Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2767 ATGGCTATATCATCCACTTGCATTATTTTGATATTCGTATCATTTGTGTTTTTAGTTGGCATCGCCACTACTGCTGGAACTCACAAATTGTCAGCCTTAGATGAAGAAGCCAATGCTATGCATTCAATTAGTAAAGAGTTGTGGAGTAACCAACATAATAATGTCTCAAACCGTTGCAACTGGCCCGGAGTCAACTGCAACAAAGCTGGAAGTATAACATTGCTTTCACCTCCAACTCCAAGTAATTTCACCGACGAGTTCAGGACACAACTCTGCTCTTTGAAACTAAACTTTTCAGTGTTTCAAAATCTAGTCCATCTAGATCTCAGTGAAATGGGGTTATGTGAGTTCCCTAAACTAAGTGGTCTTAAGAAGCTACAACATCTCAACCTATCATACAACTATTTTGAAGGTGAGCTTCCTTTTACATTATTGGACAATCTAACTCAACTTGTGGTGTTGGACATTTCTAACAATTATATTAGTGGTACAATTCCACAAGAACTAAGCAAGCTGGAGAGACTTGTCATGTTGGACTTGAGTGCCAACAGCTTCGATGGAAGCATTCCATTGATCTTGGGTCAAATGAACAGCCTCACACACATGAAACTTTCCAATAATCTCCTGTATGGGGATCTTCCTTTCACACTGGCAAATCTAACTCAACTTCTTGTGTTGGACCTTTCCCAAAACAAACTTATCCTCCTAACTGTTATGAGTGCCAACACCATGGTGGCAGCATCGAATTCCTCGTCCTTGAACGCGGAACAAAAGGCCTTGCTCCATATCGGGTGGACGGAAGGTCGCAACATCTCAAAACATTGTAACTGGACTGGTATTGTGTGCAATGAAGCTGCAAGTGTCATAGAGATTTCAACAAGGCGTTATTTTGTTATCCCTCCATCTGAATTGAGGAACTTCAATTTTACTGCATTCCCCAATTTGATCCGTCTAGAACTGAGTGGCATGAGACTCAAGGGAATTATTCCTACTGAAATAAGCACTCTTACAAAGCTTATGTACCTTGATCTTTCCTGTAACTATCTTGAAAGTGGGTTACCTACCTCAATCTCAAATCTCACTCAACTTATAACACTTAATGTTTCTAACAACTTTCTCAGTGGTGGTATTCCATCTACTTTTGGGCACCTCAAGTATTTGGTTGAACTCTCCCTAGACTCGAACCAACTTCAACATCCCATTCCTAAAGACTTGGGGAACTTGAAGCATTTAGAGCATTTGTCTCTTTCAAATAACTCATTCAATTGTTCAATCCCTCCCTCTATGGGGCAATTGGATAAATTGAAATTTCTCTCCCTTGGTTCGAACCATATCGAAGGTCCCATCCCCATAGAACTAGAGCACTTGGTCAATCTGGAAGTTTTAGACCTTTCTCACAACAAGATTTCTGGTGTTATACCATCTTGGATTGGACAACTCTCTAGACTTTCAATACTAGATGTTTCCAACAATAGACTTGAGGGACCAATTCCATTTGGTATTCTAAACCATTGCAATTATGTGCAACTAAGTAATAATTCTATAAGTGGATCCCTTCCTTCTCAAATGGGCAATCTTTCTTATCTTGACCTTAGTTACAATAACCTCTCCGGAAACATACCTGTGGGAATCTATTCTGTATCCTACCTCAACATCTCTTACAATTCCTTTGATTTGGATCACCAACTTTGTGATCTTCTGAAAGACTCATTGATTGGTAATAATCCCCCTTGCTATTCTGCAACTCATGATCACTCAAGTCCTATTCTCGCAGTAATCATAGTGTGCATCTTATATGGCATATGCATTTCAATAGTATTTGTATGCCTAGATTTCTGGTGTCCATTCCAAAATGAGTCCAAAGATGATAATCAAAGGAACAATGGAGATTTCGTTTCAATTAGGAACTATGATGGTAAAATTGCATTTAAAGACATAATTAAAGCCACAGAAGACTTTGATATAAGGTATTGCATTGGAACAGGTGCTTATGGAAGTGTCTACAAAGCACAGCTTCCTAGTGGCAGAAATGTTGCACTAAAGAAGCTTCACAATACAGAGTCTGAAAATCCATCATTTTACAAGAGTTTTAGCAATGAGGTCAAGGTCTTGACAGAAATCCGCCACCGCAACATCATTAGGCTTTATGGTTTCTGTTTGCACAACGGCTGTATGTTTTTGGTGTATGAGTATATGGAAAAGGGAAGCTTGTTCTATAACCTAGCCATTGATGAAGAAGCTCAAGAGCTGAACTGGAATTTTGGTACAGCTAAACTACTTTCTTCTGATTCATCTAATCAAACTCTATTAGCTGGCACTCCTGGATACATTGCTCCAGAGATGGCTTATAACATCAAYGTGACAACAAAATGTGATGTTTATGRTTTTGGTGTGGTGACTTTGGAAACAATAATGGGCGAACACCCTAAGGAACTAATTTCCAATGTGTCAAAACCATCTGCTCCAAAGATCATGCTCAAAGATATACTGGATTCACGTATTCGATTGCCTTTTCTTCGAAAAGAMATGCAGGATATTGTACTTGTTGTAACATTAGCACTAGCATGCTTRCATCCCAACCCAACATCAAGACCTTCAATGCAGGACATAGCTAATGAGCTTTTGTTTTCAAACTCGCCATTGCTTTGGCATTTTGATGGCATTTCAATCCACCAACTTGTGAATCAAGAAATATATGCAATAGGTAAAACTTAG 2715 0.3897 MAISSTCIILIFVSFVFLVGIATTAGTHKLSALDEEANAMHSISKELWSNQHNNVSNRCNWPGVNCNKAGSITLLSPPTPSNFTDEFRTQLCSLKLNFSVFQNLVHLDLSEMGLCEFPKLSGLKKLQHLNLSYNYFEGELPFTLLDNLTQLVVLDISNNYISGTIPQELSKLERLVMLDLSANSFDGSIPLILGQMNSLTHMKLSNNLLYGDLPFTLANLTQLLVLDLSQNKLILLTVMSANTMVAASNSSSLNAEQKALLHIGWTEGRNISKHCNWTGIVCNEAASVIEISTRRYFVIPPSELRNFNFTAFPNLIRLELSGMRLKGIIPTEISTLTKLMYLDLSCNYLESGLPTSISNLTQLITLNVSNNFLSGGIPSTFGHLKYLVELSLDSNQLQHPIPKDLGNLKHLEHLSLSNNSFNCSIPPSMGQLDKLKFLSLGSNHIEGPIPIELEHLVNLEVLDLSHNKISGVIPSWIGQLSRLSILDVSNNRLEGPIPFGILNHCNYVQLSNNSISGSLPSQMGNLSYLDLSYNNLSGNIPVGIYSVSYLNISYNSFDLDHQLCDLLKDSLIGNNPPCYSATHDHSSPILAVIIVCILYGICISIVFVCLDFWCPFQNESKDDNQRNNGDFVSIRNYDGKIAFKDIIKATEDFDIRYCIGTGAYGSVYKAQLPSGRNVALKKLHNTESENPSFYKSFSNEVKVLTEIRHRNIIRLYGFCLHNGCMFLVYEYMEKGSLFYNLAIDEEAQELNWNFGTAKLLSSDSSNQTLLAGTPGYIAPEMAYNINVTTKCDVYXFGVVTLETIMGEHPKELISNVSKPSAPKIMLKDILDSRIRLPFLRKXMQDIVLVVTLALACLHPNPTSRPSMQDIANELLFSNSPLLWHFDGISIHQLVNQEIYAIGKT* 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2767 904 Gene3D Ribonuclease Inhibitor 190 245 IPR032675 -
Amo12g2767 904 Gene3D Phosphorylase Kinase; domain 1 616 731 - -
Amo12g2767 904 ProSiteProfiles Protein kinase domain profile. 653 904 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo12g2767 904 PRINTS Leucine-rich repeat signature 480 493 - -
Amo12g2767 904 PRINTS Leucine-rich repeat signature 459 472 - -
Amo12g2767 904 ProSitePatterns Protein kinases ATP-binding region signature. 659 681 IPR017441 GO:0005524
Amo12g2767 904 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 251 501 - -
Amo12g2767 904 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 40 234 - -
Amo12g2767 904 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 251 501 - -
Amo12g2767 904 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 753 893 - -
Amo12g2767 904 SUPERFAMILY L domain-like 273 556 - -
Amo12g2767 904 SMART LRR_sd22_2 336 362 - -
Amo12g2767 904 SMART LRR_sd22_2 480 495 - -
Amo12g2767 904 SMART LRR_sd22_2 384 410 - -
Amo12g2767 904 SMART LRR_sd22_2 432 455 - -
Amo12g2767 904 SMART LRR_sd22_2 456 474 - -
Amo12g2767 904 SMART LRR_sd22_2 148 171 - -
Amo12g2767 904 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 40 234 - -
Amo12g2767 904 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 442 752 - -
Amo12g2767 904 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 753 893 - -
Amo12g2767 904 Pfam Leucine rich repeat 454 493 IPR001611 GO:0005515
Amo12g2767 904 Pfam Leucine rich repeat 338 397 IPR001611 GO:0005515
Amo12g2767 904 Pfam Leucine Rich Repeat 125 141 IPR001611 GO:0005515
Amo12g2767 904 Pfam Leucine Rich Repeat 410 428 IPR001611 GO:0005515
Amo12g2767 904 ProSiteProfiles Leucine-rich repeat profile. 458 480 IPR001611 GO:0005515
Amo12g2767 904 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 442 752 - -
Amo12g2767 904 Gene3D Transferase(Phosphotransferase) domain 1 739 879 - -
Amo12g2767 904 Gene3D Ribonuclease Inhibitor 29 189 IPR032675 -
Amo12g2767 904 Gene3D Ribonuclease Inhibitor 500 576 IPR032675 -
Amo12g2767 904 Gene3D Ribonuclease Inhibitor 400 499 IPR032675 -
Amo12g2767 904 Pfam Protein kinase domain 753 873 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo12g2767 904 Pfam Protein kinase domain 658 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo12g2767 904 Gene3D Ribonuclease Inhibitor 246 399 IPR032675 -
Amo12g2767 904 SMART LRR_typ_2 148 172 IPR003591 -
Amo12g2767 904 SMART LRR_typ_2 123 147 IPR003591 -
Amo12g2767 904 SMART LRR_typ_2 408 432 IPR003591 -
Amo12g2767 904 SMART LRR_typ_2 480 504 IPR003591 -
Amo12g2767 904 SMART LRR_typ_2 220 242 IPR003591 -
Amo12g2767 904 SMART LRR_typ_2 336 359 IPR003591 -
Amo12g2767 904 SMART LRR_typ_2 456 479 IPR003591 -
Amo12g2767 904 SMART LRR_typ_2 523 547 IPR003591 -
Amo12g2767 904 SMART LRR_typ_2 360 383 IPR003591 -
Amo12g2767 904 SUPERFAMILY Protein kinase-like (PK-like) 639 876 IPR011009 -
Amo12g2767 904 SUPERFAMILY L domain-like 40 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2767 Amo-Chr12 113479437 113485151 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2767 123 784 Receptor kinase-like Gene Family AT4G08850 31.774 1.16e-91 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Amo12g2767 Pkinase 7.3e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2767 - - ahf:112730550 1330.85