCTCTGGTTTACTGCTCCGGGAGCCGGTACCAACGATGAAAGGGTACTTGGAGCTTTGAAAGCACCTCCTGAATTGGAAGATCTCGGGATATTTTACTACAGAGGAAATTTGTTCCCCACTTGGATGATAGCACTGCAGAAGCTTACACATCTAACCCTTGCTGATTGTGAGAAATGCAGTGTTCTTCCCAGGCTTGGAGAACTTTCATCCCTTGAATCACTTAAAATAATCAATATGCCCAGTATAAAGAAGGTGGTGGATTCTGAATTTCTGGGAACAGAATCAACTGATGCATTTCCAAAGCTTAAAACACTTTCCTTCCAGAAACTGGATAATTGGGAAGAGTGGGTTGGACTAGGTGATGATGGCGTCCAAGCAAATTTTATGCCTTTGCTTTATTCTTTGTCAATTGTAAACCGCAGAAAGCTAAAGGCAATTCCGGACTACATAAAGCTGAAGAGAAATGAGAGGTCTTCATTTCAAACTAACATTAAAAAATGTCCTTCTCTTGAGCAAACACACTATCAGTAA 2676 0.4182 MAAGMLSCVESELQETLSGLSRQAGLVTTLERTLKMCASLRTLVEDAEHKQLFDIQAKLWMQRTVDICYDMVYILDELNLQEVGKVRVFSHQFSFFNPFRRHHKGIYALGLRHNKLREIISGFESLAEEARVYGIRRSAKLENWNICERQFNPLFEYEVYGREVEREFLVSNLLDGNDDIRVIFIEGMAGMGKTTLAKLVYQNYQVKAYFGYKAWVSVSEEFNLRKIVMAILGFSTSDLMNDVEMELLVLIFRRVTAGERCLFVLDDVANYTLEHWQLIREFFNNFCVAGSRILVTTRKKSVPYRLGFPSDVVAYLLPLTEEDSWAIVRDTAFGPLTHTDFRYPRMKITEKCRNVPLYLRSIGAIMRYKHSEIEFREILESQIWEVAHENQMGPFLIMLYCQLPSYLKQCLLYCSIFPKDHIIVIDQLIRLWMAQGFIHTEEQGQRIFNGLLGYSIFNEVTLHGTPGSTCRLEGGISSLSHAIAENEYRRMLLDSGDEPIEDHDLPRNCRHCTLTIATHTCLPESIPNAEKLCTLMILSEYSSVDATNLSSLLSNLRRLRALILSSCSIQELPTKVGKLFHLRYLDLSFNHDLKRLPGVICNLLNLQTLNLNGCRSLQKLPKGIGKLIKLRHLEILWTTSLTYLPKGIACLTSLRTLSRFFGNSLVGSKACNIGDLEKLNNIQGNITIDGLGAETDASDAERAGLENKKGLRGLELWFTAPGAGTNDERVLGALKAPPELEDLGIFYYRGNLFPTWMIALQKLTHLTLADCEKCSVLPRLGELSSLESLKIINMPSIKKVVDSEFLGTESTDAFPKLKTLSFQKLDNWEEWVGLGDDGVQANFMPLLYSLSIVNRRKLKAIPDYIKLKRNERSSFQTNIKKCPSLEQTHYQ* 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2780 891 PRINTS Disease resistance protein signature 182 197 - -
Amo12g2780 891 PRINTS Disease resistance protein signature 255 269 - -
Amo12g2780 891 PRINTS Disease resistance protein signature 352 366 - -
Amo12g2780 891 PRINTS Disease resistance protein signature 601 617 - -
Amo12g2780 891 Pfam Rx N-terminal domain 20 82 IPR041118 -
Amo12g2780 891 Gene3D - 396 478 IPR036388 -
Amo12g2780 891 Gene3D Ribonuclease Inhibitor 500 891 IPR032675 -
Amo12g2780 891 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 414 IPR027417 -
Amo12g2780 891 Pfam NB-ARC domain 171 380 IPR002182 GO:0043531
Amo12g2780 891 Gene3D - 146 306 IPR027417 -
Amo12g2780 891 Pfam Leucine rich repeat 557 615 IPR001611 GO:0005515
Amo12g2780 891 SUPERFAMILY L domain-like 506 883 - -
Amo12g2780 891 PANTHER OS05G0414200 PROTEIN 40 865 - -
Amo12g2780 891 PANTHER DISEASE RESISTANCE PROTEIN RP 40 865 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2780 Amo-Chr12 113760806 113763481 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2780 524 657 WRKY Transcription Factor Family AT4G12020 34.328 1.01e-10 63.9